FFCP PHASE1:Hg19::chr6:6007064..6007075,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51299 | |EntrezGene=51299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17972 | |HGNC=17972 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPD7 | |UniProt=Q9NPD7 | ||
|association_with_transcript=124bp_to_ENST00000244766_5end | |association_with_transcript=124bp_to_ENST00000244766_5end | ||
|cluster_id=chr6:6007064..6007075,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_5_at_NRN1_5end | |description=CAGE_peak_5_at_NRN1_5end | ||
|id=chr6:6007064..6007075,- | |id=chr6:6007064..6007075,- | ||
|ontology_enrichment_celltype=CL:0002620!5.14e-12!23;CL:0000136!8.34e-07!15 | |ontology_enrichment_celltype=CL:0002620!5.14e-12!23;CL:0000136!8.34e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.76e-23;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.16e-23,23;CL:0000057,1.43e-08,76;CL:0000136,3.49e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.88e-14;5!DOID:450;1.88e-14;5!DOID:66;1.88e-14;5!DOID:423;1.88e-14;5!DOID:0080000;1.88e-14;5!DOID:11722;1.88e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.14e-14,5;DOID:450,2.14e-14,5;DOID:66,2.14e-14,5;DOID:423,2.14e-14,5;DOID:0080000,2.14e-14,5;DOID:11722,2.14e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-24!115;UBERON:0002780!3.21e-16!41;UBERON:0001890!3.21e-16!41;UBERON:0006240!3.21e-16!41;UBERON:0001049!4.50e-16!57;UBERON:0005068!4.50e-16!57;UBERON:0006241!4.50e-16!57;UBERON:0007135!4.50e-16!57;UBERON:0003080!1.46e-15!42;UBERON:0001017!4.86e-15!82;UBERON:0000955!4.95e-15!69;UBERON:0006238!4.95e-15!69;UBERON:0005743!2.51e-14!86;UBERON:0002619!3.88e-14!22;UBERON:0002616!4.53e-14!59;UBERON:0000073!6.16e-14!94;UBERON:0001016!6.16e-14!94;UBERON:0001950!1.59e-12!20;UBERON:0002020!1.72e-12!34;UBERON:0003528!1.72e-12!34;UBERON:0001893!2.00e-12!34;UBERON:0002346!6.42e-12!90;UBERON:0001869!1.11e-11!32;UBERON:0002791!1.21e-11!33;UBERON:0000956!1.26e-11!25;UBERON:0000203!1.26e-11!25;UBERON:0002199!6.32e-11!45;UBERON:0002416!6.32e-11!45;UBERON:0003075!7.01e-10!86;UBERON:0007284!7.01e-10!86;UBERON:0002097!5.10e-09!40;UBERON:0000924!9.97e-09!173;UBERON:0006601!9.97e-09!173;UBERON:0003056!1.23e-08!61;UBERON:0001871!2.34e-07!7;UBERON:0004121!2.57e-07!169;UBERON:0000153!3.32e-07!129;UBERON:0007811!3.32e-07!129;UBERON:0000200!5.32e-07!6;UBERON:0000033!8.69e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.06e-22;22!UBERON:0001950;3.05e-21;20!UBERON:0000956;3.29e-19;25!UBERON:0000203;3.29e-19;25!UBERON:0001869;1.57e-17;32!UBERON:0001893;3.84e-16;34!UBERON:0002791;3.19e-15;32!UBERON:0003528;3.58e-15;34!UBERON:0002020;3.58e-15;34!UBERON:0002097;4.53e-12;41!UBERON:0002780;7.33e-12;41!UBERON:0001890;7.33e-12;41!UBERON:0002199;1.49e-11;46!UBERON:0002416;1.49e-11;46!UBERON:0000200;4.68e-11;6!UBERON:0003102;5.69e-09;50!UBERON:0000955;1.41e-08;68!UBERON:0000073;1.44e-08;53!UBERON:0002616;1.44e-08;53!UBERON:0001870;1.99e-08;3!UBERON:0001017;4.45e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.14e-22,22;UBERON:0001950,2.13e-21,20;UBERON:0000956,2.40e-19,25;UBERON:0000203,2.40e-19,25;UBERON:0001869,6.50e-19,32;UBERON:0002780,1.08e-17,41;UBERON:0001890,1.08e-17,41;UBERON:0003080,1.08e-17,41;UBERON:0006240,1.08e-17,41;UBERON:0002199,1.09e-17,46;UBERON:0002416,1.09e-17,46;UBERON:0001893,1.44e-17,34;UBERON:0003528,2.25e-17,34;UBERON:0002020,2.25e-17,34;UBERON:0000073,2.49e-17,53;UBERON:0002616,2.49e-17,53;UBERON:0002791,1.51e-16,32;UBERON:0000955,2.09e-16,68;UBERON:0006238,2.09e-16,68;UBERON:0001049,4.19e-16,56;UBERON:0005068,4.19e-16,56;UBERON:0006241,4.19e-16,56;UBERON:0007135,4.19e-16,56;UBERON:0001017,2.34e-15,81;UBERON:0002097,1.14e-14,41;UBERON:0001016,3.72e-13,89;UBERON:0002346,7.93e-12,86;UBERON:0000200,3.85e-11,6;UBERON:0003056,2.25e-10,61;UBERON:0003075,2.78e-09,82;UBERON:0007284,2.78e-09,82;UBERON:0001870,1.78e-08,3;UBERON:0007023,1.81e-08,114;UBERON:0010371,7.63e-08,104;UBERON:0004121,1.97e-07,171;UBERON:0000924,1.97e-07,171;UBERON:0006601,1.97e-07,171;UBERON:0010314,6.77e-07,132 | |||
|phase1_expression=0.54503513781167,5.35251309727458,0.140954404095971,3.00219895059391,0.446961094427288,0,0,1.26343974685366,2.08948502559871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.492603536699674,0.0787107813136792,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.73815822752988,4.7717156823066,4.86634870302636,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.825354125820202,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0.732186172644509,0,0,0.17859945656816,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,1.49091585508596,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.597794722207204,0.939475989150119,1.13311061057692,1.68540968042698,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,3.04962380671065,15.5896893837554,7.84148034290379,6.30191301777245,9.78999027765169,1.28820270022815,8.56137539125313,2.02531598689519,2.53336213419116,4.54380793639406,24.6693728361362,0,13.1353549231147,17.0271046004712,0.339121184620975,0,0,0,0,0,0,0,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0.115930404975077,0,1.29929802984966,1.38895653772983,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,1.4377491329495,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,2.0694614258501,0,0.737476674166813,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,1.96462066103151,0,0.511707249066704,0,0,0.771048469013278,1.06537035187876,1.39616165223476,0,1.16210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.457847324091717,0.495056999523528,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.721346064882224,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,2.62618933211459,0.593929361665277,0,4.97073823883149,0.281338832821026,0,0,0,0.796991953004279,0.276283915531148,0.755798243562828,0.306806047506464,0.369254416383208,0,0,0,0,0.690503839458535,0,0,3.87733098438087,3.4324196319885,3.99227596002388,0,0,0,0,0,0,0,2.62444152044929,0.520874984799877,0,0.120596438625408,0,0.663475559587348,0,4.38770794307945,0,0,0.692552326534174,0,0,0.269272933229316,0.54323685961004,7.33702667383415,0.0915975934018623,6.39641731222362,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0.296521128680622,0,0.417687798021821,0.337005664903385,0,0.468528891450678,0,0,0,0,1.20990716048664,0.30607276163049,0.568679216656392,0,0.414752765588989,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0,0,0.775912131907355,0,0.677942222341597,0,0.397429223405979,3.48209377757333,0,0,0.640358984218058,0,0,0,0.343189995723929,0,0,0,0,0,0.611989305817931,0,0,0.136905378891993,0,0,0,0,0.916641696046735,0,0,0.429226048136571,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,5.56660782866512,0.817220436669454,0,0,0,0.2249738915515,0,4.85996453264197,0,0,0.0524545881349981,0,0.896436696664224,0,0,0.662091970365432,0,0,0,0,0,0,4.25970054463554,0.113312091520126,0,0,1.29282956361551,0.66116300871345,0,0,0.533937062838473,0,0.414239055347196,0.992332043623902,0,0,0,0.544017803369474,0,0.306345576763462,1.31149052283922,0,4.43034089983493,4.51497180137264,1.502291168478,0,0.443716206147409,1.05563885000352,0.138348634936231,0,0.454947352624943,0,0,0,0,1.04478362020812,0,0,0.947015026375446,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.800055529326307,1.37358282073117,1.6837474438296,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0.107824811396682,0.314531883711793,0,1.01839517972415,66.3233750717251,2.47871528518004,0.558644917973244,0,0.0788617450012534,1.60114149657094,0,0,2.95454435443714,1.41696576325585,0.159633859057151,3.89721092057435,0,3.94196339046042,2.42213468447777,0,0,0,0.366857197043358,0,0.381382095467167,0,0.795664888465099,0.225630985047772,0.40341013740704,0,0,0,0,3.98471749248528,1.56215619722769,0,4.50252252376738,0,0,0.496211178389294,0.703484977438482,0,1.60710550763486,0.336283722218824,0.606965604236632,0.455324382702595,2.30626162422861,0,0,1.90315252335129,4.47254860227374,0,0,0.156986185701028,0,0,0,0,0.9555033757741,0.428859265059938,0,0,0,0,0,0,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| ||
|short_description=p5@NRN1 | |short_description=p5@NRN1 | ||
}} | }} |
Latest revision as of 11:27, 19 September 2015
Short description: | p5@NRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NRN1_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 124bp_to_ENST00000244766_5end |
EntrezGene: | NRN1 |
HGNC: | 17972 |
UniProt: | Q9NPD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.16e-23 | 23 |
fibroblast | 1.43e-08 | 76 |
fat cell | 3.49e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.14e-14 | 5 |
myotonic disease | 2.14e-14 | 5 |
muscle tissue disease | 2.14e-14 | 5 |
myopathy | 2.14e-14 | 5 |
muscular disease | 2.14e-14 | 5 |
myotonic dystrophy | 2.14e-14 | 5 |