FFCP PHASE1:Hg19::chr5:14492668..14492692,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7204 | |EntrezGene=7204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |HGNC=12303 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=189bp_to_ENST00000503399_5end | |association_with_transcript=189bp_to_ENST00000503399_5end | ||
|cluster_id=chr5:14492668..14492692,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_19_at_TRIO_5end | |description=CAGE_peak_19_at_TRIO_5end | ||
|id=chr5:14492668..14492692,+ | |id=chr5:14492668..14492692,+ | ||
|ontology_enrichment_celltype=CL:0002194!7.65e-17!63;CL:0000576!7.65e-17!63;CL:0000040!7.65e-17!63;CL:0000559!7.65e-17!63;CL:0000766!5.36e-16!76;CL:0002009!6.01e-16!65;CL:0000839!7.95e-15!70;CL:0000557!1.91e-14!71;CL:0000763!1.13e-09!112;CL:0000049!1.13e-09!112;CL:0000738!2.36e-09!140;CL:0002087!9.23e-08!119;CL:0000451!1.26e-07!10;CL:0002057!8.34e-07!42 | |ontology_enrichment_celltype=CL:0002194!7.65e-17!63;CL:0000576!7.65e-17!63;CL:0000040!7.65e-17!63;CL:0000559!7.65e-17!63;CL:0000766!5.36e-16!76;CL:0002009!6.01e-16!65;CL:0000839!7.95e-15!70;CL:0000557!1.91e-14!71;CL:0000763!1.13e-09!112;CL:0000049!1.13e-09!112;CL:0000738!2.36e-09!140;CL:0002087!9.23e-08!119;CL:0000451!1.26e-07!10;CL:0002057!8.34e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000451;9.73e-28;10!CL:0000235;7.19e-27;6!CL:0000990;4.08e-25;8!CL:0002619;2.85e-20;3!CL:0000840;9.26e-18;5!CL:0000473;2.65e-12;39!CL:0000234;2.65e-12;39!CL:0000766;1.54e-09;69!CL:0000784;1.56e-09;3!CL:0000576;1.35e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,7.75e-31,59;CL:0000576,7.75e-31,59;CL:0000040,7.75e-31,59;CL:0000559,7.75e-31,59;CL:0002009,1.01e-29,61;CL:0000451,6.67e-28,10;CL:0000766,1.02e-27,72;CL:0000839,3.16e-27,66;CL:0000235,4.84e-27,6;CL:0000557,9.03e-27,67;CL:0000990,2.63e-25,8;CL:0000763,8.24e-24,108;CL:0000049,8.24e-24,108;CL:0002619,2.77e-20,3;CL:0000738,4.11e-18,136;CL:0000840,9.48e-18,5;CL:0001029,9.48e-18,5;CL:0000037,2.49e-15,168;CL:0002032,1.47e-14,161;CL:0000837,1.47e-14,161;CL:0000988,2.55e-14,177;CL:0002087,3.77e-14,115;CL:0000473,6.51e-14,48;CL:0000234,6.51e-14,48;CL:0002031,2.06e-13,120;CL:0000784,1.59e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000049;6.80e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.38e-17!102;UBERON:0003061!1.38e-17!102;UBERON:0002193!2.63e-17!112;UBERON:0002371!1.73e-11!80;UBERON:0002405!5.14e-11!115;UBERON:0001474!6.69e-10!86;UBERON:0004765!4.15e-09!101;UBERON:0001434!4.15e-09!101;UBERON:0000178!6.69e-07!15;UBERON:0000179!6.69e-07!15;UBERON:0000463!6.69e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!1.38e-17!102;UBERON:0003061!1.38e-17!102;UBERON:0002193!2.63e-17!112;UBERON:0002371!1.73e-11!80;UBERON:0002405!5.14e-11!115;UBERON:0001474!6.69e-10!86;UBERON:0004765!4.15e-09!101;UBERON:0001434!4.15e-09!101;UBERON:0000178!6.69e-07!15;UBERON:0000179!6.69e-07!15;UBERON:0000463!6.69e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;7.26e-08;1!UBERON:0006518;7.26e-08;1!UBERON:0008949;7.26e-08;1!UBERON:0000101;7.26e-08;1!UBERON:0002167;7.26e-08;1!UBERON:0002372;2.04e-07;1!UBERON:0001961;2.04e-07;1!UBERON:0001744;2.04e-07;1!UBERON:0001042;2.04e-07;1!UBERON:0001735;2.04e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.32e-23,76;UBERON:0001474,2.94e-21,82;UBERON:0002405,1.48e-20,93;UBERON:0002390,2.29e-19,98;UBERON:0003061,2.29e-19,98;UBERON:0002193,3.05e-19,108;UBERON:0004765,4.63e-19,90;UBERON:0001434,8.35e-17,100;UBERON:0002204,8.53e-10,167;UBERON:0003081,2.20e-08,203;UBERON:0002171,6.80e-08,1;UBERON:0006518,6.80e-08,1;UBERON:0008949,6.80e-08,1;UBERON:0000101,6.80e-08,1;UBERON:0002167,6.80e-08,1;UBERON:0002372,2.98e-07,1;UBERON:0001961,2.98e-07,1;UBERON:0001744,2.98e-07,1;UBERON:0001735,2.98e-07,1 | |||
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| ||
|short_description=p19@TRIO | |short_description=p19@TRIO | ||
}} | }} |
Latest revision as of 19:42, 15 September 2015
Short description: | p19@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TRIO_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 189bp_to_ENST00000503399_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 7.75e-31 | 59 |
monocyte | 7.75e-31 | 59 |
monoblast | 7.75e-31 | 59 |
promonocyte | 7.75e-31 | 59 |
macrophage dendritic cell progenitor | 1.01e-29 | 61 |
dendritic cell | 6.67e-28 | 10 |
myeloid leukocyte | 1.02e-27 | 72 |
myeloid lineage restricted progenitor cell | 3.16e-27 | 66 |
macrophage | 4.84e-27 | 6 |
granulocyte monocyte progenitor cell | 9.03e-27 | 67 |
conventional dendritic cell | 2.63e-25 | 8 |
myeloid cell | 8.24e-24 | 108 |
common myeloid progenitor | 8.24e-24 | 108 |
adult endothelial progenitor cell | 2.77e-20 | 3 |
leukocyte | 4.11e-18 | 136 |
immature conventional dendritic cell | 9.48e-18 | 5 |
common dendritic progenitor | 9.48e-18 | 5 |
hematopoietic stem cell | 2.49e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.47e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-14 | 161 |
hematopoietic cell | 2.55e-14 | 177 |
nongranular leukocyte | 3.77e-14 | 115 |
defensive cell | 6.51e-14 | 48 |
phagocyte | 6.51e-14 | 48 |
hematopoietic lineage restricted progenitor cell | 2.06e-13 | 120 |
plasmacytoid dendritic cell | 1.59e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.32e-23 | 76 |
bone element | 2.94e-21 | 82 |
immune system | 1.48e-20 | 93 |
hematopoietic system | 2.29e-19 | 98 |
blood island | 2.29e-19 | 98 |
hemolymphoid system | 3.05e-19 | 108 |
skeletal element | 4.63e-19 | 90 |
skeletal system | 8.35e-17 | 100 |
musculoskeletal system | 8.53e-10 | 167 |
lateral plate mesoderm | 2.20e-08 | 203 |
lower lobe of right lung | 6.80e-08 | 1 |
right lung lobe | 6.80e-08 | 1 |
lower lobe of lung | 6.80e-08 | 1 |
lobe of lung | 6.80e-08 | 1 |
right lung | 6.80e-08 | 1 |
tonsil | 2.98e-07 | 1 |
mucosa-associated lymphoid tissue | 2.98e-07 | 1 |
lymphoid tissue | 2.98e-07 | 1 |
tonsillar ring | 2.98e-07 | 1 |