FFCP PHASE1:Hg19::chr4:57898661..57898707,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:57898661..57898707,- | |||
|coexpression_cluster_id=C772 | |||
|description=CAGE_peak_at_chr4:57898661..57898707,- | |description=CAGE_peak_at_chr4:57898661..57898707,- | ||
|id=chr4:57898661..57898707,- | |id=chr4:57898661..57898707,- | ||
|ontology_enrichment_celltype=CL:0000222!1.23e-18!119;CL:0000055!1.84e-18!180;CL:0000183!3.46e-12!59;CL:0000192!1.58e-11!42;CL:0000514!1.58e-11!42;CL:0000220!2.62e-11!246;CL:0000680!4.06e-11!57;CL:0000056!4.06e-11!57;CL:0000355!4.06e-11!57;CL:0000359!8.56e-11!32;CL:0002321!9.25e-11!248;CL:0000187!1.66e-10!54;CL:0000057!2.12e-10!75;CL:0000393!1.17e-08!60;CL:0000211!1.17e-08!60;CL:0000213!7.80e-07!57;CL:0000215!7.80e-07!57 | |ontology_enrichment_celltype=CL:0000222!1.23e-18!119;CL:0000055!1.84e-18!180;CL:0000183!3.46e-12!59;CL:0000192!1.58e-11!42;CL:0000514!1.58e-11!42;CL:0000220!2.62e-11!246;CL:0000680!4.06e-11!57;CL:0000056!4.06e-11!57;CL:0000355!4.06e-11!57;CL:0000359!8.56e-11!32;CL:0002321!9.25e-11!248;CL:0000187!1.66e-10!54;CL:0000057!2.12e-10!75;CL:0000393!1.17e-08!60;CL:0000211!1.17e-08!60;CL:0000213!7.80e-07!57;CL:0000215!7.80e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.05e-10;32!CL:0000192;1.42e-07;43!CL:1000497;9.91e-07;17!CL:0002518;9.91e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.36e-15,121;CL:0000359,6.74e-11,32;CL:0000192,2.58e-10,43;CL:0000514,2.58e-10,43;CL:0000057,9.30e-10,76;CL:0000680,1.02e-08,58;CL:0000056,1.02e-08,58;CL:0000355,1.02e-08,58;CL:0000187,4.60e-08,55;CL:0002321,1.78e-07,250;CL:1000497,8.26e-07,17;CL:0002518,8.26e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;1.42e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!1.31e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.12e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.59e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;4.22e-10;33!UBERON:0004571;4.22e-10;33!UBERON:0001637;6.25e-10;42!UBERON:0003509;6.25e-10;42!UBERON:0004572;6.25e-10;42!UBERON:0002049;1.35e-08;75!UBERON:0007798;1.35e-08;75!UBERON:0007100;3.43e-08;25!UBERON:0000948;6.79e-08;22!UBERON:0003914;2.46e-07;74!UBERON:0000947;2.56e-07;21!UBERON:0010191;2.56e-07;21!UBERON:0000055;2.89e-07;65 | |||
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| ||
|short_description=p@chr4:57898661..57898707,- | |short_description=p@chr4:57898661..57898707,- | ||
}} | }} |
Latest revision as of 05:53, 30 July 2015
Short description: | p@chr4:57898661..57898707, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:57898661..57898707, - |
Coexpression cluster: | C772_Smooth_Fibroblast_Adipocyte_Preadipocyte_hepatic_Renal_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.36e-15 | 121 |
vascular associated smooth muscle cell | 6.74e-11 | 32 |
smooth muscle cell | 2.58e-10 | 43 |
smooth muscle myoblast | 2.58e-10 | 43 |
fibroblast | 9.30e-10 | 76 |
muscle precursor cell | 1.02e-08 | 58 |
myoblast | 1.02e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.02e-08 | 58 |
muscle cell | 4.60e-08 | 55 |
embryonic cell | 1.78e-07 | 250 |
kidney cell | 8.26e-07 | 17 |
kidney epithelial cell | 8.26e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.59e-08 | 14 |