FFCP PHASE1:Hg19::chr15:100106670..100106697,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:100106670..100106697,+
|short_description=p4@MEF2A
|description=CAGE_peak_4_at_MEF2A_5end
|association_with_transcript=0bp_to_ENST00000559903_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4205 | |EntrezGene=4205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6993 | |HGNC=6993 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000559903_5end | |||
|cluster_id=chr15:100106670..100106697,+ | |||
|description=CAGE_peak_4_at_MEF2A_5end | |||
|id=chr15:100106670..100106697,+ | |||
|ontology_enrichment_celltype=CL:0002009!9.90e-16!65;CL:0002194!5.52e-15!63;CL:0000576!5.52e-15!63;CL:0000040!5.52e-15!63;CL:0000559!5.52e-15!63;CL:0000557!6.17e-14!71;CL:0002057!7.94e-13!42;CL:0000839!1.21e-11!70;CL:0000766!1.23e-11!76;CL:0000860!2.42e-11!45;CL:0002087!4.94e-09!119;CL:0000738!7.14e-08!140;CL:0002031!7.59e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.16e-15;39!CL:0000234;1.16e-15;39!CL:0000860;3.25e-15;33!CL:0002057;3.25e-15;33!CL:0000576;1.47e-10;48!CL:0000766;1.77e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.26e-21,61;CL:0002194,4.15e-20,59;CL:0000576,4.15e-20,59;CL:0000040,4.15e-20,59;CL:0000559,4.15e-20,59;CL:0000557,2.88e-19,67;CL:0000473,2.14e-18,48;CL:0000234,2.14e-18,48;CL:0000839,9.51e-17,66;CL:0000766,1.76e-16,72;CL:0000860,4.34e-15,42;CL:0002057,4.34e-15,42;CL:0002087,1.20e-11,115;CL:0002031,1.21e-11,120;CL:0000738,3.81e-10,136;CL:0000763,2.80e-08,108;CL:0000049,2.80e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.67e-20!115;UBERON:0001474!4.27e-12!86;UBERON:0002371!2.72e-11!80;UBERON:0004765!3.65e-11!101;UBERON:0001434!3.65e-11!101;UBERON:0002405!1.26e-09!115;UBERON:0001049!2.15e-09!57;UBERON:0005068!2.15e-09!57;UBERON:0006241!2.15e-09!57;UBERON:0007135!2.15e-09!57;UBERON:0002390!1.82e-08!102;UBERON:0003061!1.82e-08!102;UBERON:0002193!3.26e-08!112;UBERON:0002616!1.02e-07!59;UBERON:0005743!1.70e-07!86;UBERON:0003080!2.27e-07!42;UBERON:0002204!2.32e-07!167;UBERON:0002780!4.79e-07!41;UBERON:0001890!4.79e-07!41;UBERON:0006240!4.79e-07!41;UBERON:0001017!5.08e-07!82;UBERON:0000955!5.24e-07!69;UBERON:0006238!5.24e-07!69;UBERON:0000073!7.10e-07!94;UBERON:0001016!7.10e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.06e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.29e-21,114;UBERON:0001474,2.39e-16,82;UBERON:0002371,2.28e-15,76;UBERON:0002405,7.85e-14,93;UBERON:0004765,5.00e-13,90;UBERON:0001434,3.55e-12,100;UBERON:0002193,1.37e-10,108;UBERON:0001049,1.54e-10,56;UBERON:0005068,1.54e-10,56;UBERON:0006241,1.54e-10,56;UBERON:0007135,1.54e-10,56;UBERON:0002390,2.34e-10,98;UBERON:0003061,2.34e-10,98;UBERON:0000073,3.96e-09,53;UBERON:0002616,3.96e-09,53;UBERON:0002780,4.82e-08,41;UBERON:0001890,4.82e-08,41;UBERON:0003080,4.82e-08,41;UBERON:0006240,4.82e-08,41;UBERON:0001017,1.06e-07,81;UBERON:0000955,1.54e-07,68;UBERON:0006238,1.54e-07,68;UBERON:0003528,2.04e-07,34;UBERON:0002020,2.04e-07,34;UBERON:0001893,2.05e-07,34;UBERON:0003075,2.06e-07,82;UBERON:0007284,2.06e-07,82;UBERON:0002204,4.92e-07,167;UBERON:0002346,7.87e-07,86;UBERON:0001869,9.09e-07,32;UBERON:0007100,9.12e-07,27 | |||
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| ||
|short_description=p4@MEF2A | |||
}} | }} |
Latest revision as of 21:35, 16 September 2015
Short description: | p4@MEF2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MEF2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000559903_5end |
EntrezGene: | MEF2A |
HGNC: | 6993 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 4.26e-21 | 61 |
monopoietic cell | 4.15e-20 | 59 |
monocyte | 4.15e-20 | 59 |
monoblast | 4.15e-20 | 59 |
promonocyte | 4.15e-20 | 59 |
granulocyte monocyte progenitor cell | 2.88e-19 | 67 |
defensive cell | 2.14e-18 | 48 |
phagocyte | 2.14e-18 | 48 |
myeloid lineage restricted progenitor cell | 9.51e-17 | 66 |
myeloid leukocyte | 1.76e-16 | 72 |
classical monocyte | 4.34e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.34e-15 | 42 |
nongranular leukocyte | 1.20e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.21e-11 | 120 |
leukocyte | 3.81e-10 | 136 |
myeloid cell | 2.80e-08 | 108 |
common myeloid progenitor | 2.80e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.29e-21 | 114 |
bone element | 2.39e-16 | 82 |
bone marrow | 2.28e-15 | 76 |
immune system | 7.85e-14 | 93 |
skeletal element | 5.00e-13 | 90 |
skeletal system | 3.55e-12 | 100 |
hemolymphoid system | 1.37e-10 | 108 |
neural tube | 1.54e-10 | 56 |
neural rod | 1.54e-10 | 56 |
future spinal cord | 1.54e-10 | 56 |
neural keel | 1.54e-10 | 56 |
hematopoietic system | 2.34e-10 | 98 |
blood island | 2.34e-10 | 98 |
regional part of nervous system | 3.96e-09 | 53 |
regional part of brain | 3.96e-09 | 53 |
regional part of forebrain | 4.82e-08 | 41 |
forebrain | 4.82e-08 | 41 |
anterior neural tube | 4.82e-08 | 41 |
future forebrain | 4.82e-08 | 41 |
central nervous system | 1.06e-07 | 81 |
brain | 1.54e-07 | 68 |
future brain | 1.54e-07 | 68 |
brain grey matter | 2.04e-07 | 34 |
gray matter | 2.04e-07 | 34 |
telencephalon | 2.05e-07 | 34 |
neural plate | 2.06e-07 | 82 |
presumptive neural plate | 2.06e-07 | 82 |
musculoskeletal system | 4.92e-07 | 167 |
neurectoderm | 7.87e-07 | 86 |
cerebral hemisphere | 9.09e-07 | 32 |
primary circulatory organ | 9.12e-07 | 27 |