FFCP PHASE1:Hg19::chr2:236405138..236405159,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:236405138..236405159,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr2:236405138..236405159,- | |description=CAGE_peak_at_chr2:236405138..236405159,- | ||
|id=chr2:236405138..236405159,- | |id=chr2:236405138..236405159,- | ||
|ontology_enrichment_celltype=CL:0000039!2.26e-31!7;CL:0000586!2.26e-31!7;CL:0002178!7.69e-10!3;CL:0000167!4.57e-08!1;CL:0000164!4.57e-08!1;CL:0000502!4.57e-08!1;CL:0000172!4.57e-08!1;CL:0000173!4.57e-08!1;CL:0002351!4.57e-08!1;CL:0000066!1.26e-07!254 | |ontology_enrichment_celltype=CL:0000039!2.26e-31!7;CL:0000586!2.26e-31!7;CL:0002178!7.69e-10!3;CL:0000167!4.57e-08!1;CL:0000164!4.57e-08!1;CL:0000502!4.57e-08!1;CL:0000172!4.57e-08!1;CL:0000173!4.57e-08!1;CL:0002351!4.57e-08!1;CL:0000066!1.26e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.35e-38;3!CL:0000167;9.99e-30;1!CL:0000164;9.99e-30;1!CL:0000502;9.99e-30;1!CL:0000172;9.99e-30;1!CL:0000173;9.99e-30;1!CL:0000082;6.29e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.80e-38,3;CL:0000167,9.99e-30,1;CL:0000164,9.99e-30,1;CL:0000502,9.99e-30,1;CL:0000172,9.99e-30,1;CL:0000173,9.99e-30,1;CL:0002351,9.99e-30,1;CL:0000082,6.01e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002351;9.99e-30;1!UBERON:0001041;3.46e-09;30 | |||
|ontology_enrichment_disease=DOID:3095!3.69e-17!22;DOID:2994!3.69e-17!22;DOID:0050687!1.16e-13!143;DOID:305!2.08e-10!106;DOID:162!1.36e-09!235;DOID:14566!2.68e-09!239;DOID:4430!4.57e-08!1;DOID:0050619!6.80e-08!1;DOID:1357!6.80e-08!1;DOID:3111!1.15e-07!1;DOID:3603!1.15e-07!1;DOID:5409!1.35e-07!4 | |ontology_enrichment_disease=DOID:3095!3.69e-17!22;DOID:2994!3.69e-17!22;DOID:0050687!1.16e-13!143;DOID:305!2.08e-10!106;DOID:162!1.36e-09!235;DOID:14566!2.68e-09!239;DOID:4430!4.57e-08!1;DOID:0050619!6.80e-08!1;DOID:1357!6.80e-08!1;DOID:3111!1.15e-07!1;DOID:3603!1.15e-07!1;DOID:5409!1.35e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:4430;9.99e-30;1!DOID:5409;3.92e-29;4!DOID:3119;6.89e-19;14!DOID:1325;3.86e-17;7!DOID:3904;3.86e-17;7!DOID:3493;1.15e-15;2!DOID:3905;1.44e-13;9!DOID:1324;1.56e-08;15!DOID:0050615;4.66e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.99e-30,1;DOID:5409,3.16e-29,4;DOID:3119,7.32e-19,14;DOID:1325,3.42e-17,7;DOID:3904,3.42e-17,7;DOID:3493,1.15e-15,2;DOID:3905,1.31e-13,9;DOID:0050687,6.71e-10,143;DOID:305,7.79e-10,106;DOID:1324,1.47e-08,15;DOID:0050615,4.42e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0001764!6.80e-08!1;UBERON:0001825!6.80e-08!1;UBERON:0000473!1.96e-07!8;UBERON:0002022!3.17e-07!1 | |ontology_enrichment_uberon=UBERON:0001764!6.80e-08!1;UBERON:0001825!6.80e-08!1;UBERON:0000473!1.96e-07!8;UBERON:0002022!3.17e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.21e-23;5!UBERON:0010039;1.21e-23;5!UBERON:0001041;4.12e-09;14!UBERON:0002394;2.35e-08;4!UBERON:0003928;2.35e-08;4!UBERON:0004802;6.29e-07;19!UBERON:0000115;6.29e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,3.79e-15,8;UBERON:0010039,3.79e-15,8;UBERON:0001041,1.87e-08,87;UBERON:0004802,6.01e-07,19;UBERON:0000115,6.01e-07,19 | |||
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|short_description=p@chr2:236405138..236405159,- | |short_description=p@chr2:236405138..236405159,- | ||
}} | }} |
Latest revision as of 08:05, 29 July 2015
Short description: | p@chr2:236405138..236405159, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:236405138..236405159, - |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.80e-38 | 3 |
peptide hormone secreting cell | 9.99e-30 | 1 |
enteroendocrine cell | 9.99e-30 | 1 |
type D enteroendocrine cell | 9.99e-30 | 1 |
somatostatin secreting cell | 9.99e-30 | 1 |
pancreatic D cell | 9.99e-30 | 1 |
progenitor cell of endocrine pancreas | 9.99e-30 | 1 |
epithelial cell of lung | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
stomach | 3.79e-15 | 8 |
food storage organ | 3.79e-15 | 8 |
foregut | 1.87e-08 | 87 |
respiratory tract epithelium | 6.01e-07 | 19 |
lung epithelium | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.99e-30 | 1 |
lung small cell carcinoma | 3.16e-29 | 4 |
gastrointestinal system cancer | 7.32e-19 | 14 |
bronchus cancer | 3.42e-17 | 7 |
bronchogenic carcinoma | 3.42e-17 | 7 |
signet ring cell adenocarcinoma | 1.15e-15 | 2 |
lung carcinoma | 1.31e-13 | 9 |
cell type cancer | 6.71e-10 | 143 |
carcinoma | 7.79e-10 | 106 |
lung cancer | 1.47e-08 | 15 |
respiratory system cancer | 4.42e-08 | 16 |