FFCP PHASE1:Hg19::chr3:196366546..196366553,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375387 | |EntrezGene=375387 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24613 | |HGNC=24613 | ||
|TSSclassifier=strong | |||
|UniProt=Q86YC3 | |UniProt=Q86YC3 | ||
|association_with_transcript=-3bp_to_ENST00000328557_5end | |association_with_transcript=-3bp_to_ENST00000328557_5end | ||
|cluster_id=chr3:196366546..196366553,+ | |||
|description=CAGE_peak_4_at_LRRC33_5end | |description=CAGE_peak_4_at_LRRC33_5end | ||
|id=chr3:196366546..196366553,+ | |id=chr3:196366546..196366553,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.52e-41!172;CL:0000566!3.52e-41!172;CL:0000988!1.19e-40!182;CL:0002032!3.06e-37!165;CL:0000837!3.06e-37!165;CL:0000738!1.81e-22!140;CL:0000763!5.77e-22!112;CL:0000049!5.77e-22!112;CL:0002087!2.55e-21!119;CL:0002031!1.88e-20!124;CL:0000542!4.84e-14!53;CL:0000051!4.84e-14!53;CL:0000838!3.31e-13!52;CL:0000134!7.84e-10!358;CL:0002320!3.34e-09!365;CL:0000219!5.22e-09!390;CL:0000839!6.62e-09!70;CL:0000451!7.41e-08!10;CL:0000084!1.41e-07!25;CL:0000827!1.41e-07!25;CL:0002194!1.68e-07!63;CL:0000576!1.68e-07!63;CL:0000040!1.68e-07!63;CL:0000559!1.68e-07!63;CL:0000557!2.88e-07!71;CL:0002009!4.51e-07!65 | |ontology_enrichment_celltype=CL:0000037!3.52e-41!172;CL:0000566!3.52e-41!172;CL:0000988!1.19e-40!182;CL:0002032!3.06e-37!165;CL:0000837!3.06e-37!165;CL:0000738!1.81e-22!140;CL:0000763!5.77e-22!112;CL:0000049!5.77e-22!112;CL:0002087!2.55e-21!119;CL:0002031!1.88e-20!124;CL:0000542!4.84e-14!53;CL:0000051!4.84e-14!53;CL:0000838!3.31e-13!52;CL:0000134!7.84e-10!358;CL:0002320!3.34e-09!365;CL:0000219!5.22e-09!390;CL:0000839!6.62e-09!70;CL:0000451!7.41e-08!10;CL:0000084!1.41e-07!25;CL:0000827!1.41e-07!25;CL:0002194!1.68e-07!63;CL:0000576!1.68e-07!63;CL:0000040!1.68e-07!63;CL:0000559!1.68e-07!63;CL:0000557!2.88e-07!71;CL:0002009!4.51e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000990;1.78e-15;8!CL:0000451;1.25e-12;10!CL:0000235;5.25e-09;6!CL:0000840;5.25e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.24e-23,168;CL:0002032,1.87e-22,161;CL:0000837,1.87e-22,161;CL:0000988,9.42e-22,177;CL:0000763,7.59e-19,108;CL:0000049,7.59e-19,108;CL:0000990,1.42e-15,8;CL:0000451,1.04e-12,10;CL:0000840,5.05e-09,5;CL:0001029,5.05e-09,5;CL:0000235,6.31e-09,6;CL:0000134,5.20e-08,354;CL:0002320,9.64e-08,361;CL:0000738,2.29e-07,136;CL:0000219,8.48e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!7.56e-33!51;DOID:0060083!7.56e-33!51;DOID:1240!1.10e-32!39;DOID:8692!2.90e-25!31;DOID:1036!4.61e-09!8;DOID:0050686!7.32e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.69e-28;31!DOID:1240;5.72e-28;39!DOID:2531;1.30e-20;51!DOID:0060083;1.30e-20;51!DOID:1036;4.03e-12;8!DOID:630;5.94e-07;1!DOID:0050177;5.94e-07;1!DOID:0050427;5.94e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.12e-40,39;DOID:2531,1.19e-33,51;DOID:0060083,1.19e-33,51;DOID:8692,2.28e-29,31;DOID:1036,3.50e-12,8;DOID:0050686,2.75e-11,137;DOID:630,5.78e-07,1;DOID:0050177,5.78e-07,1;DOID:0050427,5.78e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-14!102;UBERON:0003061!2.19e-14!102;UBERON:0002193!5.66e-12!112;UBERON:0002384!1.00e-09!375;UBERON:0004177!2.61e-08!7;UBERON:0000178!4.34e-07!15;UBERON:0000179!4.34e-07!15;UBERON:0000463!4.34e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.19e-14!102;UBERON:0003061!2.19e-14!102;UBERON:0002193!5.66e-12!112;UBERON:0002384!1.00e-09!375;UBERON:0004177!2.61e-08!7;UBERON:0000178!4.34e-07!15;UBERON:0000179!4.34e-07!15;UBERON:0000463!4.34e-07!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.50e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.534893840235659,1.47781061009902,0.865818594450472,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0.633765858935825,0.212604299965044,0.419317291016752,0.44931452458598,0.300353785683013,0.32145117339416,0.855038231223746,0,0.365328307529268,0,0,0,0,0.800791974072025,0,0,0,0,0.587237189370939,0.764546456250458,0,0,1.05353633910031,0,0,0.205601498999509,0.334372990781356,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0.768547918354051,0.390178042679635,0,0.552700035571697,0,0.296573126324121,0,0,0.453237370790265,0.383220493601921,0,0,1.27426165729639,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,1.21890816109487,1.32957960518865,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.580969714347592,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,1.40402559083543,1.0404181360211,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.224170287987055,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,1.58625035258854,0.320472213382419,0,0.245040215981032,0.557409525377156,0,1.56512055366511,2.23196781820351,1.79621434289535,2.10655907145603,0.635020748171649,0,0.280797178113459,0,1.72347885350326,0,1.01575066680962,2.56940920165919,2.01799707191048,0,1.03051603426729,0.307240764308458,0.894704431569664,0.834245708559542,0.586164286206121,2.50565556505718,2.46174797895425,0.270455678475983,0.99921590399346,0,0,0.439524537815682,0,2.45175445410452,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.861593638227486,0,0,0,4.09257896181497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,1.72678282034527,0.332423363800313,0.451191321234361,0,0.335643173951685,0.37950746544837,2.06617552674492,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,2.38068310173083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19578356282027,1.96278473107013,0,0,0,0.19998739585493,0.533458648470704,0.172214979660816,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,1.27865567904938,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0.799529247399431,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,1.01988829741982,2.13773924212448,0.275684698604535,0.752122617877125,0,0,0,0,0,0.23806443146374,0.516711278688049,0.496597714366863,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 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| ||
|short_description=p4@LRRC33 | |short_description=p4@LRRC33 | ||
}} | }} |
Latest revision as of 15:50, 17 September 2015
Short description: | p4@LRRC33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC33_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000328557_5end |
EntrezGene: | LRRC33 |
HGNC: | 24613 |
UniProt: | Q86YC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.24e-23 | 168 |
hematopoietic oligopotent progenitor cell | 1.87e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-22 | 161 |
hematopoietic cell | 9.42e-22 | 177 |
myeloid cell | 7.59e-19 | 108 |
common myeloid progenitor | 7.59e-19 | 108 |
conventional dendritic cell | 1.42e-15 | 8 |
dendritic cell | 1.04e-12 | 10 |
immature conventional dendritic cell | 5.05e-09 | 5 |
common dendritic progenitor | 5.05e-09 | 5 |
macrophage | 6.31e-09 | 6 |
mesenchymal cell | 5.20e-08 | 354 |
connective tissue cell | 9.64e-08 | 361 |
leukocyte | 2.29e-07 | 136 |
motile cell | 8.48e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.50e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.12e-40 | 39 |
hematologic cancer | 1.19e-33 | 51 |
immune system cancer | 1.19e-33 | 51 |
myeloid leukemia | 2.28e-29 | 31 |
chronic leukemia | 3.50e-12 | 8 |
organ system cancer | 2.75e-11 | 137 |
genetic disease | 5.78e-07 | 1 |
monogenic disease | 5.78e-07 | 1 |
xeroderma pigmentosum | 5.78e-07 | 1 |