FFCP PHASE1:Hg19::chr12:56223309..56223362,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:56223309..56223362,-
|short_description=p1@DNAJC14
|description=CAGE_peak_1_at_DNAJC14_5end
|association_with_transcript=24bp_to_ENST00000546957_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85406 | |EntrezGene=85406 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24581 | |HGNC=24581 | ||
|TSSclassifier=strong | |||
|UniProt=F8VYY5 | |UniProt=F8VYY5 | ||
|association_with_transcript=24bp_to_ENST00000546957_5end | |||
|cluster_id=chr12:56223309..56223362,- | |||
|description=CAGE_peak_1_at_DNAJC14_5end | |||
|id=chr12:56223309..56223362,- | |||
|ontology_enrichment_celltype=CL:0000066!4.72e-14!254;CL:0000548!3.36e-10!679;CL:0000004!3.36e-10!679;CL:0000255!3.36e-10!679;CL:0000213!6.34e-10!57;CL:0000215!6.34e-10!57;CL:0000012!2.12e-09!682;CL:0002078!4.75e-09!44;CL:0000063!7.24e-08!578;CL:0000115!3.51e-07!35;CL:1000497!4.34e-07!18;CL:0002518!4.34e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.22e-07;17!CL:0002518;1.22e-07;17!CL:1000449;5.83e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.79e-14,253;CL:0000213,2.34e-10,58;CL:0000215,2.34e-10,58;CL:0002078,1.69e-09,45;CL:0000115,1.27e-07,36;CL:1000497,1.48e-07,17;CL:0002518,1.48e-07,17;CL:1000449,6.70e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.06e-16!239;DOID:162!6.63e-16!235;DOID:0050686!7.72e-10!137;DOID:0050687!2.49e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.06e-16,239;DOID:162,6.63e-16,235;DOID:0050686,7.72e-10,137;DOID:0050687,2.49e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0005177!2.14e-09!107;UBERON:0005172!6.46e-08!55;UBERON:0005173!6.46e-08!55;UBERON:0009569!1.83e-07!113;UBERON:0002417!2.61e-07!61;UBERON:0000916!2.61e-07!61;UBERON:0000466!4.01e-07!126;UBERON:0003887!5.46e-07!21;UBERON:0001851!8.50e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0001851;2.09e-07;15!UBERON:0006555;5.83e-07;15!UBERON:0004819;5.83e-07;15!UBERON:0001285;5.83e-07;15!UBERON:0007684;5.83e-07;15!UBERON:0000353;6.05e-07;15!UBERON:0002113;8.23e-07;24!UBERON:0011143;8.23e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.37e-10,101;UBERON:0005172,4.08e-08,54;UBERON:0005173,4.08e-08,54;UBERON:0009569,7.45e-08,112;UBERON:0002417,1.76e-07,60;UBERON:0000916,1.76e-07,60;UBERON:0001851,2.70e-07,15;UBERON:0000353,6.05e-07,15;UBERON:0004211,6.70e-07,15;UBERON:0009773,6.70e-07,15;UBERON:0001231,6.70e-07,15;UBERON:0001285,6.70e-07,15;UBERON:0007684,6.70e-07,15;UBERON:0004208,6.70e-07,15 | |||
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| ||
|short_description=p1@DNAJC14 | |||
}} | }} |
Latest revision as of 08:26, 19 September 2015
Short description: | p1@DNAJC14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNAJC14_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000546957_5end |
EntrezGene: | DNAJC14 |
HGNC: | 24581 |
UniProt: | F8VYY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.79e-14 | 253 |
lining cell | 2.34e-10 | 58 |
barrier cell | 2.34e-10 | 58 |
meso-epithelial cell | 1.69e-09 | 45 |
endothelial cell | 1.27e-07 | 36 |
kidney cell | 1.48e-07 | 17 |
kidney epithelial cell | 1.48e-07 | 17 |
epithelial cell of nephron | 6.70e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 3.37e-10 | 101 |
abdomen element | 4.08e-08 | 54 |
abdominal segment element | 4.08e-08 | 54 |
subdivision of trunk | 7.45e-08 | 112 |
abdominal segment of trunk | 1.76e-07 | 60 |
abdomen | 1.76e-07 | 60 |
cortex | 2.70e-07 | 15 |
parenchyma | 6.05e-07 | 15 |
nephron epithelium | 6.70e-07 | 15 |
renal tubule | 6.70e-07 | 15 |
nephron tubule | 6.70e-07 | 15 |
nephron | 6.70e-07 | 15 |
uriniferous tubule | 6.70e-07 | 15 |
nephrogenic mesenchyme | 6.70e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.06e-16 | 239 |
cancer | 6.63e-16 | 235 |
organ system cancer | 7.72e-10 | 137 |
cell type cancer | 2.49e-09 | 143 |