FFCP PHASE1:Hg19::chr15:44719790..44719848,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:44719790..44719848,+
|short_description=p1@CTDSPL2
|description=CAGE_peak_1_at_CTDSPL2_5end
|association_with_transcript=0bp_to_ENST00000558791,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51496 | |EntrezGene=51496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26936 | |HGNC=26936 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558791,ENST00000560834_5end | |||
|cluster_id=chr15:44719790..44719848,+ | |||
|description=CAGE_peak_1_at_CTDSPL2_5end | |||
|id=chr15:44719790..44719848,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.54e-18!172;CL:0000566!1.54e-18!172;CL:0002032!2.98e-16!165;CL:0000837!2.98e-16!165;CL:0000988!7.48e-16!182;CL:0000738!1.21e-13!140;CL:0000542!5.42e-10!53;CL:0000051!5.42e-10!53;CL:0002031!1.14e-09!124;CL:0000838!1.27e-09!52;CL:0002087!2.06e-09!119;CL:0000763!1.44e-07!112;CL:0000049!1.44e-07!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.56e-18,168;CL:0000988,1.26e-15,177;CL:0002032,1.54e-15,161;CL:0000837,1.54e-15,161;CL:0000738,5.74e-13,136;CL:0000542,5.42e-10,53;CL:0000051,5.42e-10,53;CL:0000838,1.27e-09,52;CL:0002031,4.59e-09,120;CL:0002087,8.28e-09,115;CL:0000763,5.24e-07,108;CL:0000049,5.24e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.59e-16!235;DOID:14566!9.25e-15!239;DOID:0050687!3.27e-11!143;DOID:1240!1.33e-08!39;DOID:0050686!3.67e-08!137;DOID:2531!7.32e-08!51;DOID:0060083!7.32e-08!51;DOID:305!3.47e-07!106;DOID:3095!4.01e-07!22;DOID:2994!4.01e-07!22;DOID:8692!7.74e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.06e-07;22!DOID:2994;4.06e-07;22!DOID:1240;5.05e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.59e-16,235;DOID:14566,9.25e-15,239;DOID:0050687,3.27e-11,143;DOID:1240,1.33e-08,39;DOID:0050686,3.67e-08,137;DOID:2531,7.32e-08,51;DOID:0060083,7.32e-08,51;DOID:305,3.47e-07,106;DOID:3095,4.01e-07,22;DOID:2994,4.01e-07,22;DOID:8692,7.74e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.94e-08!94;UBERON:0001016!9.94e-08!94;UBERON:0001017!4.63e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.31e-08,89;UBERON:0001017,4.22e-07,81 | |||
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|short_description=p1@CTDSPL2 | |||
}} | }} |
Latest revision as of 18:40, 17 September 2015
Short description: | p1@CTDSPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTDSPL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000558791, ENST00000560834_5end |
EntrezGene: | CTDSPL2 |
HGNC: | 26936 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.56e-18 | 168 |
hematopoietic cell | 1.26e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.54e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-15 | 161 |
leukocyte | 5.74e-13 | 136 |
lymphocyte | 5.42e-10 | 53 |
common lymphoid progenitor | 5.42e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.27e-09 | 52 |
hematopoietic lineage restricted progenitor cell | 4.59e-09 | 120 |
nongranular leukocyte | 8.28e-09 | 115 |
myeloid cell | 5.24e-07 | 108 |
common myeloid progenitor | 5.24e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.31e-08 | 89 |
central nervous system | 4.22e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.59e-16 | 235 |
disease of cellular proliferation | 9.25e-15 | 239 |
cell type cancer | 3.27e-11 | 143 |
leukemia | 1.33e-08 | 39 |
organ system cancer | 3.67e-08 | 137 |
hematologic cancer | 7.32e-08 | 51 |
immune system cancer | 7.32e-08 | 51 |
carcinoma | 3.47e-07 | 106 |
germ cell and embryonal cancer | 4.01e-07 | 22 |
germ cell cancer | 4.01e-07 | 22 |
myeloid leukemia | 7.74e-07 | 31 |