FFCP PHASE1:Hg19::chr4:42399463..42399531,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152573 | |EntrezGene=152573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25159 | |HGNC=25159 | ||
|TSSclassifier=strong | |||
|UniProt=A0PJX4 | |UniProt=A0PJX4 | ||
|association_with_transcript=-324bp_to_ENST00000319234,NM_001080505,uc003gwp.2_5end | |association_with_transcript=-324bp_to_ENST00000319234,NM_001080505,uc003gwp.2_5end | ||
|cluster_id=chr4:42399463..42399531,+ | |||
|description=CAGE_peak_1_at_SHISA3_5end | |description=CAGE_peak_1_at_SHISA3_5end | ||
|id=chr4:42399463..42399531,+ | |id=chr4:42399463..42399531,+ | ||
|ontology_enrichment_celltype=CL:0000222!4.40e-17!119;CL:0000183!4.80e-10!59;CL:0000187!9.53e-10!54;CL:0000393!1.08e-09!60;CL:0000211!1.08e-09!60;CL:0000680!1.69e-09!57;CL:0000056!1.69e-09!57;CL:0000355!1.69e-09!57;CL:0002078!3.57e-08!44;CL:0000192!7.07e-08!42;CL:0000514!7.07e-08!42;CL:0000115!1.04e-07!35;CL:0000213!1.14e-07!57;CL:0000215!1.14e-07!57;CL:0002139!3.19e-07!24;CL:0000055!4.89e-07!180;CL:1000413!5.80e-07!9 | |ontology_enrichment_celltype=CL:0000222!4.40e-17!119;CL:0000183!4.80e-10!59;CL:0000187!9.53e-10!54;CL:0000393!1.08e-09!60;CL:0000211!1.08e-09!60;CL:0000680!1.69e-09!57;CL:0000056!1.69e-09!57;CL:0000355!1.69e-09!57;CL:0002078!3.57e-08!44;CL:0000192!7.07e-08!42;CL:0000514!7.07e-08!42;CL:0000115!1.04e-07!35;CL:0000213!1.14e-07!57;CL:0000215!1.14e-07!57;CL:0002139!3.19e-07!24;CL:0000055!4.89e-07!180;CL:1000413!5.80e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.17e-10;36!CL:0002139;1.15e-09;24!CL:1000413;3.97e-09;9!CL:0000071;3.71e-08;18!CL:0002078;7.38e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.15e-15,121;CL:0000115,7.38e-11,36;CL:0002078,1.47e-10,45;CL:0002139,8.56e-10,24;CL:1000413,3.74e-09,9;CL:0000213,1.56e-08,58;CL:0000215,1.56e-08,58;CL:0000071,2.95e-08,18;CL:0002546,2.95e-08,18;CL:0000393,1.12e-07,61;CL:0000211,1.12e-07,61;CL:0000187,1.53e-07,55;CL:0000680,2.80e-07,58;CL:0000056,2.80e-07,58;CL:0000355,2.80e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;3.71e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.27e-23!241;UBERON:0000025!3.88e-22!194;UBERON:0003914!2.54e-21!118;UBERON:0000477!1.73e-20!286;UBERON:0004872!2.58e-19!84;UBERON:0000055!1.68e-18!69;UBERON:0001009!3.13e-18!113;UBERON:0002049!5.84e-17!79;UBERON:0007798!5.84e-17!79;UBERON:0004535!9.50e-17!110;UBERON:0000483!1.42e-15!309;UBERON:0000119!1.83e-15!312;UBERON:0001981!2.68e-15!60;UBERON:0007500!2.68e-15!60;UBERON:0004537!2.68e-15!60;UBERON:0006965!2.68e-15!60;UBERON:0003103!6.77e-15!69;UBERON:0007023!1.15e-14!115;UBERON:0001637!3.26e-12!42;UBERON:0003509!3.26e-12!42;UBERON:0004572!3.26e-12!42;UBERON:0007100!6.52e-12!27;UBERON:0000481!3.37e-11!347;UBERON:0002385!4.79e-11!63;UBERON:0001015!4.79e-11!63;UBERON:0000383!4.79e-11!63;UBERON:0004573!2.02e-10!33;UBERON:0004571!2.02e-10!33;UBERON:0005256!2.64e-10!143;UBERON:0000490!3.69e-10!138;UBERON:0000948!3.84e-10!24;UBERON:0005498!3.84e-10!24;UBERON:0004140!3.84e-10!24;UBERON:0009881!3.84e-10!24;UBERON:0004141!3.84e-10!24;UBERON:0003084!3.84e-10!24;UBERON:0007005!3.84e-10!24;UBERON:0004139!3.84e-10!24;UBERON:0004291!3.84e-10!24;UBERON:0001134!4.20e-10!61;UBERON:0002036!4.20e-10!61;UBERON:0003082!4.20e-10!61;UBERON:0004290!1.84e-08!70;UBERON:0000468!3.92e-08!659;UBERON:0002100!6.43e-08!216;UBERON:0004876!1.40e-07!20;UBERON:0003915!5.80e-07!9;UBERON:0004700!5.80e-07!9;UBERON:0001917!5.80e-07!9;UBERON:0000922!6.73e-07!612;UBERON:0000914!6.79e-07!83;UBERON:0002329!6.79e-07!83;UBERON:0003077!6.79e-07!83;UBERON:0003059!6.79e-07!83;UBERON:0007282!6.79e-07!83;UBERON:0009618!6.79e-07!83;UBERON:0007285!6.79e-07!83 | |ontology_enrichment_uberon=UBERON:0004111!4.27e-23!241;UBERON:0000025!3.88e-22!194;UBERON:0003914!2.54e-21!118;UBERON:0000477!1.73e-20!286;UBERON:0004872!2.58e-19!84;UBERON:0000055!1.68e-18!69;UBERON:0001009!3.13e-18!113;UBERON:0002049!5.84e-17!79;UBERON:0007798!5.84e-17!79;UBERON:0004535!9.50e-17!110;UBERON:0000483!1.42e-15!309;UBERON:0000119!1.83e-15!312;UBERON:0001981!2.68e-15!60;UBERON:0007500!2.68e-15!60;UBERON:0004537!2.68e-15!60;UBERON:0006965!2.68e-15!60;UBERON:0003103!6.77e-15!69;UBERON:0007023!1.15e-14!115;UBERON:0001637!3.26e-12!42;UBERON:0003509!3.26e-12!42;UBERON:0004572!3.26e-12!42;UBERON:0007100!6.52e-12!27;UBERON:0000481!3.37e-11!347;UBERON:0002385!4.79e-11!63;UBERON:0001015!4.79e-11!63;UBERON:0000383!4.79e-11!63;UBERON:0004573!2.02e-10!33;UBERON:0004571!2.02e-10!33;UBERON:0005256!2.64e-10!143;UBERON:0000490!3.69e-10!138;UBERON:0000948!3.84e-10!24;UBERON:0005498!3.84e-10!24;UBERON:0004140!3.84e-10!24;UBERON:0009881!3.84e-10!24;UBERON:0004141!3.84e-10!24;UBERON:0003084!3.84e-10!24;UBERON:0007005!3.84e-10!24;UBERON:0004139!3.84e-10!24;UBERON:0004291!3.84e-10!24;UBERON:0001134!4.20e-10!61;UBERON:0002036!4.20e-10!61;UBERON:0003082!4.20e-10!61;UBERON:0004290!1.84e-08!70;UBERON:0000468!3.92e-08!659;UBERON:0002100!6.43e-08!216;UBERON:0004876!1.40e-07!20;UBERON:0003915!5.80e-07!9;UBERON:0004700!5.80e-07!9;UBERON:0001917!5.80e-07!9;UBERON:0000922!6.73e-07!612;UBERON:0000914!6.79e-07!83;UBERON:0002329!6.79e-07!83;UBERON:0003077!6.79e-07!83;UBERON:0003059!6.79e-07!83;UBERON:0007282!6.79e-07!83;UBERON:0009618!6.79e-07!83;UBERON:0007285!6.79e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.02e-11;25!UBERON:0001637;9.05e-10;42!UBERON:0003509;9.05e-10;42!UBERON:0004572;9.05e-10;42!UBERON:0000948;2.17e-09;22!UBERON:0000487;2.31e-09;22!UBERON:0003915;3.97e-09;9!UBERON:0004700;3.97e-09;9!UBERON:0001917;3.97e-09;9!UBERON:0006914;7.72e-09;25!UBERON:0000055;3.42e-08;65!UBERON:0004638;3.71e-08;18!UBERON:0001986;3.71e-08;18!UBERON:0004852;3.71e-08;18!UBERON:0003914;4.10e-08;74!UBERON:0003103;4.25e-08;61!UBERON:0004573;1.38e-07;33!UBERON:0004571;1.38e-07;33!UBERON:0007500;3.16e-07;56!UBERON:0001981;3.16e-07;56!UBERON:0004537;3.16e-07;56 | |||
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| ||
|short_description=p1@SHISA3 | |short_description=p1@SHISA3 | ||
}} | }} |
Latest revision as of 20:13, 17 September 2015
Short description: | p1@SHISA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHISA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -324bp_to_ENST00000319234, NM_001080505, uc003gwp.2_5end |
EntrezGene: | SHISA3 |
HGNC: | 25159 |
UniProt: | A0PJX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.15e-15 | 121 |
endothelial cell | 7.38e-11 | 36 |
meso-epithelial cell | 1.47e-10 | 45 |
endothelial cell of vascular tree | 8.56e-10 | 24 |
endothelial cell of artery | 3.74e-09 | 9 |
lining cell | 1.56e-08 | 58 |
barrier cell | 1.56e-08 | 58 |
blood vessel endothelial cell | 2.95e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.95e-08 | 18 |
electrically responsive cell | 1.12e-07 | 61 |
electrically active cell | 1.12e-07 | 61 |
muscle cell | 1.53e-07 | 55 |
muscle precursor cell | 2.80e-07 | 58 |
myoblast | 2.80e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.80e-07 | 58 |