FFCP PHASE1:Hg19::chr3:49059786..49059806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25915 | |EntrezGene=25915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29918 | |HGNC=29918 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=240bp_to_ENST00000496152_5end | |association_with_transcript=240bp_to_ENST00000496152_5end | ||
|cluster_id=chr3:49059786..49059806,+ | |||
|description=CAGE_peak_4_at_NDUFAF3_5end | |description=CAGE_peak_4_at_NDUFAF3_5end | ||
|id=chr3:49059786..49059806,+ | |id=chr3:49059786..49059806,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.33e-07,43;CL:0000514,7.33e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.01e-09,78;UBERON:0003077,5.04e-07,72;UBERON:0007285,5.04e-07,72;UBERON:0005256,7.86e-07,122;UBERON:0007524,8.05e-07,73;UBERON:0004872,9.10e-07,83;UBERON:0001134,9.50e-07,62;UBERON:0002036,9.50e-07,62;UBERON:0003082,9.50e-07,62 | |||
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| ||
|short_description=p4@NDUFAF3 | |short_description=p4@NDUFAF3 | ||
}} | }} |
Latest revision as of 15:42, 18 September 2015
Short description: | p4@NDUFAF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NDUFAF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 240bp_to_ENST00000496152_5end |
EntrezGene: | NDUFAF3 |
HGNC: | 29918 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.33e-07 | 43 |
smooth muscle myoblast | 7.33e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 8.01e-09 | 78 |
paraxial mesoderm | 5.04e-07 | 72 |
presumptive paraxial mesoderm | 5.04e-07 | 72 |
trunk mesenchyme | 7.86e-07 | 122 |
dense mesenchyme tissue | 8.05e-07 | 73 |
splanchnic layer of lateral plate mesoderm | 9.10e-07 | 83 |
skeletal muscle tissue | 9.50e-07 | 62 |
striated muscle tissue | 9.50e-07 | 62 |
myotome | 9.50e-07 | 62 |