FFCP PHASE1:Hg19::chr7:134212226..134212234,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57016 | |EntrezGene=57016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=382 | |HGNC=382 | ||
|TSSclassifier=strong | |||
|UniProt=O60218 | |UniProt=O60218 | ||
|association_with_transcript=-109bp_to_ENST00000359579,NM_020299,uc003vrr.2_5end | |association_with_transcript=-109bp_to_ENST00000359579,NM_020299,uc003vrr.2_5end | ||
|cluster_id=chr7:134212226..134212234,+ | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_5_at_AKR1B10_5end | |description=CAGE_peak_5_at_AKR1B10_5end | ||
|id=chr7:134212226..134212234,+ | |id=chr7:134212226..134212234,+ | ||
|ontology_enrichment_celltype=CL:0000319!6.73e-11!1;CL:0000181!2.32e-07!12;CL:0000417!2.32e-07!12;CL:0000668!2.32e-07!12;CL:0000414!2.32e-07!12;CL:0000412!2.32e-07!12;CL:0000182!2.32e-07!12 | |ontology_enrichment_celltype=CL:0000319!6.73e-11!1;CL:0000181!2.32e-07!12;CL:0000417!2.32e-07!12;CL:0000668!2.32e-07!12;CL:0000414!2.32e-07!12;CL:0000412!2.32e-07!12;CL:0000182!2.32e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000319;1.84e-34;1!CL:0000159;5.48e-18;2!CL:0000082;5.83e-08;19!CL:0002149;8.72e-07;6!CL:0002255;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.84e-34,1;CL:0000159,5.48e-18,2;CL:0000082,5.73e-08,19;CL:0002149,9.49e-07,6;CL:0002255,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0001041;4.00e-18;30!UBERON:0009497;3.94e-11;13 | |||
|ontology_enrichment_disease=DOID:3030!6.73e-11!1;DOID:3151!1.89e-10!1;DOID:3149!1.89e-10!1;DOID:5662!2.74e-10!1;DOID:305!9.45e-09!106;DOID:0050687!2.79e-07!143;DOID:162!2.99e-07!235;DOID:14566!4.82e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.84e-34;1!DOID:4556;2.74e-12;3!DOID:1324;7.92e-10;15!DOID:0050615;2.83e-09;16!DOID:3908;6.78e-08;5!DOID:3001;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.84e-34,1;DOID:4556,2.59e-12,3;DOID:305,1.24e-11,106;DOID:1324,7.75e-10,15;DOID:0050615,2.77e-09,16;DOID:0050687,1.02e-08,143;DOID:3908,6.55e-08,5;DOID:3001,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.84e-08!129;UBERON:0004185!3.84e-08!129;UBERON:0001041!8.42e-08!98;UBERON:0001007!1.08e-07!155;UBERON:0001555!1.08e-07!155;UBERON:0007026!1.08e-07!155;UBERON:0004119!7.00e-07!169;UBERON:0000925!7.00e-07!169;UBERON:0006595!7.00e-07!169;UBERON:0008835!7.55e-07!22;UBERON:0003894!7.55e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.50e-09;4!UBERON:0003928;1.50e-09;4!UBERON:0004802;5.83e-08;19!UBERON:0000115;5.83e-08;19!UBERON:0002048;5.32e-07;22!UBERON:0004807;5.32e-07;22!UBERON:0000117;5.32e-07;22!UBERON:0000171;5.32e-07;22!UBERON:0000170;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,5.73e-08,19;UBERON:0000115,5.73e-08,19;UBERON:0002048,5.24e-07,22;UBERON:0000117,5.24e-07,22;UBERON:0000171,5.24e-07,22;UBERON:0000170,5.24e-07,22;UBERON:0005597,5.24e-07,22;UBERON:0000118,5.24e-07,22;UBERON:0005911,5.45e-07,82;UBERON:0008835,5.57e-07,22;UBERON:0003894,5.57e-07,22;UBERON:0002394,8.97e-07,6;UBERON:0003928,8.97e-07,6 | |||
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|short_description=p5@AKR1B10 | |short_description=p5@AKR1B10 | ||
}} | }} |
Latest revision as of 11:14, 16 September 2015
Short description: | p5@AKR1B10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AKR1B10_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | -109bp_to_ENST00000359579, NM_020299, uc003vrr.2_5end |
EntrezGene: | AKR1B10 |
HGNC: | 382 |
UniProt: | O60218 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.84e-34 | 1 |
seromucus secreting cell | 5.48e-18 | 2 |
epithelial cell of lung | 5.73e-08 | 19 |
epithelial cell of uterus | 9.49e-07 | 6 |
stromal cell of endometrium | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 5.73e-08 | 19 |
lung epithelium | 5.73e-08 | 19 |
lung | 5.24e-07 | 22 |
respiratory tube | 5.24e-07 | 22 |
respiration organ | 5.24e-07 | 22 |
pair of lungs | 5.24e-07 | 22 |
lung primordium | 5.24e-07 | 22 |
lung bud | 5.24e-07 | 22 |
endo-epithelium | 5.45e-07 | 82 |
hepatic diverticulum | 5.57e-07 | 22 |
liver primordium | 5.57e-07 | 22 |
bile duct | 8.97e-07 | 6 |
digestive system duct | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.84e-34 | 1 |
lung large cell carcinoma | 2.59e-12 | 3 |
carcinoma | 1.24e-11 | 106 |
lung cancer | 7.75e-10 | 15 |
respiratory system cancer | 2.77e-09 | 16 |
cell type cancer | 1.02e-08 | 143 |
non-small cell lung carcinoma | 6.55e-08 | 5 |
female reproductive endometrioid cancer | 9.49e-07 | 6 |