FFCP PHASE1:Hg19::chr2:240197666..240197678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:240197666..240197678,+ | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr2:240197666..240197678,+ | |description=CAGE_peak_at_chr2:240197666..240197678,+ | ||
|id=chr2:240197666..240197678,+ | |id=chr2:240197666..240197678,+ | ||
|ontology_enrichment_celltype=CL:0000860!5.89e-08!45;CL:0002057!1.37e-07!42 | |ontology_enrichment_celltype=CL:0000860!5.89e-08!45;CL:0002057!1.37e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.50e-25;33!CL:0002057;7.50e-25;33!CL:0000473;4.23e-18;39!CL:0000234;4.23e-18;39!CL:0000576;3.18e-14;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.94e-21,42;CL:0002057,1.94e-21,42;CL:0000473,1.23e-18,48;CL:0000234,1.23e-18,48;CL:0002194,1.05e-14,59;CL:0000576,1.05e-14,59;CL:0000040,1.05e-14,59;CL:0000559,1.05e-14,59;CL:0002009,3.39e-14,61;CL:0000839,4.65e-13,66;CL:0000557,7.50e-13,67;CL:0000766,6.73e-12,72;CL:0000763,1.32e-07,108;CL:0000049,1.32e-07,108;CL:0002087,4.43e-07,115;CL:0002031,9.68e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1325;7.81e-08;7!DOID:3904;7.81e-08;7!DOID:3493;4.83e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,7.81e-08,7;DOID:3904,7.81e-08,7;DOID:3493,4.98e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.22e-20!9;UBERON:0001557!1.45e-15!19;UBERON:0000072!2.67e-08!46;UBERON:0001004!3.65e-08!72;UBERON:0008947!7.90e-08!38;UBERON:0003258!7.90e-08!38;UBERON:0000065!9.58e-08!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.82e-13;1!UBERON:0000026;1.82e-13;1!UBERON:0008784;1.82e-13;1!UBERON:0006058;1.82e-13;1!UBERON:0003663;1.82e-13;1!UBERON:0004256;1.82e-13;1!UBERON:0004708;1.82e-13;1!UBERON:0002101;1.82e-13;1!UBERON:0004709;1.82e-13;1!UBERON:0002529;1.82e-13;1!UBERON:0010538;1.82e-13;1!UBERON:0003661;1.82e-13;1!UBERON:0010890;1.82e-13;1!UBERON:0002471;1.82e-13;1!UBERON:0001383;1.82e-13;1!UBERON:0010758;1.82e-13;1!UBERON:0010707;1.82e-13;1!UBERON:0000978;1.82e-13;1!UBERON:0002103;1.82e-13;1!UBERON:0001665;1.82e-13;1!UBERON:0003823;1.82e-13;1!UBERON:0000154;1.82e-13;1!UBERON:0010709;1.82e-13;1!UBERON:0005090;2.28e-07;2!UBERON:0001630;2.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.82e-13,1;UBERON:0001389,1.82e-13,1;UBERON:0000026,1.82e-13,1;UBERON:0008784,1.82e-13,1;UBERON:0006058,1.82e-13,1;UBERON:0003663,1.82e-13,1;UBERON:0004256,1.82e-13,1;UBERON:0004708,1.82e-13,1;UBERON:0002101,1.82e-13,1;UBERON:0004709,1.82e-13,1;UBERON:0002529,1.82e-13,1;UBERON:0010538,1.82e-13,1;UBERON:0003661,1.82e-13,1;UBERON:0010890,1.82e-13,1;UBERON:0002471,1.82e-13,1;UBERON:0001383,1.82e-13,1;UBERON:0004357,1.82e-13,1;UBERON:0004347,1.82e-13,1;UBERON:0005420,1.82e-13,1;UBERON:0005732,1.82e-13,1;UBERON:0010758,1.82e-13,1;UBERON:0010707,1.82e-13,1;UBERON:0000978,1.82e-13,1;UBERON:0002103,1.82e-13,1;UBERON:0001665,1.82e-13,1;UBERON:0003823,1.82e-13,1;UBERON:0000154,1.82e-13,1;UBERON:0010709,1.82e-13,1;UBERON:0005733,1.82e-13,1;UBERON:0005730,1.82e-13,1;UBERON:0002371,3.18e-11,76;UBERON:0001474,2.46e-10,82;UBERON:0004765,2.49e-09,90;UBERON:0002405,5.36e-09,93;UBERON:0002390,1.74e-08,98;UBERON:0003061,1.74e-08,98;UBERON:0001434,2.69e-08,100;UBERON:0002193,1.32e-07,108;UBERON:0005090,2.28e-07,2;UBERON:0001630,2.28e-07,2;UBERON:0002204,5.41e-07,167 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,3.16461631554365,2.56160706529101,1.6553756092201,0,0,0,0,0,0,0,0,0,1.9791078011203,2.19410023383795,1.70489900213078,0,0,0,4.52247597462138,3.65038042894141,2.38907729175628,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12264037773229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43691668066254,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0.0821154570532092,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0,0.306345576763462,0.327872630709804,0.471162288750703,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.453692771289717,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,1.17780280338292,0,16.1857209296974,11.7035599816122,0,0,0,0,0,38.9663983034412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0.0645889098360061,0.620747142958579,0,0,0,0,0.342233301085281,0,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,3.16461631554365,2.56160706529101,1.6553756092201,0,0,0,0,0,0,0,0,0,1.9791078011203,2.19410023383795,1.70489900213078,0,0,0,4.52247597462138,3.65038042894141,2.38907729175628,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12264037773229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43691668066254,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0.0821154570532092,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0,0.306345576763462,0.327872630709804,0.471162288750703,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.453692771289717,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,1.17780280338292,0,16.1857209296974,11.7035599816122,0,0,0,0,0,38.9663983034412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0.0645889098360061,0.620747142958579,0,0,0,0,0.342233301085281,0,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:240197666..240197678,+ | |short_description=p@chr2:240197666..240197678,+ | ||
}} | }} |
Latest revision as of 08:23, 29 July 2015
Short description: | p@chr2:240197666..240197678, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:240197666..240197678, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.94e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.94e-21 | 42 |
defensive cell | 1.23e-18 | 48 |
phagocyte | 1.23e-18 | 48 |
monopoietic cell | 1.05e-14 | 59 |
monocyte | 1.05e-14 | 59 |
monoblast | 1.05e-14 | 59 |
promonocyte | 1.05e-14 | 59 |
macrophage dendritic cell progenitor | 3.39e-14 | 61 |
myeloid lineage restricted progenitor cell | 4.65e-13 | 66 |
granulocyte monocyte progenitor cell | 7.50e-13 | 67 |
myeloid leukocyte | 6.73e-12 | 72 |
myeloid cell | 1.32e-07 | 108 |
common myeloid progenitor | 1.32e-07 | 108 |
nongranular leukocyte | 4.43e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 9.68e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 7.81e-08 | 7 |
bronchogenic carcinoma | 7.81e-08 | 7 |
signet ring cell adenocarcinoma | 4.98e-07 | 2 |