FFCP PHASE1:Hg19::chr2:157256772..157256818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:157256772..157256818,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr2:157256772..157256818,+ | |description=CAGE_peak_at_chr2:157256772..157256818,+ | ||
|id=chr2:157256772..157256818,+ | |id=chr2:157256772..157256818,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;2.73e-29;1!CL:0000164;2.73e-29;1!CL:0000502;2.73e-29;1!CL:0000172;2.73e-29;1!CL:0000173;2.73e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,4.20e-29,1;CL:0000164,4.20e-29,1;CL:0000502,4.20e-29,1;CL:0000172,4.20e-29,1;CL:0000173,4.20e-29,1;CL:0002351,4.20e-29,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.24e-85;3!CL:0002351;2.73e-29;1 | |||
|ontology_enrichment_disease=DOID:305!1.28e-08!106;DOID:0050687!6.23e-07!143 | |ontology_enrichment_disease=DOID:305!1.28e-08!106;DOID:0050687!6.23e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:4430;2.73e-29;1!DOID:5093;2.35e-08;4!DOID:1612;2.35e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.20e-29,1;DOID:5093,2.26e-08,4;DOID:1612,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.21e-39!57;UBERON:0005068!2.21e-39!57;UBERON:0006241!2.21e-39!57;UBERON:0007135!2.21e-39!57;UBERON:0002616!3.30e-33!59;UBERON:0002780!6.37e-33!41;UBERON:0001890!6.37e-33!41;UBERON:0006240!6.37e-33!41;UBERON:0003080!6.55e-32!42;UBERON:0005743!4.91e-31!86;UBERON:0000955!1.30e-30!69;UBERON:0006238!1.30e-30!69;UBERON:0001017!7.87e-30!82;UBERON:0003075!6.72e-29!86;UBERON:0007284!6.72e-29!86;UBERON:0000073!4.09e-28!94;UBERON:0001016!4.09e-28!94;UBERON:0001869!9.52e-28!32;UBERON:0001893!1.23e-27!34;UBERON:0002346!5.49e-27!90;UBERON:0007023!6.40e-27!115;UBERON:0002791!2.33e-26!33;UBERON:0002020!8.62e-26!34;UBERON:0003528!8.62e-26!34;UBERON:0000033!6.39e-24!123;UBERON:0003056!4.07e-22!61;UBERON:0000153!4.35e-22!129;UBERON:0007811!4.35e-22!129;UBERON:0000956!3.74e-20!25;UBERON:0000203!3.74e-20!25;UBERON:0002619!7.90e-19!22;UBERON:0004121!3.54e-17!169;UBERON:0000924!2.05e-16!173;UBERON:0006601!2.05e-16!173;UBERON:0001950!7.74e-16!20;UBERON:0000062!4.45e-12!511;UBERON:0004111!1.57e-11!241;UBERON:0000481!5.81e-11!347;UBERON:0000475!7.62e-11!365;UBERON:0000477!2.16e-10!286;UBERON:0000064!7.93e-10!219;UBERON:0000025!9.68e-09!194;UBERON:0003076!1.15e-08!15;UBERON:0003057!1.15e-08!15;UBERON:0000200!1.29e-07!6;UBERON:0002308!4.36e-07!9;UBERON:0000125!4.36e-07!9;UBERON:0002420!5.30e-07!9;UBERON:0007245!5.30e-07!9;UBERON:0010009!5.30e-07!9;UBERON:0010011!5.30e-07!9;UBERON:0000454!5.30e-07!9;UBERON:0004733!7.07e-07!12;UBERON:0002028!7.07e-07!12;UBERON:0007277!7.07e-07!12;UBERON:0000483!8.64e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.22e-43;6!UBERON:0002680;5.37e-29;9!UBERON:0001895;5.37e-29;9!UBERON:0004733;5.68e-22;12!UBERON:0002028;5.68e-22;12!UBERON:0004732;2.39e-20;13!UBERON:0001954;1.33e-15;2!UBERON:0003022;1.33e-15;2!UBERON:0002421;1.33e-15;2!UBERON:0002600;1.33e-15;2!UBERON:0002771;2.21e-15;2!UBERON:0000955;1.94e-08;68!UBERON:0000073;4.66e-08;53!UBERON:0002616;4.66e-08;53!UBERON:0000349;5.08e-07;5!UBERON:0001017;5.64e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.21e-43,6;UBERON:0006215,4.21e-43,6;UBERON:0002680,4.66e-29,9;UBERON:0001895,4.66e-29,9;UBERON:0010092,4.66e-29,9;UBERON:0004733,5.10e-22,12;UBERON:0002028,5.10e-22,12;UBERON:0007277,5.10e-22,12;UBERON:0004732,2.17e-20,13;UBERON:0003076,8.77e-18,15;UBERON:0003057,8.77e-18,15;UBERON:0001954,1.33e-15,2;UBERON:0003022,1.33e-15,2;UBERON:0002421,1.33e-15,2;UBERON:0002600,1.33e-15,2;UBERON:0002771,2.37e-15,2;UBERON:0000073,1.72e-13,53;UBERON:0002616,1.72e-13,53;UBERON:0001049,8.43e-13,56;UBERON:0005068,8.43e-13,56;UBERON:0006241,8.43e-13,56;UBERON:0007135,8.43e-13,56;UBERON:0000955,1.74e-10,68;UBERON:0006238,1.74e-10,68;UBERON:0001017,6.90e-09,81;UBERON:0003075,6.90e-09,82;UBERON:0007284,6.90e-09,82;UBERON:0002346,1.72e-08,86;UBERON:0001016,4.82e-08,89;UBERON:0010371,4.48e-07,104;UBERON:0000349,5.08e-07,5 | |||
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| ||
|short_description=p@chr2:157256772..157256818,+ | |short_description=p@chr2:157256772..157256818,+ | ||
}} | }} |
Latest revision as of 01:36, 29 July 2015
Short description: | p@chr2:157256772..157256818, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:157256772..157256818, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 4.20e-29 | 1 |
enteroendocrine cell | 4.20e-29 | 1 |
type D enteroendocrine cell | 4.20e-29 | 1 |
somatostatin secreting cell | 4.20e-29 | 1 |
pancreatic D cell | 4.20e-29 | 1 |
progenitor cell of endocrine pancreas | 4.20e-29 | 1 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.21e-43 | 6 |
rhombic lip | 4.21e-43 | 6 |
regional part of metencephalon | 4.66e-29 | 9 |
metencephalon | 4.66e-29 | 9 |
future metencephalon | 4.66e-29 | 9 |
segmental subdivision of hindbrain | 5.10e-22 | 12 |
hindbrain | 5.10e-22 | 12 |
presumptive hindbrain | 5.10e-22 | 12 |
segmental subdivision of nervous system | 2.17e-20 | 13 |
posterior neural tube | 8.77e-18 | 15 |
chordal neural plate | 8.77e-18 | 15 |
Ammon's horn | 1.33e-15 | 2 |
lobe parts of cerebral cortex | 1.33e-15 | 2 |
hippocampal formation | 1.33e-15 | 2 |
limbic lobe | 1.33e-15 | 2 |
middle temporal gyrus | 2.37e-15 | 2 |
regional part of nervous system | 1.72e-13 | 53 |
regional part of brain | 1.72e-13 | 53 |
neural tube | 8.43e-13 | 56 |
neural rod | 8.43e-13 | 56 |
future spinal cord | 8.43e-13 | 56 |
neural keel | 8.43e-13 | 56 |
brain | 1.74e-10 | 68 |
future brain | 1.74e-10 | 68 |
central nervous system | 6.90e-09 | 81 |
neural plate | 6.90e-09 | 82 |
presumptive neural plate | 6.90e-09 | 82 |
neurectoderm | 1.72e-08 | 86 |
nervous system | 4.82e-08 | 89 |
ecto-epithelium | 4.48e-07 | 104 |
limbic system | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.20e-29 | 1 |
thoracic cancer | 2.26e-08 | 4 |
breast cancer | 2.26e-08 | 4 |