FFCP PHASE1:Hg19::chr8:90914270..90914310,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=734 | |EntrezGene=734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1355 | |HGNC=1355 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y236 | |UniProt=Q9Y236 | ||
|association_with_transcript=174bp_to_NM_004337,uc003yeg.2_5end | |association_with_transcript=174bp_to_NM_004337,uc003yeg.2_5end | ||
|cluster_id=chr8:90914270..90914310,+ | |||
|description=CAGE_peak_4_at_OSGIN2_5end | |description=CAGE_peak_4_at_OSGIN2_5end | ||
|id=chr8:90914270..90914310,+ | |id=chr8:90914270..90914310,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.55e-18!52;CL:0000542!2.56e-18!53;CL:0000051!2.56e-18!53;CL:0000738!7.51e-11!140;CL:0000791!1.12e-10!18;CL:0000789!1.12e-10!18;CL:0002420!1.12e-10!18;CL:0002419!1.12e-10!18;CL:0000790!1.12e-10!18;CL:0000084!1.90e-10!25;CL:0000827!1.90e-10!25;CL:0000066!9.06e-10!254;CL:0002076!1.75e-09!43;CL:0000945!9.91e-08!24;CL:0000826!9.91e-08!24;CL:0000223!1.78e-07!59;CL:0000625!1.84e-07!11;CL:0002087!3.82e-07!119;CL:0000037!5.70e-07!172;CL:0000566!5.70e-07!172;CL:0002031!9.25e-07!124 | |ontology_enrichment_celltype=CL:0000838!2.55e-18!52;CL:0000542!2.56e-18!53;CL:0000051!2.56e-18!53;CL:0000738!7.51e-11!140;CL:0000791!1.12e-10!18;CL:0000789!1.12e-10!18;CL:0002420!1.12e-10!18;CL:0002419!1.12e-10!18;CL:0000790!1.12e-10!18;CL:0000084!1.90e-10!25;CL:0000827!1.90e-10!25;CL:0000066!9.06e-10!254;CL:0002076!1.75e-09!43;CL:0000945!9.91e-08!24;CL:0000826!9.91e-08!24;CL:0000223!1.78e-07!59;CL:0000625!1.84e-07!11;CL:0002087!3.82e-07!119;CL:0000037!5.70e-07!172;CL:0000566!5.70e-07!172;CL:0002031!9.25e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.72e-13;18!CL:0000789;2.72e-13;18!CL:0002419;2.72e-13;18!CL:0000625;1.72e-09;11!CL:0000084;3.53e-09;25!CL:0000542;4.81e-09;53!CL:0002076;6.24e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.76e-15,52;CL:0000542,1.18e-14,53;CL:0000051,1.18e-14,53;CL:0000791,1.46e-13,18;CL:0000789,1.46e-13,18;CL:0002420,1.46e-13,18;CL:0002419,1.46e-13,18;CL:0000790,1.46e-13,18;CL:0002076,2.25e-11,42;CL:0000066,8.10e-10,253;CL:0000625,1.72e-09,11;CL:0000084,2.86e-09,25;CL:0000827,2.86e-09,25;CL:0000223,4.19e-08,58;CL:0000624,8.08e-07,6;CL:0000738,8.78e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;2.72e-13;18!CL:0000051;4.81e-09;53 | |||
|ontology_enrichment_disease=DOID:305!1.30e-18!106;DOID:0050687!1.10e-10!143;DOID:1749!1.68e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.21e-13;14!DOID:299;9.75e-08;25!DOID:305;2.36e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.86e-17,106;DOID:1749,4.49e-13,14;DOID:0050687,1.02e-10,143;DOID:299,4.22e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.31e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-07;15!UBERON:0000179;1.17e-07;15!UBERON:0000463;1.17e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.23e-07,15;UBERON:0000179,1.23e-07,15;UBERON:0000463,1.23e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0.655324116390517,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,1.29902789771517,0.985207073399349,1.18066171970519,1.96682138424452,0.767658796194425,0.619264493264304,1.83884244895785,0.90361775633475,0.739508020333575,1.16200800870452,0.995184627411951,0.587200878669695,0.553995408531877,1.00272223735071,0.868043482863407,0,0,0.257575567634187,0.290796477559129,0,0.485168122375632,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0.622822248995575,0,0,1.3031330682307,1.21079900526674,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0.285012743741249,0,0,1.75996244461323,1.63841583378639,0.889509253863555,4.26730222566507,4.40435585739614,1.14950487990897,1.32208974556972,1.90810750907073,2.27685187643779,3.52342313622563,2.6759125968766,0,1.12101712596307,0,3.73748563216283,6.28817220398664,6.99045096598331,3.00935691703221,2.93330039970231,2.36723902867367,3.89653456815823,1.11410456885174,1.47302953737419,3.1014745241707,0.541607727530031,2.17755243533648,1.1705341280389,0.986627427622057,2.21080014228679,2.31842468588042,4.44859689486181,4.28065324943541,8.36284190439814,1.0197840842781,1.91610246800961,2.40539211837841,5.81945291644857,1.27426165729639,3.25541726928209,0.950452044448374,4.06552821509986,3.19966527886046,3.74792179657038,2.8413270245282,3.28451198768419,4.03213486449465,4.54648332831962,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.523916301990851,0,0.741568885568859,0,0,0,5.48528435902286,2.28797964312051,5.57186251994347,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.966304265816484,1.90922284413584,3.44165514466805,1.09776335516636,2.51806559810822,0.929551542956147,1.45125477021519,1.51392510525377,2.91981887260664,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,2.82873408649161,0,2.19500570817251,0,1.40740561376283,1.11106134190236,0,0,0,0.231860809950154,0.234817388471643,0,0,0.190254152234598,5.53143078571493,4.29243081047436,0,0,0,1.87467667973554,3.52762469217605,2.55195175036296,0.895585227028483,3.77824120068151,3.06706143332169,0,0.176096868026452,0.207328115540772,1.29707958075265,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.448340575974109,3.15249216323084,3.66566877261179,2.05348858047597,0,1.30139853857622,0,0,0,3.74503511973591,8.97484377612075,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,3.51505644408909,1.50999940573032,1.81436848265855,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,1.0877350463246,1.40354529212299,1.84161977871793,0,0,0,1.35359883872224,2.0794141018192,0.784349769176855,0,2.53323909342902,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0.509752546090077,0.831076008928724,0.223874754722178,0,0.784306353074702,0,0.328014645699706,0,0.824328093181778,0,0.082509499920588,1.72279661398852,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,3.14041339185858,1.92190067365106,3.82838137483752,2.023155617111,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,1.25088746543166,2.01090682660736,2.17781969722645,0.470719003883896,2.15252686335615,0,0,2.29723400206959,3.04468565539302,1.52927441428475,1.70894156152249,2.1440859791201,3.29089818468955,3.24236655596359,1.08006287447623,2.37937552888281,0.320472213382419,0,4.6557641036396,0.371606350251437,0.144269212976445,0.142283686696828,0.318852545457645,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0.278406173895242,0,0,0.33307196799782,0,2.99424864653152,0,0,0.66866030566487,0,4.53614521001611,1.78178808499583,1.53580351049616,0,0.281338832821026,0.111308705022906,0.16480387422676,0.422250816255987,0,0.828851746593443,1.76352923497993,0.613612095012929,0.369254416383208,0,3.14539229015644,15.2167998474268,0,0,9.57932369387759,0,0.969332746095218,0.0927680981618513,0,5.98983850496036,10.7575799995321,0,1.365521379426,5.59358030644086,1.41832609060762,0,0,0,0,0.241192877250816,0,0.331737779793674,2.06883333267483,0.438770794307945,0.10893846351899,1.81250867562184,0.153900517007594,0.113942055847001,1.1528195219403,2.60297168788339,0.869178975376065,3.19001159731919,1.55715908783166,1.06606955203727,1.02193298195737,0.156980256395025,0.166211681900156,0.45119132123436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| ||
|short_description=p4@OSGIN2 | |short_description=p4@OSGIN2 | ||
}} | }} |
Latest revision as of 10:05, 19 September 2015
Short description: | p4@OSGIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OSGIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 174bp_to_NM_004337, uc003yeg.2_5end |
EntrezGene: | OSGIN2 |
HGNC: | 1355 |
UniProt: | Q9Y236 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.76e-15 | 52 |
lymphocyte | 1.18e-14 | 53 |
common lymphoid progenitor | 1.18e-14 | 53 |
mature alpha-beta T cell | 1.46e-13 | 18 |
alpha-beta T cell | 1.46e-13 | 18 |
immature T cell | 1.46e-13 | 18 |
mature T cell | 1.46e-13 | 18 |
immature alpha-beta T cell | 1.46e-13 | 18 |
endo-epithelial cell | 2.25e-11 | 42 |
epithelial cell | 8.10e-10 | 253 |
CD8-positive, alpha-beta T cell | 1.72e-09 | 11 |
T cell | 2.86e-09 | 25 |
pro-T cell | 2.86e-09 | 25 |
endodermal cell | 4.19e-08 | 58 |
CD4-positive, alpha-beta T cell | 8.08e-07 | 6 |
leukocyte | 8.78e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 1.23e-07 | 15 |
haemolymphatic fluid | 1.23e-07 | 15 |
organism substance | 1.23e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.86e-17 | 106 |
squamous cell carcinoma | 4.49e-13 | 14 |
cell type cancer | 1.02e-10 | 143 |
adenocarcinoma | 4.22e-08 | 25 |