FFCP PHASE1:Hg19::chr12:53496953..53496965,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:53496953..53496965,+
|short_description=p2@SOAT2
|description=CAGE_peak_2_at_SOAT2_5end
|association_with_transcript=-308bp_to_NM_003578,uc001sbv.2,uc009z...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8435 | |EntrezGene=8435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11178 | |HGNC=11178 | ||
|TSSclassifier=strong | |||
|UniProt=O75908 | |UniProt=O75908 | ||
|association_with_transcript=-308bp_to_NM_003578,uc001sbv.2,uc009zms.2_5end | |||
|cluster_id=chr12:53496953..53496965,+ | |||
|description=CAGE_peak_2_at_SOAT2_5end | |||
|id=chr12:53496953..53496965,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.44e-38!52;CL:0000791!3.19e-38!18;CL:0000789!3.19e-38!18;CL:0002420!3.19e-38!18;CL:0002419!3.19e-38!18;CL:0000790!3.19e-38!18;CL:0000542!1.07e-37!53;CL:0000051!1.07e-37!53;CL:0000084!1.93e-34!25;CL:0000827!1.93e-34!25;CL:0000625!4.24e-29!11;CL:0002087!2.53e-16!119;CL:0002031!5.99e-13!124;CL:0000738!9.56e-13!140;CL:0000037!5.01e-09!172;CL:0000566!5.01e-09!172;CL:0000624!1.37e-08!6;CL:0000988!3.80e-08!182;CL:0002032!4.63e-08!165;CL:0000837!4.63e-08!165;CL:0000945!3.82e-07!24;CL:0000826!3.82e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.93e-37;11!CL:0000791;1.05e-32;18!CL:0000789;1.05e-32;18!CL:0002419;1.05e-32;18!CL:0000084;5.77e-32;25!CL:0002127;3.74e-18;1!CL:0000911;3.74e-18;1!CL:0000814;3.74e-18;1!CL:0000542;1.20e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.93e-37,11;CL:0000791,1.05e-32,18;CL:0000789,1.05e-32,18;CL:0002420,1.05e-32,18;CL:0002419,1.05e-32,18;CL:0000790,1.05e-32,18;CL:0000084,5.65e-32,25;CL:0000827,5.65e-32,25;CL:0000838,7.61e-20,52;CL:0000542,1.84e-19,53;CL:0000051,1.84e-19,53;CL:0002127,3.75e-18,1;CL:0000914,3.75e-18,1;CL:0000911,3.75e-18,1;CL:0000814,3.75e-18,1;CL:0002042,3.75e-18,1;CL:0002039,3.75e-18,1;CL:0002040,3.75e-18,1;CL:0002041,3.75e-18,1;CL:0000893,9.46e-10,2;CL:0002489,9.46e-10,2;CL:0000809,9.46e-10,2;CL:0000808,9.46e-10,2;CL:0000894,9.46e-10,2;CL:0000806,9.46e-10,2;CL:0000807,9.46e-10,2;CL:0000805,9.46e-10,2;CL:0002425,9.46e-10,2;CL:0002087,1.39e-08,115;CL:0002031,3.33e-08,120;CL:0000738,3.62e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.05e-32;18!CL:0000051;1.20e-12;53!CL:0002425;9.46e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;8.72e-18;1!DOID:74;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,4.44e-18,1;DOID:74,1.03e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.22e-10!7;UBERON:0002370!1.83e-07!4;UBERON:0005058!1.83e-07!4;UBERON:0009113!1.83e-07!4;UBERON:0003295!1.83e-07!4;UBERON:0005562!1.83e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SOAT2 | |||
}} | }} |
Latest revision as of 01:45, 19 September 2015
Short description: | p2@SOAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SOAT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -308bp_to_NM_003578, uc001sbv.2, uc009zms.2_5end |
EntrezGene: | SOAT2 |
HGNC: | 11178 |
UniProt: | O75908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.93e-37 | 11 |
mature alpha-beta T cell | 1.05e-32 | 18 |
alpha-beta T cell | 1.05e-32 | 18 |
immature T cell | 1.05e-32 | 18 |
mature T cell | 1.05e-32 | 18 |
immature alpha-beta T cell | 1.05e-32 | 18 |
T cell | 5.65e-32 | 25 |
pro-T cell | 5.65e-32 | 25 |
lymphoid lineage restricted progenitor cell | 7.61e-20 | 52 |
lymphocyte | 1.84e-19 | 53 |
common lymphoid progenitor | 1.84e-19 | 53 |
innate effector T cell | 3.75e-18 | 1 |
immature NK T cell | 3.75e-18 | 1 |
effector T cell | 3.75e-18 | 1 |
mature NK T cell | 3.75e-18 | 1 |
immature NK T cell stage IV | 3.75e-18 | 1 |
immature NK T cell stage I | 3.75e-18 | 1 |
immature NK T cell stage II | 3.75e-18 | 1 |
immature NK T cell stage III | 3.75e-18 | 1 |
thymocyte | 9.46e-10 | 2 |
double negative thymocyte | 9.46e-10 | 2 |
double-positive, alpha-beta thymocyte | 9.46e-10 | 2 |
DN4 thymocyte | 9.46e-10 | 2 |
DN1 thymic pro-T cell | 9.46e-10 | 2 |
DN2 thymocyte | 9.46e-10 | 2 |
DN3 thymocyte | 9.46e-10 | 2 |
immature single positive thymocyte | 9.46e-10 | 2 |
early T lineage precursor | 9.46e-10 | 2 |
nongranular leukocyte | 1.39e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.33e-08 | 120 |
leukocyte | 3.62e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
anemia | 4.44e-18 | 1 |
hematopoietic system disease | 1.03e-09 | 2 |