FFCP PHASE1:Hg19::chr2:27994811..27994897,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9553 | |EntrezGene=9553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14487 | |HGNC=14487 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000483992_5end | |association_with_transcript=0bp_to_ENST00000483992_5end | ||
|cluster_id=chr2:27994811..27994897,+ | |||
|description=CAGE_peak_2_at_MRPL33_5end | |description=CAGE_peak_2_at_MRPL33_5end | ||
|id=chr2:27994811..27994897,+ | |id=chr2:27994811..27994897,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.47e-13!57;UBERON:0005068!5.47e-13!57;UBERON:0006241!5.47e-13!57;UBERON:0007135!5.47e-13!57;UBERON:0002020!2.66e-12!34;UBERON:0003528!2.66e-12!34;UBERON:0001869!3.94e-12!32;UBERON:0002780!4.88e-12!41;UBERON:0001890!4.88e-12!41;UBERON:0006240!4.88e-12!41;UBERON:0001893!8.76e-12!34;UBERON:0003075!1.46e-11!86;UBERON:0007284!1.46e-11!86;UBERON:0002791!2.69e-11!33;UBERON:0003056!3.91e-11!61;UBERON:0003080!4.41e-11!42;UBERON:0001017!1.12e-10!82;UBERON:0002346!1.75e-10!90;UBERON:0000955!1.86e-10!69;UBERON:0006238!1.86e-10!69;UBERON:0000956!2.77e-10!25;UBERON:0000203!2.77e-10!25;UBERON:0002616!4.68e-10!59;UBERON:0000033!1.22e-09!123;UBERON:0005743!1.23e-09!86;UBERON:0000073!1.54e-09!94;UBERON:0001016!1.54e-09!94;UBERON:0002619!4.11e-09!22;UBERON:0001950!1.49e-08!20;UBERON:0000153!2.88e-08!129;UBERON:0007811!2.88e-08!129;UBERON:0004121!3.70e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.41e-12;32!UBERON:0001893;1.59e-12;34!UBERON:0003528;3.46e-12;34!UBERON:0002020;3.46e-12;34!UBERON:0002791;4.56e-12;32!UBERON:0000956;9.50e-12;25!UBERON:0000203;9.50e-12;25!UBERON:0002619;2.53e-10;22!UBERON:0002780;6.07e-10;41!UBERON:0001890;6.07e-10;41!UBERON:0001950;1.49e-09;20!UBERON:0000073;1.36e-08;53!UBERON:0002616;1.36e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.43e-15,56;UBERON:0005068,7.43e-15,56;UBERON:0006241,7.43e-15,56;UBERON:0007135,7.43e-15,56;UBERON:0000073,8.84e-14,53;UBERON:0002616,8.84e-14,53;UBERON:0003528,1.04e-13,34;UBERON:0002020,1.04e-13,34;UBERON:0003075,1.42e-13,82;UBERON:0007284,1.42e-13,82;UBERON:0001869,1.59e-13,32;UBERON:0002780,2.20e-13,41;UBERON:0001890,2.20e-13,41;UBERON:0003080,2.20e-13,41;UBERON:0006240,2.20e-13,41;UBERON:0001893,3.95e-13,34;UBERON:0002791,5.58e-13,32;UBERON:0003056,7.73e-13,61;UBERON:0002346,2.28e-12,86;UBERON:0000956,1.39e-11,25;UBERON:0000203,1.39e-11,25;UBERON:0010314,2.14e-11,132;UBERON:0001017,2.38e-11,81;UBERON:0001016,2.61e-11,89;UBERON:0000955,3.00e-11,68;UBERON:0006238,3.00e-11,68;UBERON:0010371,1.40e-10,104;UBERON:0002619,2.74e-10,22;UBERON:0001950,1.13e-09,20;UBERON:0004121,2.92e-07,171;UBERON:0000924,2.92e-07,171;UBERON:0006601,2.92e-07,171 | |||
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| ||
|short_description=p2@MRPL33 | |short_description=p2@MRPL33 | ||
}} | }} |
Latest revision as of 18:23, 16 September 2015
Short description: | p2@MRPL33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MRPL33_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000483992_5end |
EntrezGene: | MRPL33 |
HGNC: | 14487 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 7.43e-15 | 56 |
neural rod | 7.43e-15 | 56 |
future spinal cord | 7.43e-15 | 56 |
neural keel | 7.43e-15 | 56 |
regional part of nervous system | 8.84e-14 | 53 |
regional part of brain | 8.84e-14 | 53 |
brain grey matter | 1.04e-13 | 34 |
gray matter | 1.04e-13 | 34 |
neural plate | 1.42e-13 | 82 |
presumptive neural plate | 1.42e-13 | 82 |
cerebral hemisphere | 1.59e-13 | 32 |
regional part of forebrain | 2.20e-13 | 41 |
forebrain | 2.20e-13 | 41 |
anterior neural tube | 2.20e-13 | 41 |
future forebrain | 2.20e-13 | 41 |
telencephalon | 3.95e-13 | 34 |
regional part of telencephalon | 5.58e-13 | 32 |
pre-chordal neural plate | 7.73e-13 | 61 |
neurectoderm | 2.28e-12 | 86 |
cerebral cortex | 1.39e-11 | 25 |
pallium | 1.39e-11 | 25 |
structure with developmental contribution from neural crest | 2.14e-11 | 132 |
central nervous system | 2.38e-11 | 81 |
nervous system | 2.61e-11 | 89 |
brain | 3.00e-11 | 68 |
future brain | 3.00e-11 | 68 |
ecto-epithelium | 1.40e-10 | 104 |
regional part of cerebral cortex | 2.74e-10 | 22 |
neocortex | 1.13e-09 | 20 |
ectoderm-derived structure | 2.92e-07 | 171 |
ectoderm | 2.92e-07 | 171 |
presumptive ectoderm | 2.92e-07 | 171 |