FFCP PHASE1:Hg19::chr6:86176947..86176961,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:86176947..86176961,+ | |||
|coexpression_cluster_id=C1981 | |||
|description=CAGE_peak_at_chr6:86176947..86176961,+ | |description=CAGE_peak_at_chr6:86176947..86176961,+ | ||
|id=chr6:86176947..86176961,+ | |id=chr6:86176947..86176961,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.15e-13!180;CL:0000680!2.47e-11!57;CL:0000056!2.47e-11!57;CL:0000355!2.47e-11!57;CL:0000359!5.92e-11!32;CL:0000183!5.32e-10!59;CL:0002371!1.56e-09!591;CL:0000187!2.05e-09!54;CL:0000192!2.18e-09!42;CL:0000514!2.18e-09!42;CL:0000499!1.22e-08!27;CL:0000144!2.66e-08!625;CL:0000057!4.52e-08!75;CL:0000393!1.28e-07!60;CL:0000211!1.28e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.15e-13!180;CL:0000680!2.47e-11!57;CL:0000056!2.47e-11!57;CL:0000355!2.47e-11!57;CL:0000359!5.92e-11!32;CL:0000183!5.32e-10!59;CL:0002371!1.56e-09!591;CL:0000187!2.05e-09!54;CL:0000192!2.18e-09!42;CL:0000514!2.18e-09!42;CL:0000499!1.22e-08!27;CL:0000144!2.66e-08!625;CL:0000057!4.52e-08!75;CL:0000393!1.28e-07!60;CL:0000211!1.28e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.41e-11;5!CL:0000359;6.41e-11;32!CL:0000135;5.84e-09;3!CL:0000515;5.84e-09;3!CL:0000388;5.84e-09;3!CL:0000192;2.16e-07;43!CL:0002591;3.84e-07;1!CL:0002379;3.84e-07;1!CL:0000056;6.39e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.21e-11,5;CL:0000359,6.25e-11,32;CL:0000135,3.62e-09,3;CL:0000388,3.62e-09,3;CL:0000680,1.40e-08,58;CL:0000056,1.40e-08,58;CL:0000355,1.40e-08,58;CL:0000192,7.90e-08,43;CL:0000514,7.90e-08,43;CL:0002379,3.02e-07,1;CL:0002591,4.89e-07,1;CL:0000515,8.85e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;2.16e-07;43!UBERON:0003099;3.84e-07;1!UBERON:0003852;3.84e-07;1!CL:0000515;6.39e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.46e-19;3!DOID:127;1.46e-19;3!DOID:0060072;8.31e-15;4!DOID:3620;3.84e-07;1!DOID:3565;3.84e-07;1!DOID:3112;3.84e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.22e-19,3;DOID:127,1.22e-19,3;DOID:0060072,7.27e-15,4;DOID:3620,3.02e-07,1;DOID:3565,3.02e-07,1;DOID:3112,3.41e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.70e-14!83;UBERON:0002329!1.70e-14!83;UBERON:0003077!1.70e-14!83;UBERON:0003059!1.70e-14!83;UBERON:0007282!1.70e-14!83;UBERON:0009618!1.70e-14!83;UBERON:0007285!1.70e-14!83;UBERON:0000486!4.72e-12!82;UBERON:0004290!1.95e-11!70;UBERON:0001637!4.66e-11!42;UBERON:0003509!4.66e-11!42;UBERON:0004572!4.66e-11!42;UBERON:0001134!6.23e-10!61;UBERON:0002036!6.23e-10!61;UBERON:0003082!6.23e-10!61;UBERON:0002385!2.63e-09!63;UBERON:0001015!2.63e-09!63;UBERON:0000383!2.63e-09!63;UBERON:0005256!4.27e-09!143;UBERON:0002049!7.11e-09!79;UBERON:0007798!7.11e-09!79;UBERON:0001981!3.88e-08!60;UBERON:0007500!3.88e-08!60;UBERON:0004537!3.88e-08!60;UBERON:0006965!3.88e-08!60;UBERON:0000055!5.50e-08!69;UBERON:0004573!8.14e-08!33;UBERON:0004571!8.14e-08!33;UBERON:0004872!7.38e-07!84;UBERON:0002100!7.71e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.41e-11;5!UBERON:0001533;1.41e-11;5!UBERON:0007846;5.84e-09;3!UBERON:0000043;5.84e-09;3!UBERON:0007845;5.84e-09;3!UBERON:0003513;2.13e-08;7!UBERON:0004573;1.00e-07;33!UBERON:0004571;1.00e-07;33!UBERON:0005705;3.84e-07;1!UBERON:0008193;3.84e-07;1!UBERON:0010912;3.84e-07;1!UBERON:0002514;3.84e-07;1!UBERON:0003457;3.84e-07;1!UBERON:0008907;3.84e-07;1!UBERON:0008001;3.84e-07;1!UBERON:0007213;3.84e-07;1!UBERON:0009891;3.84e-07;1!UBERON:0007914;3.84e-07;1!UBERON:0007375;3.84e-07;1!UBERON:0003323;3.84e-07;1!UBERON:0010258;3.84e-07;1!UBERON:0005253;3.84e-07;1!UBERON:0007842;3.84e-07;1!UBERON:0002397;3.84e-07;1!UBERON:0003113;3.84e-07;1!UBERON:0003277;3.84e-07;1!UBERON:0001709;3.84e-07;1!UBERON:0002244;3.84e-07;1!UBERON:0005620;3.84e-07;1!UBERON:0010364;3.84e-07;1!UBERON:0004288;3.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.21e-11,5;UBERON:0001533,1.21e-11,5;UBERON:0007524,2.11e-09,73;UBERON:0007846,3.62e-09,3;UBERON:0000043,3.62e-09,3;UBERON:0007845,3.62e-09,3;UBERON:0003513,1.91e-08,7;UBERON:0004573,3.35e-08,33;UBERON:0004571,3.35e-08,33;UBERON:0002329,3.83e-08,71;UBERON:0003059,3.83e-08,71;UBERON:0007282,3.83e-08,71;UBERON:0004290,3.83e-08,71;UBERON:0009618,3.83e-08,71;UBERON:0000486,4.34e-08,83;UBERON:0001637,4.82e-08,42;UBERON:0003509,4.82e-08,42;UBERON:0004572,4.82e-08,42;UBERON:0003077,5.30e-08,72;UBERON:0007285,5.30e-08,72;UBERON:0001134,6.50e-08,62;UBERON:0002036,6.50e-08,62;UBERON:0003082,6.50e-08,62;UBERON:0002385,1.30e-07,64;UBERON:0001015,1.30e-07,64;UBERON:0000383,1.30e-07,64;UBERON:0007503,3.10e-07,78;UBERON:0005705,6.20e-07,1;UBERON:0008193,6.20e-07,1;UBERON:0010912,6.20e-07,1;UBERON:0002514,6.20e-07,1;UBERON:0003457,6.20e-07,1;UBERON:0008907,6.20e-07,1;UBERON:0008001,6.20e-07,1;UBERON:0007213,6.20e-07,1;UBERON:0009891,6.20e-07,1;UBERON:0007914,6.20e-07,1;UBERON:0009292,6.20e-07,1;UBERON:0003099,6.20e-07,1;UBERON:0007375,6.20e-07,1;UBERON:0003323,6.20e-07,1;UBERON:0010258,6.20e-07,1;UBERON:0007842,6.20e-07,1;UBERON:0009494,6.20e-07,1;UBERON:0010042,6.20e-07,1;UBERON:0010045,6.20e-07,1;UBERON:0010259,6.20e-07,1;UBERON:0010359,6.20e-07,1;UBERON:0009526,6.20e-07,1;UBERON:0002397,6.20e-07,1;UBERON:0003113,6.20e-07,1;UBERON:0003277,6.20e-07,1;UBERON:0001709,6.20e-07,1;UBERON:0004066,6.20e-07,1;UBERON:0002244,6.20e-07,1;UBERON:0005620,6.20e-07,1;UBERON:0004362,6.20e-07,1;UBERON:0010364,6.20e-07,1;UBERON:0010046,6.20e-07,1;UBERON:0005868,6.20e-07,1;UBERON:0007238,6.20e-07,1;UBERON:0004288,6.20e-07,1;UBERON:0004068,6.20e-07,1;UBERON:0010334,6.20e-07,1;UBERON:0003852,6.20e-07,1;UBERON:0010253,6.20e-07,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0.791300934685361,0.618831764800233,0.994192127183747,2.01697543935533,0,2.19093027116212,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.724232594804119,0,1.45990461090791,0.378139268656271,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,1.06729878806013,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.860509862246441,0.354668382198357,0,0,0,0,0.269421344139376,0,0,0,0,0.624320153660641,0,0.298897361103602,0.939475989150119,0.323745888736263,0,0.408308342509787,1.22834317311768,0.309977343527296,0,1.23633464639278,0,0,0,0.625592599359821,0,0.438977620880838,0.30648779579902,0.751190294532984,0.226864366320042,0,0,0.423863802319124,0.300091096084402,0.206105058476878,0,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0.484938170456436,0,0.201504196455281,0,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,1.44375896333917,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0.425325291727159,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.2933531432838,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,2.26023954805422,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,1.60586089917446,0,0.234282829985426,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.260650843404249,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0.561320188866147,0.128139149255701,0.511707249066704,0.321707842287215,0,0.308419387605311,0.355123450626254,0,0,0.581051892299796,0,0.40101294060657,0.184161977871793,0.114814448164607,0.546273504020151,0.524497659837696,0,0.462092022626489,0,0,0.527758144464379,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0,0.170453254832202,0.0890320356467374,0.330569830721956,0.192190067365106,0,0,0,2.20368642781448,0.6970372701606,0.308033580176089,0,0,0.74129687641568,0,0.372158369359667,0,0.571890581771475,0,0,0.318203247925937,1.56989728039846,0,0,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.974853958525138,3.16950440270266,0.545999645631943,0,1.13008116620243,0,1.32687795048244,2.63070531152258,0,0,0.405820753925408,0.92947049429925,0,0.143411352204052,0,0.7133421029625,0.709522128141196,3.58882980006029,0.658589785919804,0,0,0.288666338176536,0.670302275535787,0,0,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0.277349346026277,0.694238953340524,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0.451961481561065,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,1.29649318189335,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,2.71499800876856,4.32110745600634,9.47103344317287,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,1.41159491818903,0,0,0.447764408660622,0,1.10961172300523,0.568209015825267,0.251567901752575,0,0.228840068396924,0,0.466311601748341,0.73927574994817,0.318593534327405,0,0.310525913752519,0,0.797525143673985,1.04349012362347,0.300515217994437,0.380805212168795,0,0.363697318405119,0.107410557042488,0.464033759878494,1.19428766609585,1.60011105865261,0,0.673498977531838,0,0,0,0,0,0,1.71315693154527,0,0,0,0,0,0.506827321959218,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,1.05802783107205,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0.473328002922261,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,2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| ||
|short_description=p@chr6:86176947..86176961,+ | |short_description=p@chr6:86176947..86176961,+ | ||
}} | }} |
Latest revision as of 03:36, 31 July 2015
Short description: | p@chr6:86176947..86176961, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:86176947..86176961, + |
Coexpression cluster: | C1981_leiomyoma_Synoviocyte_Smooth_tenocyte_mesenchymal_Myoblast_meningioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.21e-11 | 5 |
vascular associated smooth muscle cell | 6.25e-11 | 32 |
fibrocyte | 3.62e-09 | 3 |
tendon cell | 3.62e-09 | 3 |
muscle precursor cell | 1.40e-08 | 58 |
myoblast | 1.40e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.40e-08 | 58 |
smooth muscle cell | 7.90e-08 | 43 |
smooth muscle myoblast | 7.90e-08 | 43 |
meningothelial cell | 3.02e-07 | 1 |
smooth muscle cell of the pulmonary artery | 4.89e-07 | 1 |
skeletal muscle myoblast | 8.85e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.22e-19 | 3 |
leiomyoma | 1.22e-19 | 3 |
benign neoplasm | 7.27e-15 | 4 |
central nervous system cancer | 3.02e-07 | 1 |
meningioma | 3.02e-07 | 1 |
papillary adenocarcinoma | 3.41e-07 | 1 |