FFCP PHASE1:Hg19::chr13:38156622..38156656,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:38156622..38156656,-
|short_description=p2@AK297914
|description=CAGE_peak_2_at_AK297914_5end
|association_with_transcript=-13bp_to_AK297914_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B7Z4V4 | |UniProt=B7Z4V4 | ||
|association_with_transcript=-13bp_to_AK297914_5end | |||
|cluster_id=chr13:38156622..38156656,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_2_at_AK297914_5end | |||
|id=chr13:38156622..38156656,- | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-19!180;CL:0000057!5.28e-15!75;CL:0002334!1.15e-11!12;CL:0000680!1.20e-10!57;CL:0000056!1.20e-10!57;CL:0000355!1.20e-10!57;CL:0002494!4.23e-10!16;CL:0000187!1.01e-09!54;CL:0000393!1.30e-08!60;CL:0000211!1.30e-08!60;CL:0000183!3.21e-08!59;CL:0002548!1.54e-07!6;CL:0000188!7.17e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.61e-14;12!CL:0002548;2.86e-11;6!CL:0002580;1.33e-09;3!CL:0002494;1.35e-09;16!CL:0000135;1.65e-09;3!CL:0000388;1.65e-09;3!CL:0002579;4.51e-09;3!CL:0000746;9.97e-09;3!CL:1000306;5.71e-07;4!CL:0002547;5.71e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.39e-16,76;CL:0002334,9.83e-14,12;CL:0002548,5.46e-11,6;CL:0002580,1.26e-09,3;CL:0000135,1.68e-09,3;CL:0000388,1.68e-09,3;CL:0002494,1.82e-09,16;CL:0002579,6.22e-09,3;CL:0000746,8.63e-09,3;CL:0000513,8.63e-09,3;CL:1000306,5.67e-07,4;CL:0002547,5.67e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;9.97e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.84e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.77e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.09e-11!61;UBERON:0002036!2.09e-11!61;UBERON:0003082!2.09e-11!61;UBERON:0002385!9.73e-11!63;UBERON:0001015!9.73e-11!63;UBERON:0000383!9.73e-11!63;UBERON:0000948!3.83e-10!24;UBERON:0005498!3.83e-10!24;UBERON:0004140!3.83e-10!24;UBERON:0009881!3.83e-10!24;UBERON:0004141!3.83e-10!24;UBERON:0003084!3.83e-10!24;UBERON:0007005!3.83e-10!24;UBERON:0004139!3.83e-10!24;UBERON:0004291!3.83e-10!24;UBERON:0007100!1.62e-09!27;UBERON:0004290!9.76e-09!70;UBERON:0000914!1.99e-08!83;UBERON:0002329!1.99e-08!83;UBERON:0003077!1.99e-08!83;UBERON:0003059!1.99e-08!83;UBERON:0007282!1.99e-08!83;UBERON:0009618!1.99e-08!83;UBERON:0007285!1.99e-08!83;UBERON:0004872!7.54e-08!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.65e-09;3!UBERON:0000043;1.65e-09;3!UBERON:0007845;1.65e-09;3!UBERON:0004797;5.71e-07;4!UBERON:0000415;5.71e-07;4!UBERON:0007240;5.71e-07;4!UBERON:0005742;5.71e-07;4!UBERON:0005734;5.71e-07;4!UBERON:0004664;5.71e-07;4!UBERON:0004663;5.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.68e-09,3;UBERON:0000043,1.68e-09,3;UBERON:0007845,1.68e-09,3;UBERON:0000948,1.69e-07,24;UBERON:0005498,1.69e-07,24;UBERON:0004140,1.69e-07,24;UBERON:0009881,1.69e-07,24;UBERON:0004141,1.69e-07,24;UBERON:0003084,1.69e-07,24;UBERON:0007005,1.69e-07,24;UBERON:0004139,1.69e-07,24;UBERON:0004291,1.69e-07,24;UBERON:0000415,5.67e-07,4;UBERON:0007240,5.67e-07,4;UBERON:0005742,5.67e-07,4;UBERON:0005734,5.67e-07,4;UBERON:0004664,5.67e-07,4;UBERON:0004663,5.67e-07,4 | |||
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| ||
|short_description=p2@AK297914 | |||
}} | }} |
Latest revision as of 06:59, 17 September 2015
Short description: | p2@AK297914 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK297914_5end |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | -13bp_to_AK297914_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.39e-16 | 76 |
preadipocyte | 9.83e-14 | 12 |
cardiac fibroblast | 5.46e-11 | 6 |
preadipocyte of the breast | 1.26e-09 | 3 |
fibrocyte | 1.68e-09 | 3 |
tendon cell | 1.68e-09 | 3 |
cardiocyte | 1.82e-09 | 16 |
omentum preadipocyte | 6.22e-09 | 3 |
cardiac muscle cell | 8.63e-09 | 3 |
cardiac muscle myoblast | 8.63e-09 | 3 |
fibroblast of tunica adventitia of artery | 5.67e-07 | 4 |
fibroblast of the aortic adventitia | 5.67e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.68e-09 | 3 |
tendon | 1.68e-09 | 3 |
regular connective tissue | 1.68e-09 | 3 |
heart | 1.69e-07 | 24 |
primitive heart tube | 1.69e-07 | 24 |
primary heart field | 1.69e-07 | 24 |
anterior lateral plate mesoderm | 1.69e-07 | 24 |
heart tube | 1.69e-07 | 24 |
heart primordium | 1.69e-07 | 24 |
cardiac mesoderm | 1.69e-07 | 24 |
cardiogenic plate | 1.69e-07 | 24 |
heart rudiment | 1.69e-07 | 24 |
artery wall | 5.67e-07 | 4 |
tunica adventitia of artery | 5.67e-07 | 4 |
adventitia | 5.67e-07 | 4 |
tunica adventitia of blood vessel | 5.67e-07 | 4 |
aorta tunica adventitia | 5.67e-07 | 4 |
aorta wall | 5.67e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.77e-11 | 14 |