FFCP PHASE1:Hg19::chr13:102142243..102142252,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:102142243..102142252,+
|short_description=p13@ITGBL1
|description=CAGE_peak_13_at_ITGBL1_5end
|association_with_transcript=-50bp_to_ENST00000376162_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9358 | |EntrezGene=9358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6164 | |HGNC=6164 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ02 | |UniProt=B4DQ02 | ||
|association_with_transcript=-50bp_to_ENST00000376162_5end | |||
|cluster_id=chr13:102142243..102142252,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_13_at_ITGBL1_5end | |||
|id=chr13:102142243..102142252,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.00e-27!24;CL:0000213!5.00e-22!57;CL:0000215!5.00e-22!57;CL:0000076!3.38e-19!62;CL:0002078!2.06e-18!44;CL:0000071!2.53e-17!18;CL:0002546!2.53e-17!18;CL:0000115!3.33e-17!35;CL:0005020!5.28e-12!6;CL:0002138!5.28e-12!6;CL:0005022!5.28e-12!6;CL:0002544!9.29e-12!6;CL:0000222!1.18e-11!119;CL:0000066!4.61e-10!254;CL:0002618!1.14e-09!3;CL:0002541!3.21e-09!3;CL:0002543!3.38e-08!6;CL:0002150!4.78e-08!3;CL:0000861!4.78e-08!3;CL:0000077!9.85e-08!19;CL:1000413!1.08e-07!9;CL:0002545!5.78e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.66e-19;24!CL:0002138;4.95e-13;6!CL:0000115;1.10e-10;36!CL:0002535;1.80e-10;2!CL:0002545;2.72e-10;2!CL:0000071;1.36e-09;18!CL:0002078;1.78e-07;45!CL:0002541;1.93e-07;3!CL:0002144;2.79e-07;3!CL:0002618;2.79e-07;3!CL:0000213;4.83e-07;58!CL:0000215;4.83e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.50e-19,24;CL:0005020,4.26e-13,6;CL:0002138,4.26e-13,6;CL:0005022,4.26e-13,6;CL:0000115,1.40e-12,36;CL:0000213,5.15e-11,58;CL:0000215,5.15e-11,58;CL:0002535,1.89e-10,2;CL:0002545,3.58e-10,2;CL:0002078,4.43e-10,45;CL:0000071,1.44e-09,18;CL:0002546,1.44e-09,18;CL:0002541,1.93e-07,3;CL:0002618,2.32e-07,3;CL:0002144,3.16e-07,3;CL:0000076,3.49e-07,63 | |||
|ontology_enrichment_development_v019=CL:0005022;4.95e-13;6!CL:0002546;1.36e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.53e-17!18;UBERON:0004638!2.53e-17!18;UBERON:0004852!2.53e-17!18;UBERON:0000478!2.34e-14!24;UBERON:0000487!1.09e-13!22;UBERON:0006914!9.91e-12!25;UBERON:0005631!2.07e-11!14;UBERON:0000158!2.07e-11!14;UBERON:0002066!2.40e-09!5;UBERON:0000476!3.21e-09!3;UBERON:0000920!3.21e-09!3;UBERON:0001473!6.89e-09!8;UBERON:0004536!6.89e-09!8;UBERON:0006558!6.89e-09!8;UBERON:0000055!9.90e-09!69;UBERON:0001638!8.84e-08!9;UBERON:0003920!8.84e-08!9;UBERON:0004582!8.84e-08!9;UBERON:0003915!1.08e-07!9;UBERON:0004700!1.08e-07!9;UBERON:0001917!1.08e-07!9;UBERON:0001009!2.67e-07!113;UBERON:0002049!4.41e-07!79;UBERON:0007798!4.41e-07!79;UBERON:0002465!5.12e-07!10;UBERON:0005800!5.78e-07!2;UBERON:0001515!5.78e-07!2;UBERON:0004535!8.49e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.53e-17;10!UBERON:0000478;1.87e-12;24!UBERON:0000178;1.70e-11;15!UBERON:0000179;1.70e-11;15!UBERON:0000463;1.70e-11;15!UBERON:0006955;1.80e-10;2!UBERON:0004801;1.80e-10;2!UBERON:0005800;2.72e-10;2!UBERON:0001515;2.72e-10;2!UBERON:0001473;5.18e-10;8!UBERON:0004536;5.18e-10;8!UBERON:0006558;5.18e-10;8!UBERON:0004638;1.36e-09;18!UBERON:0001986;1.36e-09;18!UBERON:0004852;1.36e-09;18!UBERON:0002465;3.43e-08;10!UBERON:0000487;5.93e-08;22!UBERON:0002193;1.56e-07;42!UBERON:0003124;1.93e-07;3!UBERON:0000920;1.93e-07;3!UBERON:0010523;2.79e-07;3!UBERON:0001915;2.79e-07;3!UBERON:0001982;2.79e-07;3!UBERON:0000055;2.98e-07;65!UBERON:0006914;4.60e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.19e-17,10;UBERON:0000358,6.19e-17,10;UBERON:0000307,6.19e-17,10;UBERON:0000091,6.19e-17,10;UBERON:0000087,6.19e-17,10;UBERON:0007010,6.19e-17,10;UBERON:0007806,6.19e-17,10;UBERON:0008780,6.19e-17,10;UBERON:0005728,6.19e-17,10;UBERON:0000478,1.81e-12,24;UBERON:0000178,1.64e-11,15;UBERON:0000179,1.64e-11,15;UBERON:0000463,1.64e-11,15;UBERON:0006955,1.89e-10,2;UBERON:0004801,1.89e-10,2;UBERON:0005800,3.58e-10,2;UBERON:0001515,3.58e-10,2;UBERON:0004535,4.08e-10,109;UBERON:0001473,4.62e-10,8;UBERON:0004536,4.62e-10,8;UBERON:0006558,4.62e-10,8;UBERON:0001009,7.87e-10,112;UBERON:0004638,1.44e-09,18;UBERON:0001986,1.44e-09,18;UBERON:0004852,1.44e-09,18;UBERON:0002465,3.14e-08,10;UBERON:0000487,6.23e-08,22;UBERON:0000920,1.93e-07,3;UBERON:0010523,3.16e-07,3;UBERON:0001915,3.16e-07,3;UBERON:0001982,3.16e-07,3;UBERON:0006914,4.79e-07,25 | |||
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| ||
|short_description=p13@ITGBL1 | |||
}} | }} |
Latest revision as of 08:45, 16 September 2015
Short description: | p13@ITGBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ITGBL1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -50bp_to_ENST00000376162_5end |
EntrezGene: | ITGBL1 |
HGNC: | 6164 |
UniProt: | B4DQ02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.50e-19 | 24 |
lymphangioblast | 4.26e-13 | 6 |
endothelial cell of lymphatic vessel | 4.26e-13 | 6 |
vascular lymphangioblast | 4.26e-13 | 6 |
endothelial cell | 1.40e-12 | 36 |
lining cell | 5.15e-11 | 58 |
barrier cell | 5.15e-11 | 58 |
epithelial cell of cervix | 1.89e-10 | 2 |
thoracic aorta endothelial cell | 3.58e-10 | 2 |
meso-epithelial cell | 4.43e-10 | 45 |
blood vessel endothelial cell | 1.44e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.44e-09 | 18 |
chorionic membrane mesenchymal stem cell | 1.93e-07 | 3 |
endothelial cell of umbilical vein | 2.32e-07 | 3 |
capillary endothelial cell | 3.16e-07 | 3 |
squamous epithelial cell | 3.49e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 6.19e-17 | 10 |
blastocyst | 6.19e-17 | 10 |
blastula | 6.19e-17 | 10 |
bilaminar disc | 6.19e-17 | 10 |
inner cell mass | 6.19e-17 | 10 |
cleaving embryo | 6.19e-17 | 10 |
connecting stalk | 6.19e-17 | 10 |
inner cell mass derived epiblast | 6.19e-17 | 10 |
extraembryonic mesoderm | 6.19e-17 | 10 |
extraembryonic structure | 1.81e-12 | 24 |
blood | 1.64e-11 | 15 |
haemolymphatic fluid | 1.64e-11 | 15 |
organism substance | 1.64e-11 | 15 |
uterine epithelium | 1.89e-10 | 2 |
cervix epithelium | 1.89e-10 | 2 |
segment of aorta | 3.58e-10 | 2 |
thoracic aorta | 3.58e-10 | 2 |
cardiovascular system | 4.08e-10 | 109 |
lymphatic vessel | 4.62e-10 | 8 |
lymph vasculature | 4.62e-10 | 8 |
lymphatic part of lymphoid system | 4.62e-10 | 8 |
circulatory system | 7.87e-10 | 112 |
blood vessel endothelium | 1.44e-09 | 18 |
endothelium | 1.44e-09 | 18 |
cardiovascular system endothelium | 1.44e-09 | 18 |
lymphoid system | 3.14e-08 | 10 |
simple squamous epithelium | 6.23e-08 | 22 |
egg chorion | 1.93e-07 | 3 |
microcirculatory vessel | 3.16e-07 | 3 |
endothelium of capillary | 3.16e-07 | 3 |
capillary | 3.16e-07 | 3 |
squamous epithelium | 4.79e-07 | 25 |