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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=2559
|EntrezGene=2559
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=4080
|HGNC=4080
|TSSclassifier=strong
|UniProt=Q16445
|UniProt=Q16445
|association_with_transcript=35bp_to_NM_000811,uc003lyu.2_5end
|association_with_transcript=35bp_to_NM_000811,uc003lyu.2_5end
|cluster_id=chr5:161112693..161112696,+
|coexpression_cluster_id=C11
|description=CAGE_peak_12_at_GABRA6_5end
|description=CAGE_peak_12_at_GABRA6_5end
|id=chr5:161112693..161112696,+
|id=chr5:161112693..161112696,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0002037!2.58e-74!6;UBERON:0006215!2.58e-74!6;UBERON:0004733!5.11e-66!12;UBERON:0002028!5.11e-66!12;UBERON:0007277!5.11e-66!12;UBERON:0004732!4.89e-61!13;UBERON:0003076!4.60e-53!15;UBERON:0003057!4.60e-53!15;UBERON:0002680!5.60e-50!9;UBERON:0001895!5.60e-50!9;UBERON:0010092!5.60e-50!9;UBERON:0001896!1.12e-17!3;UBERON:0005290!1.12e-17!3;UBERON:0010096!1.12e-17!3;UBERON:0001049!1.72e-14!57;UBERON:0005068!1.72e-14!57;UBERON:0006241!1.72e-14!57;UBERON:0007135!1.72e-14!57;UBERON:0002616!4.87e-14!59;UBERON:0000955!5.31e-12!69;UBERON:0006238!5.31e-12!69;UBERON:0001017!2.82e-10!82;UBERON:0003075!5.98e-10!86;UBERON:0007284!5.98e-10!86;UBERON:0005743!7.60e-10!86;UBERON:0002346!1.51e-09!90;UBERON:0000073!5.24e-09!94;UBERON:0000063!5.24e-09!97;UBERON:0001016!5.24e-09!94;UBERON:0007023!1.02e-07!115;UBERON:0002298!1.80e-07!8;UBERON:0000033!3.69e-07!123;UBERON:0000153!7.27e-07!129;UBERON:0007811!7.27e-07!129
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.24e-09;53!UBERON:0002616;8.24e-09;53!UBERON:0001016;9.24e-08;83!UBERON:0000955;1.67e-07;68!UBERON:0001017;8.54e-07;75
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89
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|short_description=p12@GABRA6
|short_description=p12@GABRA6
}}
}}

Latest revision as of 17:11, 16 September 2015

Short description:p12@GABRA6
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_12_at_GABRA6_5end
Coexpression cluster:C11_cerebellum_medulla_pons_parietal_occipital_middle_medial
Association with transcript: 35bp_to_NM_000811, uc003lyu.2_5end
EntrezGene:GABRA6
HGNC: 4080
UniProt: Q16445
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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