FFCP PHASE1:Hg19::chr7:79998864..79998896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=948 | |EntrezGene=948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1663 | |HGNC=1663 | ||
|TSSclassifier=strong | |||
|UniProt=P16671 | |UniProt=P16671 | ||
|association_with_transcript=0bp_to_ENST00000435819,uc003uhc.2_5end | |association_with_transcript=0bp_to_ENST00000435819,uc003uhc.2_5end | ||
|cluster_id=chr7:79998864..79998896,+ | |||
|coexpression_cluster_id=C557 | |||
|description=CAGE_peak_12_at_CD36_5end | |description=CAGE_peak_12_at_CD36_5end | ||
|id=chr7:79998864..79998896,+ | |id=chr7:79998864..79998896,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.24e-20!24;CL:0005020!3.06e-18!6;CL:0002138!3.06e-18!6;CL:0005022!3.06e-18!6;CL:0000115!6.01e-17!35;CL:0002078!1.26e-12!44;CL:0002144!4.19e-10!3;CL:0000213!7.72e-09!57;CL:0000215!7.72e-09!57;CL:0000071!1.50e-08!18;CL:0002546!1.50e-08!18 | |ontology_enrichment_celltype=CL:0002139!2.24e-20!24;CL:0005020!3.06e-18!6;CL:0002138!3.06e-18!6;CL:0005022!3.06e-18!6;CL:0000115!6.01e-17!35;CL:0002078!1.26e-12!44;CL:0002144!4.19e-10!3;CL:0000213!7.72e-09!57;CL:0000215!7.72e-09!57;CL:0000071!1.50e-08!18;CL:0002546!1.50e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0002138;7.47e-44;6!CL:0002139;5.12e-29;24!CL:0002144;4.18e-23;3!CL:0000115;6.80e-14;36!CL:0002078;2.11e-12;45!CL:0000213;2.32e-07;58!CL:0000215;2.32e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,8.09e-44,6;CL:0002138,8.09e-44,6;CL:0005022,8.09e-44,6;CL:0002139,5.06e-29,24;CL:0002144,3.89e-23,3;CL:0000115,8.59e-19,36;CL:0002078,1.07e-14,45;CL:0000213,5.05e-11,58;CL:0000215,5.05e-11,58 | |||
|ontology_enrichment_development_v019=CL:0005022;7.47e-44;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!5.54e-18!10;UBERON:0007023!2.85e-17!115;UBERON:0001473!1.85e-13!8;UBERON:0004536!1.85e-13!8;UBERON:0006558!1.85e-13!8;UBERON:0001915!4.19e-10!3;UBERON:0001982!4.19e-10!3;UBERON:0000055!1.11e-08!69;UBERON:0001986!1.50e-08!18;UBERON:0004638!1.50e-08!18;UBERON:0004852!1.50e-08!18;UBERON:0002049!4.79e-07!79;UBERON:0007798!4.79e-07!79;UBERON:0000341!5.60e-07!2;UBERON:0000487!9.68e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002465;4.03e-35;10!UBERON:0001473;8.47e-33;8!UBERON:0004536;8.47e-33;8!UBERON:0006558;8.47e-33;8!UBERON:0010523;4.18e-23;3!UBERON:0001915;4.18e-23;3!UBERON:0001982;4.18e-23;3!UBERON:0000341;2.58e-15;2!UBERON:0002405;1.63e-12;27!UBERON:0000055;7.51e-09;65!UBERON:0005795;2.37e-08;1!UBERON:0000029;2.37e-08;1!UBERON:0002171;2.37e-08;1!UBERON:0006518;2.37e-08;1!UBERON:0008949;2.37e-08;1!UBERON:0000101;2.37e-08;1!UBERON:0002167;2.37e-08;1!UBERON:0002193;5.43e-07;42!UBERON:0002049;9.27e-07;75!UBERON:0007798;9.27e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,4.37e-35,10;UBERON:0001473,8.99e-33,8;UBERON:0004536,8.99e-33,8;UBERON:0006558,8.99e-33,8;UBERON:0010523,3.89e-23,3;UBERON:0001915,3.89e-23,3;UBERON:0001982,3.89e-23,3;UBERON:0000341,2.99e-15,2;UBERON:0000055,4.30e-11,68;UBERON:0002049,2.01e-09,78;UBERON:0007798,2.01e-09,78;UBERON:0002171,1.48e-08,1;UBERON:0006518,1.48e-08,1;UBERON:0008949,1.48e-08,1;UBERON:0000101,1.48e-08,1;UBERON:0002167,1.48e-08,1;UBERON:0000029,2.46e-08,1 | |||
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| ||
|short_description=p12@CD36 | |short_description=p12@CD36 | ||
}} | }} |
Latest revision as of 16:17, 19 September 2015
Short description: | p12@CD36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CD36_5end |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | 0bp_to_ENST00000435819, uc003uhc.2_5end |
EntrezGene: | CD36 |
HGNC: | 1663 |
UniProt: | P16671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 8.09e-44 | 6 |
endothelial cell of lymphatic vessel | 8.09e-44 | 6 |
vascular lymphangioblast | 8.09e-44 | 6 |
endothelial cell of vascular tree | 5.06e-29 | 24 |
capillary endothelial cell | 3.89e-23 | 3 |
endothelial cell | 8.59e-19 | 36 |
meso-epithelial cell | 1.07e-14 | 45 |
lining cell | 5.05e-11 | 58 |
barrier cell | 5.05e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 4.37e-35 | 10 |
lymphatic vessel | 8.99e-33 | 8 |
lymph vasculature | 8.99e-33 | 8 |
lymphatic part of lymphoid system | 8.99e-33 | 8 |
microcirculatory vessel | 3.89e-23 | 3 |
endothelium of capillary | 3.89e-23 | 3 |
capillary | 3.89e-23 | 3 |
throat | 2.99e-15 | 2 |
vessel | 4.30e-11 | 68 |
vasculature | 2.01e-09 | 78 |
vascular system | 2.01e-09 | 78 |
lower lobe of right lung | 1.48e-08 | 1 |
right lung lobe | 1.48e-08 | 1 |
lower lobe of lung | 1.48e-08 | 1 |
lobe of lung | 1.48e-08 | 1 |
right lung | 1.48e-08 | 1 |
lymph node | 2.46e-08 | 1 |