FFCP PHASE1:Hg19::chr2:102972723..102972746,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8809 | |EntrezGene=8809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5988 | |HGNC=5988 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=218bp_to_ENST00000466357_5end | |association_with_transcript=218bp_to_ENST00000466357_5end | ||
|cluster_id=chr2:102972723..102972746,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_6_at_IL18R1_5end | |description=CAGE_peak_6_at_IL18R1_5end | ||
|id=chr2:102972723..102972746,+ | |id=chr2:102972723..102972746,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.75e-17!140;CL:0000037!1.26e-12!172;CL:0000566!1.26e-12!172;CL:0000988!5.13e-11!182;CL:0000791!8.72e-11!18;CL:0000789!8.72e-11!18;CL:0002420!8.72e-11!18;CL:0002419!8.72e-11!18;CL:0000790!8.72e-11!18;CL:0000838!1.49e-10!52;CL:0002087!2.17e-10!119;CL:0000542!3.27e-10!53;CL:0000051!3.27e-10!53;CL:0002032!3.36e-10!165;CL:0000837!3.36e-10!165;CL:0002031!2.01e-09!124;CL:0000094!3.26e-09!8;CL:0000084!4.55e-09!25;CL:0000827!4.55e-09!25 | |ontology_enrichment_celltype=CL:0000738!5.75e-17!140;CL:0000037!1.26e-12!172;CL:0000566!1.26e-12!172;CL:0000988!5.13e-11!182;CL:0000791!8.72e-11!18;CL:0000789!8.72e-11!18;CL:0002420!8.72e-11!18;CL:0002419!8.72e-11!18;CL:0000790!8.72e-11!18;CL:0000838!1.49e-10!52;CL:0002087!2.17e-10!119;CL:0000542!3.27e-10!53;CL:0000051!3.27e-10!53;CL:0002032!3.36e-10!165;CL:0000837!3.36e-10!165;CL:0002031!2.01e-09!124;CL:0000094!3.26e-09!8;CL:0000084!4.55e-09!25;CL:0000827!4.55e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0000094;8.39e-28;8!CL:0000784;3.69e-20;3!CL:0000081;4.37e-20;11!CL:0000775;1.34e-19;3!CL:0000624;2.20e-16;6!CL:0000771;6.45e-14;2!CL:0000451;1.29e-09;10!CL:0000898;4.87e-09;3!CL:0000791;3.37e-08;18!CL:0000789;3.37e-08;18!CL:0002419;3.37e-08;18!CL:0000895;1.47e-07;1!CL:0000946;3.10e-07;1!CL:0000786;3.10e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.42e-28,8;CL:0000081,3.19e-20,11;CL:0000784,3.70e-20,3;CL:0000775,1.08e-19,3;CL:0000624,1.81e-16,6;CL:0000771,6.26e-14,2;CL:0000738,6.94e-11,136;CL:0000451,1.29e-09,10;CL:0000037,3.09e-09,168;CL:0000898,4.88e-09,3;CL:0000988,1.42e-08,177;CL:0000791,2.95e-08,18;CL:0000789,2.95e-08,18;CL:0002420,2.95e-08,18;CL:0002419,2.95e-08,18;CL:0000790,2.95e-08,18;CL:0000810,1.25e-07,1;CL:0000895,1.25e-07,1;CL:0002436,1.25e-07,1;CL:0002427,1.25e-07,1;CL:0002428,1.25e-07,1;CL:0002429,1.25e-07,1;CL:0002433,1.25e-07,1;CL:0002431,1.25e-07,1;CL:0002432,1.25e-07,1;CL:0000946,4.09e-07,1;CL:0000786,4.09e-07,1;CL:0000980,4.09e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.37e-08;18!CL:0002427;1.47e-07;1!UBERON:0005754;1.47e-07;1!UBERON:0010115;3.10e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;3.10e-07;1!DOID:0050177;3.10e-07;1!DOID:0050427;3.10e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.95e-07,1;DOID:0050177,1.95e-07,1;DOID:0050427,1.95e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.67e-09!115;UBERON:0004177!5.32e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.98e-09;3!UBERON:0000029;1.00e-07;1!UBERON:0000998;1.47e-07;1!UBERON:0002171;1.47e-07;1!UBERON:0006868;1.47e-07;1!UBERON:0006518;1.47e-07;1!UBERON:0008949;1.47e-07;1!UBERON:0000101;1.47e-07;1!UBERON:0002167;1.47e-07;1!UBERON:0002363;3.10e-07;1!UBERON:0000996;3.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.52e-09,3;UBERON:0004854,3.52e-09,3;UBERON:0009034,3.52e-09,3;UBERON:0002095,3.52e-09,3;UBERON:0004782,3.52e-09,3;UBERON:0003281,3.52e-09,3;UBERON:0009664,3.52e-09,3;UBERON:0002296,3.52e-09,3;UBERON:0005602,3.52e-09,3;UBERON:0001179,3.52e-09,3;UBERON:0006293,3.52e-09,3;UBERON:0004177,1.57e-08,7;UBERON:0005057,1.57e-08,7;UBERON:0000029,1.03e-07,1;UBERON:0000998,1.33e-07,1;UBERON:0006868,1.33e-07,1;UBERON:0002171,1.42e-07,1;UBERON:0006518,1.42e-07,1;UBERON:0008949,1.42e-07,1;UBERON:0000101,1.42e-07,1;UBERON:0002167,1.42e-07,1;UBERON:0000996,2.83e-07,1;UBERON:0002363,4.34e-07,1;UBERON:0007645,4.34e-07,1;UBERON:0007647,4.34e-07,1;UBERON:0010115,4.34e-07,1 | |||
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| ||
|short_description=p6@IL18R1 | |short_description=p6@IL18R1 | ||
}} | }} |
Latest revision as of 02:22, 16 September 2015
Short description: | p6@IL18R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IL18R1_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 218bp_to_ENST00000466357_5end |
EntrezGene: | IL18R1 |
HGNC: | 5988 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.42e-28 | 8 |
blood cell | 3.19e-20 | 11 |
plasmacytoid dendritic cell | 3.70e-20 | 3 |
neutrophil | 1.08e-19 | 3 |
CD4-positive, alpha-beta T cell | 1.81e-16 | 6 |
eosinophil | 6.26e-14 | 2 |
leukocyte | 6.94e-11 | 136 |
dendritic cell | 1.29e-09 | 10 |
hematopoietic stem cell | 3.09e-09 | 168 |
naive T cell | 4.88e-09 | 3 |
hematopoietic cell | 1.42e-08 | 177 |
mature alpha-beta T cell | 2.95e-08 | 18 |
alpha-beta T cell | 2.95e-08 | 18 |
immature T cell | 2.95e-08 | 18 |
mature T cell | 2.95e-08 | 18 |
immature alpha-beta T cell | 2.95e-08 | 18 |
CD4-positive, alpha-beta thymocyte | 1.25e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.25e-07 | 1 |
mature CD4 single-positive thymocyte | 1.25e-07 | 1 |
resting double-positive thymocyte | 1.25e-07 | 1 |
double-positive blast | 1.25e-07 | 1 |
CD69-positive double-positive thymocyte | 1.25e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.25e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.25e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.25e-07 | 1 |
antibody secreting cell | 4.09e-07 | 1 |
plasma cell | 4.09e-07 | 1 |
plasmablast | 4.09e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.52e-09 | 3 |
gastrointestinal system mesentery | 3.52e-09 | 3 |
stomach region | 3.52e-09 | 3 |
mesentery | 3.52e-09 | 3 |
gastrointestinal system serosa | 3.52e-09 | 3 |
mesentery of stomach | 3.52e-09 | 3 |
gut mesentery | 3.52e-09 | 3 |
dorsal mesentery | 3.52e-09 | 3 |
dorsal mesogastrium | 3.52e-09 | 3 |
peritoneal cavity | 3.52e-09 | 3 |
spleen primordium | 3.52e-09 | 3 |
hemopoietic organ | 1.57e-08 | 7 |
immune organ | 1.57e-08 | 7 |
lymph node | 1.03e-07 | 1 |
seminal vesicle | 1.33e-07 | 1 |
seminal fluid secreting gland | 1.33e-07 | 1 |
lower lobe of right lung | 1.42e-07 | 1 |
right lung lobe | 1.42e-07 | 1 |
lower lobe of lung | 1.42e-07 | 1 |
lobe of lung | 1.42e-07 | 1 |
right lung | 1.42e-07 | 1 |
vagina | 2.83e-07 | 1 |
dura mater | 4.34e-07 | 1 |
future meninx | 4.34e-07 | 1 |
ectomeninx | 4.34e-07 | 1 |
future dura mater | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.95e-07 | 1 |
monogenic disease | 1.95e-07 | 1 |
xeroderma pigmentosum | 1.95e-07 | 1 |