FFCP PHASE1:Hg19::chr1:179712410..179712437,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148753 | |EntrezGene=148753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28274 | |HGNC=28274 | ||
|TSSclassifier=strong | |||
|UniProt=Q96GL9,A8K8R7 | |UniProt=Q96GL9,A8K8R7 | ||
|association_with_transcript=112bp_to_ENST00000341785,NM_173509,uc001gnj.2,uc009wxk.2_5end | |association_with_transcript=112bp_to_ENST00000341785,NM_173509,uc001gnj.2,uc009wxk.2_5end | ||
|cluster_id=chr1:179712410..179712437,+ | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_1_at_FAM163A_5end | |description=CAGE_peak_1_at_FAM163A_5end | ||
|id=chr1:179712410..179712437,+ | |id=chr1:179712410..179712437,+ | ||
|ontology_enrichment_celltype=CL:0000359!4.59e-09!32;CL:0002595!3.29e-07!5;CL:0002592!4.14e-07!3 | |ontology_enrichment_celltype=CL:0000359!4.59e-09!32;CL:0002595!3.29e-07!5;CL:0002592!4.14e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002595;6.62e-17;5!CL:0002592;7.05e-16;3!CL:0000359;3.64e-14;32!CL:0002593;1.80e-11;2!CL:0000333;2.07e-10;5!CL:0000192;4.87e-08;43!CL:0002494;8.92e-08;16!CL:0002553;5.58e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,7.34e-17,5;CL:0002592,5.89e-16,3;CL:0000359,3.01e-14,32;CL:0002593,2.17e-11,2;CL:0000192,3.86e-10,43;CL:0000514,3.86e-10,43;CL:0000187,3.13e-09,55;CL:0000680,1.20e-08,58;CL:0000056,1.20e-08,58;CL:0000355,1.20e-08,58;CL:0000393,4.02e-08,61;CL:0000211,4.02e-08,61;CL:0002494,8.99e-08,16;CL:0002553,5.58e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;4.87e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;9.57e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.33e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.25e-20!115;UBERON:0001049!3.48e-18!57;UBERON:0005068!3.48e-18!57;UBERON:0006241!3.48e-18!57;UBERON:0007135!3.48e-18!57;UBERON:0002616!8.13e-16!59;UBERON:0000073!2.60e-15!94;UBERON:0001016!2.60e-15!94;UBERON:0000025!3.75e-15!194;UBERON:0000955!2.53e-14!69;UBERON:0006238!2.53e-14!69;UBERON:0001017!4.52e-14!82;UBERON:0005743!5.56e-14!86;UBERON:0002780!2.43e-13!41;UBERON:0001890!2.43e-13!41;UBERON:0006240!2.43e-13!41;UBERON:0003075!2.69e-13!86;UBERON:0007284!2.69e-13!86;UBERON:0003080!6.71e-13!42;UBERON:0002346!2.50e-12!90;UBERON:0004111!1.49e-10!241;UBERON:0001894!1.70e-10!7;UBERON:0006222!1.70e-10!7;UBERON:0000477!6.45e-10!286;UBERON:0000481!8.55e-10!347;UBERON:0000483!3.79e-09!309;UBERON:0003056!4.14e-09!61;UBERON:0003296!5.78e-09!4;UBERON:0010133!5.78e-09!4;UBERON:0000119!6.53e-09!312;UBERON:0004573!9.48e-09!33;UBERON:0004571!9.48e-09!33;UBERON:0000153!1.07e-08!129;UBERON:0007811!1.07e-08!129;UBERON:0002298!5.25e-08!8;UBERON:0001893!2.42e-07!34;UBERON:0000033!2.88e-07!123;UBERON:0002020!2.92e-07!34;UBERON:0003528!2.92e-07!34;UBERON:0003834!3.29e-07!5;UBERON:0001533!3.29e-07!5;UBERON:0001637!4.09e-07!42;UBERON:0003509!4.09e-07!42;UBERON:0004572!4.09e-07!42;UBERON:0001621!4.14e-07!3;UBERON:0001869!7.97e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!4.25e-20!115;UBERON:0001049!3.48e-18!57;UBERON:0005068!3.48e-18!57;UBERON:0006241!3.48e-18!57;UBERON:0007135!3.48e-18!57;UBERON:0002616!8.13e-16!59;UBERON:0000073!2.60e-15!94;UBERON:0001016!2.60e-15!94;UBERON:0000025!3.75e-15!194;UBERON:0000955!2.53e-14!69;UBERON:0006238!2.53e-14!69;UBERON:0001017!4.52e-14!82;UBERON:0005743!5.56e-14!86;UBERON:0002780!2.43e-13!41;UBERON:0001890!2.43e-13!41;UBERON:0006240!2.43e-13!41;UBERON:0003075!2.69e-13!86;UBERON:0007284!2.69e-13!86;UBERON:0003080!6.71e-13!42;UBERON:0002346!2.50e-12!90;UBERON:0004111!1.49e-10!241;UBERON:0001894!1.70e-10!7;UBERON:0006222!1.70e-10!7;UBERON:0000477!6.45e-10!286;UBERON:0000481!8.55e-10!347;UBERON:0000483!3.79e-09!309;UBERON:0003056!4.14e-09!61;UBERON:0003296!5.78e-09!4;UBERON:0010133!5.78e-09!4;UBERON:0000119!6.53e-09!312;UBERON:0004573!9.48e-09!33;UBERON:0004571!9.48e-09!33;UBERON:0000153!1.07e-08!129;UBERON:0007811!1.07e-08!129;UBERON:0002298!5.25e-08!8;UBERON:0001893!2.42e-07!34;UBERON:0000033!2.88e-07!123;UBERON:0002020!2.92e-07!34;UBERON:0003528!2.92e-07!34;UBERON:0003834!3.29e-07!5;UBERON:0001533!3.29e-07!5;UBERON:0001637!4.09e-07!42;UBERON:0003509!4.09e-07!42;UBERON:0004572!4.09e-07!42;UBERON:0001621!4.14e-07!3;UBERON:0001869!7.97e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;6.62e-17;5!UBERON:0001533;6.62e-17;5!UBERON:0003498;7.05e-16;3!UBERON:0005985;7.05e-16;3!UBERON:0001621;7.05e-16;3!UBERON:0003296;7.01e-13;4!UBERON:0010133;7.01e-13;4!UBERON:0001894;1.90e-12;7!UBERON:0003513;4.07e-12;7!UBERON:0002370;5.45e-12;2!UBERON:0005058;5.45e-12;2!UBERON:0009113;5.45e-12;2!UBERON:0000007;6.75e-12;2!UBERON:0002456;1.80e-11;2!UBERON:0004573;2.26e-11;33!UBERON:0004571;2.26e-11;33!UBERON:0000013;2.07e-10;5!UBERON:0002410;2.07e-10;5!UBERON:0001637;2.21e-08;42!UBERON:0003509;2.21e-08;42!UBERON:0004572;2.21e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,7.34e-17,5;UBERON:0001533,7.34e-17,5;UBERON:0001621,5.89e-16,3;UBERON:0004573,9.23e-14,33;UBERON:0004571,9.23e-14,33;UBERON:0003296,6.48e-13,4;UBERON:0010133,6.48e-13,4;UBERON:0001894,1.71e-12,7;UBERON:0006222,1.71e-12,7;UBERON:0003513,4.38e-12,7;UBERON:0000007,6.07e-12,2;UBERON:0002456,2.17e-11,2;UBERON:0001637,2.01e-10,42;UBERON:0003509,2.01e-10,42;UBERON:0004572,2.01e-10,42;UBERON:0000013,2.01e-10,5;UBERON:0002410,2.01e-10,5;UBERON:0007500,4.21e-10,59;UBERON:0001981,4.21e-10,59;UBERON:0004537,4.21e-10,59;UBERON:0006965,4.21e-10,59;UBERON:0003498,8.88e-10,5;UBERON:0005985,8.88e-10,5;UBERON:0001134,1.64e-09,62;UBERON:0002036,1.64e-09,62;UBERON:0003082,1.64e-09,62;UBERON:0002385,3.84e-09,64;UBERON:0001015,3.84e-09,64;UBERON:0000383,3.84e-09,64;UBERON:0004872,4.02e-09,83;UBERON:0000055,1.85e-08,68;UBERON:0000025,3.74e-08,192;UBERON:0002329,5.15e-08,71;UBERON:0003059,5.15e-08,71;UBERON:0007282,5.15e-08,71;UBERON:0004290,5.15e-08,71;UBERON:0009618,5.15e-08,71;UBERON:0003077,7.16e-08,72;UBERON:0007285,7.16e-08,72;UBERON:0007524,9.86e-08,73;UBERON:0007503,4.30e-07,78;UBERON:0002049,4.39e-07,78;UBERON:0007798,4.39e-07,78 | |||
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|short_description=p1@FAM163A | |short_description=p1@FAM163A | ||
}} | }} |
Latest revision as of 22:46, 18 September 2015
Short description: | p1@FAM163A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM163A_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 112bp_to_ENST00000341785, NM_173509, uc001gnj.2, uc009wxk.2_5end |
EntrezGene: | FAM163A |
HGNC: | 28274 |
UniProt: | Q96GL9A8K8R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 7.34e-17 | 5 |
smooth muscle cell of the coronary artery | 5.89e-16 | 3 |
vascular associated smooth muscle cell | 3.01e-14 | 32 |
smooth muscle cell of the internal thoracic artery | 2.17e-11 | 2 |
smooth muscle cell | 3.86e-10 | 43 |
smooth muscle myoblast | 3.86e-10 | 43 |
muscle cell | 3.13e-09 | 55 |
muscle precursor cell | 1.20e-08 | 58 |
myoblast | 1.20e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.20e-08 | 58 |
electrically responsive cell | 4.02e-08 | 61 |
electrically active cell | 4.02e-08 | 61 |
cardiocyte | 8.99e-08 | 16 |
lung fibroblast | 5.58e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.33e-09 | 6 |