FFCP PHASE1:Hg19::chr3:5022174..5022207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8553 | |EntrezGene=8553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1046 | |HGNC=1046 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-305bp_to_AK309173_5end | |association_with_transcript=-305bp_to_AK309173_5end | ||
|cluster_id=chr3:5022174..5022207,+ | |||
|description=CAGE_peak_8_at_BHLHE40_5end | |description=CAGE_peak_8_at_BHLHE40_5end | ||
|id=chr3:5022174..5022207,+ | |id=chr3:5022174..5022207,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.38e-13!42;CL:0000860!1.43e-12!45;CL:0000766!1.19e-11!76;CL:0000557!3.56e-11!71;CL:0000839!7.90e-10!70;CL:0002009!4.25e-09!65;CL:0000738!1.81e-08!140;CL:0002194!2.98e-08!63;CL:0000576!2.98e-08!63;CL:0000040!2.98e-08!63;CL:0000559!2.98e-08!63;CL:0000763!6.72e-07!112;CL:0000049!6.72e-07!112 | |ontology_enrichment_celltype=CL:0002057!3.38e-13!42;CL:0000860!1.43e-12!45;CL:0000766!1.19e-11!76;CL:0000557!3.56e-11!71;CL:0000839!7.90e-10!70;CL:0002009!4.25e-09!65;CL:0000738!1.81e-08!140;CL:0002194!2.98e-08!63;CL:0000576!2.98e-08!63;CL:0000040!2.98e-08!63;CL:0000559!2.98e-08!63;CL:0000763!6.72e-07!112;CL:0000049!6.72e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.33e-10;5!CL:0000766;2.91e-09;69!CL:0000860;1.17e-07;33!CL:0002057;1.17e-07;33!CL:0002393;3.28e-07;6!CL:0002397;3.28e-07;6!CL:0000163;5.08e-07;9!CL:0000473;7.17e-07;39!CL:0000234;7.17e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.01e-16,72;CL:0000738,1.05e-15,136;CL:0000557,1.10e-14,67;CL:0000839,1.18e-12,66;CL:0000860,9.23e-12,42;CL:0002057,9.23e-12,42;CL:0000473,1.35e-11,48;CL:0000234,1.35e-11,48;CL:0002031,3.10e-11,120;CL:0000763,6.82e-11,108;CL:0000049,6.82e-11,108;CL:0000037,1.10e-10,168;CL:0002009,2.44e-10,61;CL:0000097,4.08e-10,5;CL:0002028,4.08e-10,5;CL:0000988,4.69e-10,177;CL:0002032,9.62e-10,161;CL:0000837,9.62e-10,161;CL:0002194,7.59e-09,59;CL:0000576,7.59e-09,59;CL:0000040,7.59e-09,59;CL:0000559,7.59e-09,59;CL:0002087,1.64e-08,115;CL:0000163,3.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.80e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.71e-12!115;UBERON:0002371!9.94e-10!80;UBERON:0002390!2.45e-08!102;UBERON:0003061!2.45e-08!102;UBERON:0001474!3.16e-08!86;UBERON:0002193!8.22e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!2.71e-12!115;UBERON:0002371!9.94e-10!80;UBERON:0002390!2.45e-08!102;UBERON:0003061!2.45e-08!102;UBERON:0001474!3.16e-08!86;UBERON:0002193!8.22e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.83e-14,76;UBERON:0001474,2.03e-12,82;UBERON:0002390,4.22e-12,98;UBERON:0003061,4.22e-12,98;UBERON:0004765,2.99e-11,90;UBERON:0002193,9.39e-11,108;UBERON:0002405,1.28e-10,93;UBERON:0001434,3.23e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0.436882744260345,0.791300934685361,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.687720651731561,0.985207073399349,0.865818594450472,3.93364276848904,1.91914699048606,3.09632246632152,0,0.30120591877825,0.369754010166788,0,0,0,5.53995408531877,4.21143339687298,4.12320654360118,0,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0.697287110717054,0.822335776043652,0.619412741790207,1.1507695692886,1.0246428261164,1.89185783910868,2.06847408441971,3.22742341791913,2.70852973188684,0.941211697713023,0.818718450173537,0.898893937780338,3.06083892370903,2.56743221660875,3.19668562899521,0.989553900560148,0.797854630486527,0.852449501065388,1.45104619314292,0,1.24564449799115,1.7587406567972,2.60741459210101,1.95469960234605,0,2.20966581592539,2.53169909952708,1.05627643155971,1.27562579979026,0.628975936525128,0.44931452458598,0.300353785683013,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0.764546456250458,0,3.36305137788922,0,0.196709770113833,1.57204305099666,0.822405995998037,0.668745981562712,0,0,0,0.779873198196215,0.294605907474837,0.221533894583621,0,0.25618263945135,0.130059347559878,0.493313713811028,0.276350017785848,1.15921234294021,0.14828656316206,0,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,2.21767417547206,2.13952156626806,2.31719046212478,0,0.670700859703636,0.12786256184353,0.361439152384566,1.00267582127178,0.144846518960824,3.1811437882044,3.40644409211845,0.567208902984407,0.443458794925128,0.175669571386252,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0.71153252537342,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,1.53316637465883,0,0.366403487860815,2.63560834872127,0,0.436094052142534,0.496971951695318,0,0.132409180813219,0.573673241497627,0,0,1.06748995729705,0.74000264525148,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0.710019185033229,0,0,0.773043412653187,1.63647672354501,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0,0.110293972732394,0.435758888184812,0.71181185733329,0.943819157121151,0.196221465125346,0.38474715694639,0,0,0,0,0,1.96565443335525,3.54473944008842,0,0,1.02940686179115,0.878002283269004,0,0.502644862058154,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,1.00789276919316,0.567100388969546,0,0,0.766765358330422,3.94130590316755,5.01876073875388,7.67114027500857,5.18831832301061,6.81709140502452,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0.710783897485092,0,0.301439377059586,0,0.399891964728228,1.2162378064119,1.00451418286425,0,0,0,0,0.144781306667579,0.410952645100767,0,0,2.75843064282698,4.52817907204986,3.08023287071396,0,0,0,0,0,0,0,1.24324654030811,0.12269149171914,0,0,0,0,0.157702415033935,0.234282829985426,0.601892199455438,0,1.03473071292505,0,0,0,0.195801157462741,0,1.24060815673732,1.50999940573032,1.70764092485511,0,0,0.30239029332968,0,0.61384789315225,0.280660094433074,0,0,0,0,0.462629081407967,0.710246901252508,0.492762936082855,0,0.116210378459959,0,0.601519410909855,0.368323955743585,0,0,0.131124414959424,0.451199612907412,0.539107359730903,0,0,1.05551628892876,0,0.510281115829547,0,0,0,0,0.764628819135115,0,0.447749509444357,0,0,0.256450125116389,0,0.976135183992909,1.33953315142039,0,0.165018999841176,0.574265537996172,1.30012049207304,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.0890320356467374,1.32227932288782,1.15314040419064,1.78657797492418,0.50578890427775,0,1.25924938732256,0,0.924100740528266,0.532306030317022,0,0.74129687641568,0.286249773483982,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,1.14729081763241,0,0.35667105148125,0,0.844430541190656,0,0,0,0.288666338176536,1.34060455107157,0,0.188287601553558,1.72202149068492,0,1.33029046061003,1.1486170010348,0.507447609232169,0,0,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,3.84991942105343,0,0,0,0,0,0.399158742865633,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,1.17206543417515,0,1.89453753271713,0,0.23874448473769,0,0.307160702099232,1.9882952955326,0.140669416410513,0.111308705022906,0.329607748453519,0,1.19548792950642,1.65770349318689,0,0.409074730008619,0.369254416383208,0,0.179736702294654,0.358042349351218,0,0.98643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| ||
|short_description=p8@BHLHE40 | |short_description=p8@BHLHE40 | ||
}} | }} |
Latest revision as of 18:32, 18 September 2015
Short description: | p8@BHLHE40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BHLHE40_5end |
Coexpression cluster: | NA |
Association with transcript: | -305bp_to_AK309173_5end |
EntrezGene: | BHLHE40 |
HGNC: | 1046 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.01e-16 | 72 |
leukocyte | 1.05e-15 | 136 |
granulocyte monocyte progenitor cell | 1.10e-14 | 67 |
myeloid lineage restricted progenitor cell | 1.18e-12 | 66 |
classical monocyte | 9.23e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.23e-12 | 42 |
defensive cell | 1.35e-11 | 48 |
phagocyte | 1.35e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 3.10e-11 | 120 |
myeloid cell | 6.82e-11 | 108 |
common myeloid progenitor | 6.82e-11 | 108 |
hematopoietic stem cell | 1.10e-10 | 168 |
macrophage dendritic cell progenitor | 2.44e-10 | 61 |
mast cell | 4.08e-10 | 5 |
basophil mast progenitor cell | 4.08e-10 | 5 |
hematopoietic cell | 4.69e-10 | 177 |
hematopoietic oligopotent progenitor cell | 9.62e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.62e-10 | 161 |
monopoietic cell | 7.59e-09 | 59 |
monocyte | 7.59e-09 | 59 |
monoblast | 7.59e-09 | 59 |
promonocyte | 7.59e-09 | 59 |
nongranular leukocyte | 1.64e-08 | 115 |
endocrine cell | 3.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.83e-14 | 76 |
bone element | 2.03e-12 | 82 |
hematopoietic system | 4.22e-12 | 98 |
blood island | 4.22e-12 | 98 |
skeletal element | 2.99e-11 | 90 |
hemolymphoid system | 9.39e-11 | 108 |
immune system | 1.28e-10 | 93 |
skeletal system | 3.23e-09 | 100 |