FFCP PHASE1:Hg19::chr3:53079983..53080025,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51460 | |EntrezGene=51460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20255 | |HGNC=20255 | ||
|TSSclassifier=strong | |||
|UniProt=C9IY64 | |UniProt=C9IY64 | ||
|association_with_transcript=42bp_to_ENST00000482396_5end | |association_with_transcript=42bp_to_ENST00000482396_5end | ||
|cluster_id=chr3:53079983..53080025,- | |||
|description=CAGE_peak_2_at_SFMBT1_5end | |description=CAGE_peak_2_at_SFMBT1_5end | ||
|id=chr3:53079983..53080025,- | |id=chr3:53079983..53080025,- | ||
|ontology_enrichment_celltype=CL:0000838!8.71e-09!52;CL:0000542!1.07e-08!53;CL:0000051!1.07e-08!53;CL:0000084!5.55e-07!25;CL:0000827!5.55e-07!25 | |ontology_enrichment_celltype=CL:0000838!8.71e-09!52;CL:0000542!1.07e-08!53;CL:0000051!1.07e-08!53;CL:0000084!5.55e-07!25;CL:0000827!5.55e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.03e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.67e-09,52;CL:0000542,3.32e-09,53;CL:0000051,3.32e-09,53;CL:0000084,3.30e-07,25;CL:0000827,3.30e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-23!115;UBERON:0001049!1.19e-11!57;UBERON:0005068!1.19e-11!57;UBERON:0006241!1.19e-11!57;UBERON:0007135!1.19e-11!57;UBERON:0003080!4.59e-11!42;UBERON:0002780!1.54e-10!41;UBERON:0001890!1.54e-10!41;UBERON:0006240!1.54e-10!41;UBERON:0001017!2.83e-09!82;UBERON:0000955!5.05e-09!69;UBERON:0006238!5.05e-09!69;UBERON:0002020!1.29e-08!34;UBERON:0003528!1.29e-08!34;UBERON:0001893!1.54e-08!34;UBERON:0005743!2.19e-08!86;UBERON:0002791!2.35e-08!33;UBERON:0002616!2.66e-08!59;UBERON:0001869!3.70e-08!32;UBERON:0000073!1.89e-07!94;UBERON:0001016!1.89e-07!94;UBERON:0000956!2.27e-07!25;UBERON:0000203!2.27e-07!25;UBERON:0002619!2.46e-07!22;UBERON:0003075!3.26e-07!86;UBERON:0007284!3.26e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.81e-23!115;UBERON:0001049!1.19e-11!57;UBERON:0005068!1.19e-11!57;UBERON:0006241!1.19e-11!57;UBERON:0007135!1.19e-11!57;UBERON:0003080!4.59e-11!42;UBERON:0002780!1.54e-10!41;UBERON:0001890!1.54e-10!41;UBERON:0006240!1.54e-10!41;UBERON:0001017!2.83e-09!82;UBERON:0000955!5.05e-09!69;UBERON:0006238!5.05e-09!69;UBERON:0002020!1.29e-08!34;UBERON:0003528!1.29e-08!34;UBERON:0001893!1.54e-08!34;UBERON:0005743!2.19e-08!86;UBERON:0002791!2.35e-08!33;UBERON:0002616!2.66e-08!59;UBERON:0001869!3.70e-08!32;UBERON:0000073!1.89e-07!94;UBERON:0001016!1.89e-07!94;UBERON:0000956!2.27e-07!25;UBERON:0000203!2.27e-07!25;UBERON:0002619!2.46e-07!22;UBERON:0003075!3.26e-07!86;UBERON:0007284!3.26e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.79e-08;41!UBERON:0001890;4.79e-08;41!UBERON:0002791;4.82e-07;32!UBERON:0000956;5.45e-07;25!UBERON:0000203;5.45e-07;25!UBERON:0001869;5.89e-07;32!UBERON:0002619;9.22e-07;22!UBERON:0003528;9.35e-07;34!UBERON:0002020;9.35e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.19e-24,114;UBERON:0001049,6.72e-11,56;UBERON:0005068,6.72e-11,56;UBERON:0006241,6.72e-11,56;UBERON:0007135,6.72e-11,56;UBERON:0002780,1.23e-10,41;UBERON:0001890,1.23e-10,41;UBERON:0003080,1.23e-10,41;UBERON:0006240,1.23e-10,41;UBERON:0000073,5.30e-10,53;UBERON:0002616,5.30e-10,53;UBERON:0011216,5.65e-09,223;UBERON:0003528,1.21e-08,34;UBERON:0002020,1.21e-08,34;UBERON:0001017,1.27e-08,81;UBERON:0001893,1.45e-08,34;UBERON:0000955,2.45e-08,68;UBERON:0006238,2.45e-08,68;UBERON:0002791,3.04e-08,32;UBERON:0001869,3.61e-08,32;UBERON:0001016,1.53e-07,89;UBERON:0000956,2.47e-07,25;UBERON:0000203,2.47e-07,25;UBERON:0002619,2.79e-07,22 | |||
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| ||
|short_description=p2@SFMBT1 | |short_description=p2@SFMBT1 | ||
}} | }} |
Latest revision as of 01:23, 19 September 2015
Short description: | p2@SFMBT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFMBT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000482396_5end |
EntrezGene: | SFMBT1 |
HGNC: | 20255 |
UniProt: | C9IY64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.67e-09 | 52 |
lymphocyte | 3.32e-09 | 53 |
common lymphoid progenitor | 3.32e-09 | 53 |
T cell | 3.30e-07 | 25 |
pro-T cell | 3.30e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.19e-24 | 114 |
neural tube | 6.72e-11 | 56 |
neural rod | 6.72e-11 | 56 |
future spinal cord | 6.72e-11 | 56 |
neural keel | 6.72e-11 | 56 |
regional part of forebrain | 1.23e-10 | 41 |
forebrain | 1.23e-10 | 41 |
anterior neural tube | 1.23e-10 | 41 |
future forebrain | 1.23e-10 | 41 |
regional part of nervous system | 5.30e-10 | 53 |
regional part of brain | 5.30e-10 | 53 |
organ system subdivision | 5.65e-09 | 223 |
brain grey matter | 1.21e-08 | 34 |
gray matter | 1.21e-08 | 34 |
central nervous system | 1.27e-08 | 81 |
telencephalon | 1.45e-08 | 34 |
brain | 2.45e-08 | 68 |
future brain | 2.45e-08 | 68 |
regional part of telencephalon | 3.04e-08 | 32 |
cerebral hemisphere | 3.61e-08 | 32 |
nervous system | 1.53e-07 | 89 |
cerebral cortex | 2.47e-07 | 25 |
pallium | 2.47e-07 | 25 |
regional part of cerebral cortex | 2.79e-07 | 22 |