FFCP PHASE1:Hg19::chr20:4450974..4451005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:4450974..4451005,- | |||
|description=CAGE_peak_at_chr20:4450974..4451005,- | |description=CAGE_peak_at_chr20:4450974..4451005,- | ||
|id=chr20:4450974..4451005,- | |id=chr20:4450974..4451005,- | ||
|ontology_enrichment_celltype=CL:0002620!1.51e-38!23;CL:0000057!2.89e-25!75;CL:0000055!5.74e-15!180;CL:0002551!5.66e-09!6 | |ontology_enrichment_celltype=CL:0002620!1.51e-38!23;CL:0000057!2.89e-25!75;CL:0000055!5.74e-15!180;CL:0002551!5.66e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0002574;3.45e-11;1!CL:0002601;3.45e-11;1!CL:0002620;4.66e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002601,3.28e-11,1;CL:0002574,3.63e-11,1;CL:0002620,4.66e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.45e-11;1!UBERON:0006238;6.35e-09;10 | |||
|ontology_enrichment_disease=DOID:17!1.75e-11!5;DOID:450!1.75e-11!5;DOID:66!1.75e-11!5;DOID:423!1.75e-11!5;DOID:0080000!1.75e-11!5;DOID:11722!1.75e-11!5;DOID:171!7.53e-09!10 | |ontology_enrichment_disease=DOID:17!1.75e-11!5;DOID:450!1.75e-11!5;DOID:66!1.75e-11!5;DOID:423!1.75e-11!5;DOID:0080000!1.75e-11!5;DOID:11722!1.75e-11!5;DOID:171!7.53e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:171;2.53e-16;10!DOID:3095;2.79e-11;22!DOID:2994;2.79e-11;22!DOID:3093;3.21e-08;11 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.59e-16,10;DOID:3095,2.50e-11,22;DOID:2994,2.50e-11,22;DOID:3093,3.17e-08,11 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.58e-26!40;UBERON:0002199!5.36e-25!45;UBERON:0002416!5.36e-25!45;UBERON:0003102!7.45e-19!95;UBERON:0002067!6.47e-13!9;UBERON:0004016!6.47e-13!9;UBERON:0010083!6.47e-13!9;UBERON:0003714!5.22e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.75e-40;4!UBERON:0000923;2.75e-40;4!UBERON:0010316;2.75e-40;4!UBERON:0005291;2.75e-40;4!UBERON:0002050;2.58e-32;5!UBERON:0005423;2.58e-32;5!UBERON:0000941;3.45e-11;1!UBERON:0001785;3.45e-11;1!UBERON:0002464;3.45e-11;1!UBERON:0004904;3.45e-11;1!UBERON:0001021;3.45e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.96e-11,1;UBERON:0001785,2.96e-11,1;UBERON:0002464,2.96e-11,1;UBERON:0004904,2.96e-11,1;UBERON:0001021,2.96e-11,1;UBERON:0003902,2.96e-11,1;UBERON:0005425,2.96e-11,1 | |||
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| ||
|short_description=p@chr20:4450974..4451005,- | |short_description=p@chr20:4450974..4451005,- | ||
}} | }} |
Latest revision as of 14:32, 28 July 2015
Short description: | p@chr20:4450974..4451005, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4450974..4451005, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 3.28e-11 | 1 |
stromal cell of pancreas | 3.63e-11 | 1 |
skin fibroblast | 4.66e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.96e-11 | 1 |
cranial nerve | 2.96e-11 | 1 |
nerve trunk | 2.96e-11 | 1 |
nerve connecting eye with brain | 2.96e-11 | 1 |
nerve | 2.96e-11 | 1 |
retinal neural layer | 2.96e-11 | 1 |
presumptive neural retina | 2.96e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.59e-16 | 10 |
germ cell and embryonal cancer | 2.50e-11 | 22 |
germ cell cancer | 2.50e-11 | 22 |
nervous system cancer | 3.17e-08 | 11 |