FFCP PHASE1:Hg19::chr7:3340989..3340998,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221935 | |EntrezGene=221935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19307 | |HGNC=19307 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5N4,C9JV80 | |UniProt=Q7Z5N4,C9JV80 | ||
|association_with_transcript=-81bp_to_ENST00000404826,ENST00000446104,NM_152744,uc003smx.2_5end | |association_with_transcript=-81bp_to_ENST00000404826,ENST00000446104,NM_152744,uc003smx.2_5end | ||
|cluster_id=chr7:3340989..3340998,+ | |||
|description=CAGE_peak_6_at_SDK1_5end | |description=CAGE_peak_6_at_SDK1_5end | ||
|id=chr7:3340989..3340998,+ | |id=chr7:3340989..3340998,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.07e-13;2!CL:0000083;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.07e-13,2;CL:0000083,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.07e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;5.92e-26;1!DOID:0050619;5.92e-26;1!DOID:10165;5.92e-26;1!DOID:1357;5.92e-26;1!DOID:1798;5.92e-26;1!DOID:1793;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.78e-26,1;DOID:1357,2.78e-26,1;DOID:1799,1.26e-25,1;DOID:10165,1.26e-25,1;DOID:1798,1.26e-25,1;DOID:1793,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.24e-09!115;UBERON:0003350!1.65e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.92e-26;1!UBERON:0001764;5.92e-26;1!UBERON:0001825;5.92e-26;1!UBERON:0000002;1.85e-17;6!UBERON:0001560;1.85e-17;6!UBERON:0006955;1.07e-13;2!UBERON:0004801;1.07e-13;2!UBERON:0004175;2.70e-11;21!UBERON:0003135;4.62e-10;11!UBERON:0002106;1.41e-09;3!UBERON:0006947;1.41e-09;3!UBERON:0004054;1.41e-09;3!UBERON:0003133;5.16e-09;44!UBERON:0005904;1.69e-07;4!UBERON:0002553;5.78e-07;52!UBERON:0000995;8.84e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.78e-26,1;UBERON:0001825,2.78e-26,1;UBERON:0001301,4.61e-26,1;UBERON:0000002,2.19e-17,6;UBERON:0001560,2.19e-17,6;UBERON:0006955,1.07e-13,2;UBERON:0004801,1.07e-13,2;UBERON:0002553,1.90e-10,61;UBERON:0003135,4.42e-10,11;UBERON:0002106,1.19e-09,3;UBERON:0004854,1.19e-09,3;UBERON:0009034,1.19e-09,3;UBERON:0002095,1.19e-09,3;UBERON:0004782,1.19e-09,3;UBERON:0003281,1.19e-09,3;UBERON:0009664,1.19e-09,3;UBERON:0002296,1.19e-09,3;UBERON:0005602,1.19e-09,3;UBERON:0001179,1.19e-09,3;UBERON:0006293,1.19e-09,3;UBERON:0006947,1.30e-09,3;UBERON:0004054,1.30e-09,3;UBERON:0004175,1.39e-09,25;UBERON:0003887,2.77e-09,12;UBERON:0003133,1.04e-08,48;UBERON:0003886,8.61e-08,54;UBERON:0005904,1.59e-07,4;UBERON:0005156,3.74e-07,59;UBERON:0000990,3.74e-07,59 | |||
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| ||
|short_description=p6@SDK1 | |short_description=p6@SDK1 | ||
}} | }} |
Latest revision as of 08:24, 18 September 2015
Short description: | p6@SDK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SDK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -81bp_to_ENST00000404826, ENST00000446104, NM_152744, uc003smx.2_5end |
EntrezGene: | SDK1 |
HGNC: | 19307 |
UniProt: | Q7Z5N4C9JV80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.07e-13 | 2 |
epithelial cell of pancreas | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.78e-26 | 1 |
paranasal sinus | 2.78e-26 | 1 |
epididymis | 4.61e-26 | 1 |
uterine cervix | 2.19e-17 | 6 |
neck of organ | 2.19e-17 | 6 |
uterine epithelium | 1.07e-13 | 2 |
cervix epithelium | 1.07e-13 | 2 |
anatomical cavity | 1.90e-10 | 61 |
male reproductive organ | 4.42e-10 | 11 |
spleen | 1.19e-09 | 3 |
gastrointestinal system mesentery | 1.19e-09 | 3 |
stomach region | 1.19e-09 | 3 |
mesentery | 1.19e-09 | 3 |
gastrointestinal system serosa | 1.19e-09 | 3 |
mesentery of stomach | 1.19e-09 | 3 |
gut mesentery | 1.19e-09 | 3 |
dorsal mesentery | 1.19e-09 | 3 |
dorsal mesogastrium | 1.19e-09 | 3 |
peritoneal cavity | 1.19e-09 | 3 |
spleen primordium | 1.19e-09 | 3 |
male genital duct | 1.30e-09 | 3 |
internal male genitalia | 1.30e-09 | 3 |
internal genitalia | 1.39e-09 | 25 |
intraembryonic coelom | 2.77e-09 | 12 |
reproductive organ | 1.04e-08 | 48 |
body cavity precursor | 8.61e-08 | 54 |
duct of male reproductive system | 1.59e-07 | 4 |
reproductive structure | 3.74e-07 | 59 |
reproductive system | 3.74e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.78e-26 | 1 |
maxillary sinus cancer | 2.78e-26 | 1 |
islet cell tumor | 1.26e-25 | 1 |
endocrine pancreas cancer | 1.26e-25 | 1 |
pancreatic endocrine carcinoma | 1.26e-25 | 1 |
pancreatic cancer | 2.04e-07 | 4 |