FFCP PHASE1:Hg19::chr22:50624376..50624387,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80305 | |EntrezGene=80305 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28805 | |HGNC=28805 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003bjt.1_5end | |association_with_transcript=0bp_to_uc003bjt.1_5end | ||
|cluster_id=chr22:50624376..50624387,+ | |||
|description=CAGE_peak_4_at_TRABD_5end | |description=CAGE_peak_4_at_TRABD_5end | ||
|id=chr22:50624376..50624387,+ | |id=chr22:50624376..50624387,+ | ||
|ontology_enrichment_celltype=CL:0000037!5.91e-23!172;CL:0000566!5.91e-23!172;CL:0000988!1.56e-22!182;CL:0000738!5.42e-22!140;CL:0002032!1.70e-20!165;CL:0000837!1.70e-20!165;CL:0002087!4.76e-18!119;CL:0002057!1.18e-16!42;CL:0000763!1.35e-15!112;CL:0000049!1.35e-15!112;CL:0000766!3.38e-15!76;CL:0000860!3.71e-15!45;CL:0002031!4.97e-15!124;CL:0002194!7.64e-13!63;CL:0000576!7.64e-13!63;CL:0000040!7.64e-13!63;CL:0000559!7.64e-13!63;CL:0002009!7.95e-13!65;CL:0000557!1.07e-11!71;CL:0000839!3.31e-11!70 | |ontology_enrichment_celltype=CL:0000037!5.91e-23!172;CL:0000566!5.91e-23!172;CL:0000988!1.56e-22!182;CL:0000738!5.42e-22!140;CL:0002032!1.70e-20!165;CL:0000837!1.70e-20!165;CL:0002087!4.76e-18!119;CL:0002057!1.18e-16!42;CL:0000763!1.35e-15!112;CL:0000049!1.35e-15!112;CL:0000766!3.38e-15!76;CL:0000860!3.71e-15!45;CL:0002031!4.97e-15!124;CL:0002194!7.64e-13!63;CL:0000576!7.64e-13!63;CL:0000040!7.64e-13!63;CL:0000559!7.64e-13!63;CL:0002009!7.95e-13!65;CL:0000557!1.07e-11!71;CL:0000839!3.31e-11!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.71e-39;33!CL:0002057;4.71e-39;33!CL:0000473;1.41e-28;39!CL:0000234;1.41e-28;39!CL:0000576;1.95e-21;48!CL:0000766;1.89e-14;69!CL:0000763;1.42e-11;100!CL:0000094;5.09e-10;8!CL:0002087;6.17e-10;104!CL:0000738;6.52e-10;136!CL:0000081;1.39e-09;11!CL:0000784;3.13e-08;3!CL:0000451;3.91e-07;10!CL:0000988;8.87e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.50e-41,72;CL:0000860,5.18e-38,42;CL:0002057,5.18e-38,42;CL:0000763,1.06e-36,108;CL:0000049,1.06e-36,108;CL:0002009,8.12e-35,61;CL:0000473,2.06e-34,48;CL:0000234,2.06e-34,48;CL:0000037,2.66e-34,168;CL:0000738,6.16e-34,136;CL:0002194,6.48e-34,59;CL:0000576,6.48e-34,59;CL:0000040,6.48e-34,59;CL:0000559,6.48e-34,59;CL:0000988,3.36e-33,177;CL:0000557,7.99e-33,67;CL:0000839,2.82e-31,66;CL:0002032,5.27e-29,161;CL:0000837,5.27e-29,161;CL:0002087,6.78e-24,115;CL:0002031,5.34e-21,120;CL:0000134,6.67e-11,354;CL:0002320,2.20e-10,361;CL:0000094,3.55e-10,8;CL:0000081,1.05e-09,11;CL:0000219,1.40e-08,386;CL:0000784,3.26e-08,3;CL:0000034,5.03e-08,441;CL:0000048,7.57e-08,427;CL:0000723,1.61e-07,433;CL:0000451,5.86e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-26;42!CL:0000049;1.62e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!2.69e-07!51;DOID:0060083!2.69e-07!51 | |ontology_enrichment_disease=DOID:2531!2.69e-07!51;DOID:0060083!2.69e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.37e-10!102;UBERON:0003061!1.37e-10!102;UBERON:0002193!5.97e-09!112;UBERON:0002371!1.74e-08!80;UBERON:0001474!3.37e-08!86 | |ontology_enrichment_uberon=UBERON:0002390!1.37e-10!102;UBERON:0003061!1.37e-10!102;UBERON:0002193!5.97e-09!112;UBERON:0002371!1.74e-08!80;UBERON:0001474!3.37e-08!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.65e-28,76;UBERON:0002390,2.89e-25,98;UBERON:0003061,2.89e-25,98;UBERON:0001474,5.62e-25,82;UBERON:0002193,3.01e-23,108;UBERON:0002405,3.02e-22,93;UBERON:0004765,7.19e-22,90;UBERON:0001434,1.07e-18,100;UBERON:0003081,2.48e-12,203;UBERON:0002384,1.11e-09,371;UBERON:0002204,1.47e-09,167 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0.522371256399677,0.982935746006035,3.48900583986214,0.436882744260345,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0.251085279189606,0.382067028739756,0.328402357799783,0.472264687882075,1.57345710739562,1.15148819429164,0.928896739896456,0,0,0.739508020333575,0.387336002901508,0.426507697462265,0,1.10799081706375,1.80490002723128,0.651032612147555,0,0,0,1.74477886535478,1.13362783106643,2.42584061187816,1.16214518452842,0.822335776043652,1.54853185447552,2.3015391385772,1.5369642391746,3.31075121844019,2.41321976515633,1.29096936716765,0,2.82363509313907,1.63743690034707,1.34834090667051,2.44867113896722,3.53021929783703,5.11469700639233,2.63881040149373,0.997318288108159,2.98357325372886,1.45104619314292,2.26954089876456,1.24564449799115,2.00998932205395,1.5644487552606,2.38907729175628,1.21079900526674,2.57794345191295,1.26584954976354,0,0.850417199860174,0,0,0.901061357049038,0.16072558669708,0,0.19891667719909,0.547992461293902,1.75996244461323,0,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0,0.569212969109448,2.34894875748376,0.764546456250458,0,1.12101712596307,1.05353633910031,0.786839080455332,0.786021525498329,0,0.668745981562712,0,0,1.94826728407911,1.11410456885174,0,0.221533894583621,0.270803863765016,2.30564375506215,0.910415432919148,0,0.829050053357545,0.579606171470105,0,0,0,2.26618685395132,0,0.34362744548263,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0.821127996921047,0.604820229674197,0.802320587350522,0.724122019413995,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0.741568885568859,0.324547393654683,1.0447784237956,1.32957960518865,2.62339686735876,2.28797964312051,3.34311751196608,0,0,0,0.56530794192401,0,0.550236083880135,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0.366403487860815,5.27121669744253,15.511210565933,0.872188104285069,0,0.25326102332916,1.19168262731897,0.286836620748814,0.709336764396714,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0.490385709340376,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0.211931901159562,0,0.103052529238439,1.03056216018252,0.18611685633159,0.168776332241266,0,0.252433774244115,0,0,0,0.201504196455281,0.169560592310488,0.386521706326594,0.545492241181669,0.573609190778008,0.365921118388786,0.132529768321485,0.232387885739037,0.518305275076852,0.252320850875628,1.09493207722749,0,0,1.38134921352481,0,0.721879481669586,0.828147600278907,0.505754070234305,0.482022059766964,0.55146986366197,0.217879444092406,0.474541238222193,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,1.7658523976586,0.245976877086227,0,0.329250856225877,0,0.201057944823262,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0,0,0,0,0.766765358330422,0,1.32072651019839,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,1.62786481617433,0.823240336780769,0,0,0.791951872933429,0.904318131178758,0,0.499864955910285,0,1.00451418286425,0,0,0,0,0.289562613335158,0.205476322550383,0,0.448340575974109,0.591092280605782,0.862510299438069,1.15508732651774,0,0,0,0,0,1.49801404789436,0,2.90090859405225,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0.620304078368662,1.50999940573032,1.70764092485511,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.241718899183244,1.00253235151642,0.276242966807689,0,0.364182336013434,0.393373244878272,0.902399225814824,0.15403067420883,1.56869953835371,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0,0.307007349452259,0,0,0,0.170453254832202,0,0.495854746082934,0.192190067365106,0.255225424989168,0.2023155617111,0.464845549297286,0,1.3940745403212,0,1.06461206063404,0,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.808729926293264,0,0,0,0.731140468893853,2.11300293513511,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0.92947049429925,0.563391205064483,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0.670302275535787,0,0,1.72202149068492,0,0,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0,0,0.540031437238115,0,0.534120355637366,0,0.245040215981032,2.41544127663434,0.577076851905779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| ||
|short_description=p4@TRABD | |short_description=p4@TRABD | ||
}} | }} |
Latest revision as of 19:11, 15 September 2015
Short description: | p4@TRABD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRABD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003bjt.1_5end |
EntrezGene: | TRABD |
HGNC: | 28805 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.65e-28 | 76 |
hematopoietic system | 2.89e-25 | 98 |
blood island | 2.89e-25 | 98 |
bone element | 5.62e-25 | 82 |
hemolymphoid system | 3.01e-23 | 108 |
immune system | 3.02e-22 | 93 |
skeletal element | 7.19e-22 | 90 |
skeletal system | 1.07e-18 | 100 |
lateral plate mesoderm | 2.48e-12 | 203 |
connective tissue | 1.11e-09 | 371 |
musculoskeletal system | 1.47e-09 | 167 |