FFCP PHASE1:Hg19::chr3:49059164..49059185,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25915 | |EntrezGene=25915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29918 | |HGNC=29918 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BU61,Q9Y3Z0,A4FU71 | |UniProt=Q9BU61,Q9Y3Z0,A4FU71 | ||
|association_with_transcript=90bp_to_NM_199069,NM_199070,uc003cvq.2,uc003cvr.2,uc003cvs.2_5end | |association_with_transcript=90bp_to_NM_199069,NM_199070,uc003cvq.2,uc003cvr.2,uc003cvs.2_5end | ||
|cluster_id=chr3:49059164..49059185,+ | |||
|description=CAGE_peak_3_at_NDUFAF3_5end | |description=CAGE_peak_3_at_NDUFAF3_5end | ||
|id=chr3:49059164..49059185,+ | |id=chr3:49059164..49059185,+ | ||
|ontology_enrichment_celltype=CL:0000548!9.64e-27!679;CL:0000004!9.64e-27!679;CL:0000255!9.64e-27!679;CL:0000012!2.53e-26!682;CL:0000144!7.79e-19!625;CL:0000220!1.71e-18!246;CL:0002321!5.62e-18!248;CL:0000222!1.19e-17!119;CL:0002371!1.09e-16!591;CL:0000055!6.39e-16!180;CL:0000183!4.24e-14!59;CL:0000192!6.62e-14!42;CL:0000514!6.62e-14!42;CL:0000680!8.32e-14!57;CL:0000056!8.32e-14!57;CL:0000355!8.32e-14!57;CL:0000003!1.91e-13!722;CL:0000187!3.37e-13!54;CL:0000066!4.94e-13!254;CL:0000393!5.00e-11!60;CL:0000211!5.00e-11!60;CL:0000359!9.73e-11!32;CL:0000063!3.62e-09!578 | |ontology_enrichment_celltype=CL:0000548!9.64e-27!679;CL:0000004!9.64e-27!679;CL:0000255!9.64e-27!679;CL:0000012!2.53e-26!682;CL:0000144!7.79e-19!625;CL:0000220!1.71e-18!246;CL:0002321!5.62e-18!248;CL:0000222!1.19e-17!119;CL:0002371!1.09e-16!591;CL:0000055!6.39e-16!180;CL:0000183!4.24e-14!59;CL:0000192!6.62e-14!42;CL:0000514!6.62e-14!42;CL:0000680!8.32e-14!57;CL:0000056!8.32e-14!57;CL:0000355!8.32e-14!57;CL:0000003!1.91e-13!722;CL:0000187!3.37e-13!54;CL:0000066!4.94e-13!254;CL:0000393!5.00e-11!60;CL:0000211!5.00e-11!60;CL:0000359!9.73e-11!32;CL:0000063!3.62e-09!578 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.12e-10;32!CL:0000192;5.19e-10;43!CL:1000449;2.25e-07;15!CL:1000507;3.11e-07;10!CL:1000494;3.11e-07;10!CL:0000187;4.37e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.63e-18,121;CL:0002321,1.38e-15,250;CL:0000192,2.19e-14,43;CL:0000514,2.19e-14,43;CL:0000680,3.82e-13,58;CL:0000056,3.82e-13,58;CL:0000355,3.82e-13,58;CL:0000187,1.78e-12,55;CL:0000359,1.07e-11,32;CL:0000066,1.05e-10,253;CL:0000393,6.94e-10,61;CL:0000211,6.94e-10,61;CL:1000449,2.23e-07,15;CL:1000507,3.68e-07,10;CL:1000494,3.68e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;5.19e-10;43!CL:0000355;4.52e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.91e-13!143;UBERON:0002100!2.33e-13!216;UBERON:0002049!1.07e-12!79;UBERON:0007798!1.07e-12!79;UBERON:0003914!1.63e-12!118;UBERON:0000486!1.81e-12!82;UBERON:0000914!1.82e-11!83;UBERON:0002329!1.82e-11!83;UBERON:0003077!1.82e-11!83;UBERON:0003059!1.82e-11!83;UBERON:0007282!1.82e-11!83;UBERON:0009618!1.82e-11!83;UBERON:0007285!1.82e-11!83;UBERON:0003104!4.22e-11!238;UBERON:0009142!4.22e-11!238;UBERON:0004290!4.25e-11!70;UBERON:0000490!5.20e-11!138;UBERON:0001134!7.74e-11!61;UBERON:0002036!7.74e-11!61;UBERON:0003082!7.74e-11!61;UBERON:0000055!5.31e-10!69;UBERON:0002385!8.18e-10!63;UBERON:0001015!8.18e-10!63;UBERON:0000383!8.18e-10!63;UBERON:0001637!8.20e-10!42;UBERON:0003509!8.20e-10!42;UBERON:0004572!8.20e-10!42;UBERON:0004872!1.36e-09!84;UBERON:0001981!2.60e-09!60;UBERON:0007500!2.60e-09!60;UBERON:0004537!2.60e-09!60;UBERON:0006965!2.60e-09!60;UBERON:0001009!1.85e-07!113;UBERON:0004535!2.07e-07!110;UBERON:0004573!3.80e-07!33;UBERON:0004571!3.80e-07!33;UBERON:0006554!8.79e-07!44 | |ontology_enrichment_uberon=UBERON:0005256!1.91e-13!143;UBERON:0002100!2.33e-13!216;UBERON:0002049!1.07e-12!79;UBERON:0007798!1.07e-12!79;UBERON:0003914!1.63e-12!118;UBERON:0000486!1.81e-12!82;UBERON:0000914!1.82e-11!83;UBERON:0002329!1.82e-11!83;UBERON:0003077!1.82e-11!83;UBERON:0003059!1.82e-11!83;UBERON:0007282!1.82e-11!83;UBERON:0009618!1.82e-11!83;UBERON:0007285!1.82e-11!83;UBERON:0003104!4.22e-11!238;UBERON:0009142!4.22e-11!238;UBERON:0004290!4.25e-11!70;UBERON:0000490!5.20e-11!138;UBERON:0001134!7.74e-11!61;UBERON:0002036!7.74e-11!61;UBERON:0003082!7.74e-11!61;UBERON:0000055!5.31e-10!69;UBERON:0002385!8.18e-10!63;UBERON:0001015!8.18e-10!63;UBERON:0000383!8.18e-10!63;UBERON:0001637!8.20e-10!42;UBERON:0003509!8.20e-10!42;UBERON:0004572!8.20e-10!42;UBERON:0004872!1.36e-09!84;UBERON:0001981!2.60e-09!60;UBERON:0007500!2.60e-09!60;UBERON:0004537!2.60e-09!60;UBERON:0006965!2.60e-09!60;UBERON:0001009!1.85e-07!113;UBERON:0004535!2.07e-07!110;UBERON:0004573!3.80e-07!33;UBERON:0004571!3.80e-07!33;UBERON:0006554!8.79e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.25e-07;15!UBERON:0004819;2.25e-07;15!UBERON:0001285;2.25e-07;15!UBERON:0007684;2.25e-07;15!UBERON:0004211;3.11e-07;10!UBERON:0009773;3.11e-07;10!UBERON:0001231;3.11e-07;10!UBERON:0004810;3.11e-07;10!UBERON:0001637;4.22e-07;42!UBERON:0003509;4.22e-07;42!UBERON:0004572;4.22e-07;42!UBERON:0002113;4.25e-07;24!UBERON:0011143;4.25e-07;24!UBERON:0003914;6.19e-07;74!UBERON:0004573;9.73e-07;33!UBERON:0004571;9.73e-07;33 | |||
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| ||
|short_description=p3@NDUFAF3 | |short_description=p3@NDUFAF3 | ||
}} | }} |
Latest revision as of 15:39, 18 September 2015
Short description: | p3@NDUFAF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NDUFAF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 90bp_to_NM_199069, NM_199070, uc003cvq.2, uc003cvr.2, uc003cvs.2_5end |
EntrezGene: | NDUFAF3 |
HGNC: | 29918 |
UniProt: | Q9BU61Q9Y3Z0A4FU71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.63e-18 | 121 |
embryonic cell | 1.38e-15 | 250 |
smooth muscle cell | 2.19e-14 | 43 |
smooth muscle myoblast | 2.19e-14 | 43 |
muscle precursor cell | 3.82e-13 | 58 |
myoblast | 3.82e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.82e-13 | 58 |
muscle cell | 1.78e-12 | 55 |
vascular associated smooth muscle cell | 1.07e-11 | 32 |
epithelial cell | 1.05e-10 | 253 |
electrically responsive cell | 6.94e-10 | 61 |
electrically active cell | 6.94e-10 | 61 |
epithelial cell of nephron | 2.23e-07 | 15 |
kidney tubule cell | 3.68e-07 | 10 |
nephron tubule epithelial cell | 3.68e-07 | 10 |