FFCP PHASE1:Hg19::chr3:170076246..170076261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6498 | |EntrezGene=6498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10897 | |HGNC=10897 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000490989_5end | |association_with_transcript=-35bp_to_ENST00000490989_5end | ||
|cluster_id=chr3:170076246..170076261,+ | |||
|coexpression_cluster_id=C4304 | |||
|description=CAGE_peak_8_at_SKIL_5end | |description=CAGE_peak_8_at_SKIL_5end | ||
|id=chr3:170076246..170076261,+ | |id=chr3:170076246..170076261,+ | ||
|ontology_enrichment_celltype=CL:0002321!3.27e-08!248;CL:0000220!1.65e-07!246;CL:1000413!4.64e-07!9 | |ontology_enrichment_celltype=CL:0002321!3.27e-08!248;CL:0000220!1.65e-07!246;CL:1000413!4.64e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.02e-24;5!CL:0002321;2.37e-14;15!CL:0000540;1.19e-07;6!CL:0000404;1.19e-07;6!CL:0000064;2.63e-07;3!CL:0000067;2.63e-07;3!CL:0005012;2.63e-07;3!CL:0002304;2.63e-07;3!CL:0002166;4.76e-07;3!CL:0002580;4.76e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.87e-24,5;CL:0000540,1.60e-07,6;CL:0000031,1.60e-07,6;CL:0000404,1.60e-07,6;CL:0000064,2.56e-07,3;CL:0000067,2.56e-07,3;CL:0005012,2.56e-07,3;CL:0002304,2.56e-07,3;CL:0002580,4.30e-07,3;CL:0002166,5.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;1.19e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003915!4.64e-07!9;UBERON:0004700!4.64e-07!9;UBERON:0001917!4.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;2.63e-07;3!UBERON:0001775;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.56e-07,3;UBERON:0001775,2.56e-07,3 | |||
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|phase1_expression=0.726713517082227,0.428201047781966,1.12763523276777,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0,0,0.247532705920093,0,0,0.602694528023977,1.46062018077475,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0.619412741790207,0.28769239232215,0,0,0,0,0,0.376484679085209,0.545812300115692,0.674170453335254,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0.361439152384566,0,0,0,0,2.6469748805939,0.665188192387692,2.3715392137144,0.130979075497713,0,0,0,0,0,0.715471872916026,0,0.74291500265913,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0,0,0,0.367663080345869,2.43042584364528,0.625098097988558,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0,1.49091585508596,0,0.662045904066094,1.43418310374407,0,0,0,0.74000264525148,0.311211035399766,0.808264032418128,0.653847612453835,0.151357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.340296549480063,0.358779271377724,0,0,0,0.103052529238439,0,0.18611685633159,0.843881661206331,0.389748020644795,0.252433774244115,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0.272746120590835,0,5.73276418809098,4.77107165957347,3.71820617182459,2.48786532036889,1.7662459561294,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0.115930404975077,4.57893907519705,0,0,0.190254152234598,0,0,0,0,0.148631162288728,2.81201501960331,1.17587489739202,0.141775097242386,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.399891964728228,0,0,0,0.239624855491583,0,0,0.579125226670317,0.205476322550383,1.61154866915906,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,1.48864684691266,2.30192959932094,0.561320188866147,0.640695746278505,0.511707249066704,1.76939313257968,0,0.154209693802656,0,0,0,0,0,0.601519410909855,0,0,0.364182336013434,0.131124414959424,0,0.539107359730903,0,0,0.844413031143006,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0,0.275673144969061,0.107420244868274,0,0,0.534192213880424,0.330569830721956,0,0.255225424989168,0,0.929691098594572,1.5740617341532,1.3940745403212,0,0,0,0,0.858749320451947,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0.842516912477962,0,0,0,0,0.424216295861138,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0.43050537267123,0,0,1.60806380144872,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.811367035427949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0.941798755221676,0,0.853828638089378,0.277349346026277,0,0.293977192243133,0.174118413160805,0.17472666824203,0.171986032471617,0,0.0730893170861856,0,0,0.441280633457501,0,0.274083849293502,0.397429223405979,0,1.75996244461323,0,0.213452994739353,0,0.576361668616424,1.14536596165916,0,0,0.621262677827163,0,0.271808412147228,0,0.203996435272644,1.44475294950759,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0,0,0.13480708770837,0.0984274815147488,0,0,0,1.12527203925513,4.12618309791701,4.15440338029185,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0.903017728242729,1.02232813071253,0.226624183040251,0,0,0,0,0.171086837884329,2.11444506695002,0,0,0.414239055347196,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.276697269872462,0,0,0,0,0,0,0.447764408660622,0.934853239388898,0.554805861502613,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0.466311601748341,0.887130899937803,0.318593534327405,0,0,0.414706207840855,0.265841714557995,0,0.150257608997218,0,1.22061219961398,0.181848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| ||
|short_description=p8@SKIL | |short_description=p8@SKIL | ||
}} | }} |
Latest revision as of 16:03, 16 September 2015
Short description: | p8@SKIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SKIL_5end |
Coexpression cluster: | C4304_iPS_H9_Lens_HES3GFP_Ciliary_renal_Fibroblast |
Association with transcript: | -35bp_to_ENST00000490989_5end |
EntrezGene: | SKIL |
HGNC: | 10897 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.87e-24 | 5 |
neuron | 1.60e-07 | 6 |
neuroblast | 1.60e-07 | 6 |
electrically signaling cell | 1.60e-07 | 6 |
ciliated cell | 2.56e-07 | 3 |
ciliated epithelial cell | 2.56e-07 | 3 |
multi-ciliated epithelial cell | 2.56e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.56e-07 | 3 |
preadipocyte of the breast | 4.30e-07 | 3 |
epithelial cell of Malassez | 5.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.56e-07 | 3 |
ciliary body | 2.56e-07 | 3 |