FFCP PHASE1:Hg19::chr15:65935239..65935275,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:65935239..65935275,+
|short_description=p6@SLC24A1
|description=CAGE_peak_6_at_SLC24A1_5end
|association_with_transcript=0bp_to_ENST00000449142,NM_0012547...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9187 | |EntrezGene=9187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10975 | |HGNC=10975 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000449142,NM_001254740,uc010uji.1_5end | |||
|cluster_id=chr15:65935239..65935275,+ | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_6_at_SLC24A1_5end | |||
|id=chr15:65935239..65935275,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.31e-19!24;CL:0000071!1.72e-15!18;CL:0002546!1.72e-15!18;CL:0000115!1.19e-12!35;CL:0000213!2.89e-10!57;CL:0000215!2.89e-10!57;CL:0002078!6.28e-09!44;CL:1000413!1.40e-08!9;CL:0000076!1.93e-08!62;CL:0002544!1.59e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002144;5.07e-29;3!CL:0002139;1.75e-23;24!CL:0000071;3.87e-18;18!CL:0000115;4.19e-12;36!CL:0002078;3.01e-10;45!CL:0002544;4.87e-07;6!CL:0002138;6.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,5.09e-29,3;CL:0002139,1.34e-23,24;CL:0000071,3.24e-18,18;CL:0002546,3.24e-18,18;CL:0000115,2.06e-15,36;CL:0002078,3.95e-12,45;CL:0000213,3.50e-09,58;CL:0000215,3.50e-09,58;CL:0002544,4.26e-07,6;CL:0005020,6.29e-07,6;CL:0002138,6.29e-07,6;CL:0005022,6.29e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.87e-18;18!UBERON:0001045;2.62e-10;1!CL:0005022;6.88e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.94e-21!115;UBERON:0001986!1.72e-15!18;UBERON:0004638!1.72e-15!18;UBERON:0004852!1.72e-15!18;UBERON:0000487!6.44e-12!22;UBERON:0006914!5.22e-10!25;UBERON:0000467!1.32e-09!625;UBERON:0000480!1.54e-09!626;UBERON:0004111!1.86e-09!241;UBERON:0000477!2.60e-09!286;UBERON:0000055!5.67e-09!69;UBERON:0000468!1.25e-08!659;UBERON:0003915!1.40e-08!9;UBERON:0004700!1.40e-08!9;UBERON:0001917!1.40e-08!9;UBERON:0002046!1.57e-08!5;UBERON:0004117!1.57e-08!5;UBERON:0007689!1.57e-08!5;UBERON:0007123!1.57e-08!5;UBERON:0003091!1.57e-08!5;UBERON:0002465!1.40e-07!10;UBERON:0002049!5.69e-07!79;UBERON:0007798!5.69e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.07e-29;3!UBERON:0001915;5.07e-29;3!UBERON:0001982;5.07e-29;3!UBERON:0004638;3.87e-18;18!UBERON:0001986;3.87e-18;18!UBERON:0004852;3.87e-18;18!UBERON:0000487;9.12e-15;22!UBERON:0006914;6.08e-13;25!UBERON:0002426;1.13e-10;1!UBERON:0003831;1.13e-10;1!UBERON:0003898;1.13e-10;1!UBERON:0004830;1.13e-10;1!UBERON:0003830;1.13e-10;1!UBERON:0005175;1.13e-10;1!UBERON:0001774;1.13e-10;1!UBERON:0001103;1.13e-10;1!UBERON:0006834;2.62e-10;1!UBERON:0001154;2.62e-10;1!UBERON:0001153;2.62e-10;1!UBERON:0009854;2.62e-10;1!UBERON:0000490;1.30e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,5.09e-29,3;UBERON:0001915,5.09e-29,3;UBERON:0001982,5.09e-29,3;UBERON:0004638,3.24e-18,18;UBERON:0001986,3.24e-18,18;UBERON:0004852,3.24e-18,18;UBERON:0000487,7.89e-15,22;UBERON:0006914,5.36e-13,25;UBERON:0002426,1.08e-10,1;UBERON:0003831,1.08e-10,1;UBERON:0003898,1.08e-10,1;UBERON:0004830,1.08e-10,1;UBERON:0003830,1.08e-10,1;UBERON:0005175,1.08e-10,1;UBERON:0001774,1.08e-10,1;UBERON:0001103,1.08e-10,1;UBERON:0010084,1.08e-10,1;UBERON:0006834,3.01e-10,1;UBERON:0001154,3.96e-10,1;UBERON:0001153,3.96e-10,1;UBERON:0001045,3.96e-10,1;UBERON:0000055,1.11e-07,68 | |||
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| ||
|short_description=p6@SLC24A1 | |||
}} | }} |
Latest revision as of 15:34, 18 September 2015
Short description: | p6@SLC24A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC24A1_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 0bp_to_ENST00000449142, NM_001254740, uc010uji.1_5end |
EntrezGene: | SLC24A1 |
HGNC: | 10975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 5.09e-29 | 3 |
endothelial cell of vascular tree | 1.34e-23 | 24 |
blood vessel endothelial cell | 3.24e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.24e-18 | 18 |
endothelial cell | 2.06e-15 | 36 |
meso-epithelial cell | 3.95e-12 | 45 |
lining cell | 3.50e-09 | 58 |
barrier cell | 3.50e-09 | 58 |
aortic endothelial cell | 4.26e-07 | 6 |
lymphangioblast | 6.29e-07 | 6 |
endothelial cell of lymphatic vessel | 6.29e-07 | 6 |
vascular lymphangioblast | 6.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 5.09e-29 | 3 |
endothelium of capillary | 5.09e-29 | 3 |
capillary | 5.09e-29 | 3 |
blood vessel endothelium | 3.24e-18 | 18 |
endothelium | 3.24e-18 | 18 |
cardiovascular system endothelium | 3.24e-18 | 18 |
simple squamous epithelium | 7.89e-15 | 22 |
squamous epithelium | 5.36e-13 | 25 |
chest muscle | 1.08e-10 | 1 |
respiratory system muscle | 1.08e-10 | 1 |
skeletal muscle of trunk | 1.08e-10 | 1 |
respiratory system skeletal muscle | 1.08e-10 | 1 |
thoracic segment muscle | 1.08e-10 | 1 |
chest organ | 1.08e-10 | 1 |
muscle of trunk | 1.08e-10 | 1 |
diaphragm | 1.08e-10 | 1 |
future diaphragm | 1.08e-10 | 1 |
uterus or analog | 3.01e-10 | 1 |
vermiform appendix | 3.96e-10 | 1 |
caecum | 3.96e-10 | 1 |
midgut | 3.96e-10 | 1 |
vessel | 1.11e-07 | 68 |