FFCP PHASE1:Hg19::chr6:39787581..39787589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:39787581..39787589,- | |||
|coexpression_cluster_id=C397 | |||
|description=CAGE_peak_at_chr6:39787581..39787589,- | |description=CAGE_peak_at_chr6:39787581..39787589,- | ||
|id=chr6:39787581..39787589,- | |id=chr6:39787581..39787589,- | ||
|ontology_enrichment_celltype=CL:0000188!1.33e-08!9;CL:0000594!3.47e-07!3 | |ontology_enrichment_celltype=CL:0000188!1.33e-08!9;CL:0000594!3.47e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002262;2.23e-11;2!CL:1000398;2.23e-11;2!CL:0000188;9.65e-10;9!CL:0002590;4.84e-08;3!CL:0002619;6.78e-08;3!CL:0000515;6.78e-08;3!CL:0000214;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.23e-11,2;CL:1000398,2.23e-11,2;CL:0000188,1.20e-09,9;CL:0002590,4.84e-08,3;CL:0000214,5.93e-08,3;CL:0002619,6.34e-08,3;CL:0000222,8.73e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.37e-10!115;UBERON:0006331!1.34e-07!3;UBERON:0000988!6.24e-07!3;UBERON:0001049!8.44e-07!57;UBERON:0005068!8.44e-07!57;UBERON:0006241!8.44e-07!57;UBERON:0007135!8.44e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!6.37e-10!115;UBERON:0006331!1.34e-07!3;UBERON:0000988!6.24e-07!3;UBERON:0001049!8.44e-07!57;UBERON:0005068!8.44e-07!57;UBERON:0006241!8.44e-07!57;UBERON:0007135!8.44e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;9.39e-12;16!UBERON:0002036;9.39e-12;16!UBERON:0001281;2.23e-11;2!UBERON:0003497;2.23e-11;2!UBERON:0003909;2.23e-11;2!UBERON:0003835;2.23e-11;2!UBERON:0001280;5.18e-08;3!UBERON:0004647;5.18e-08;3!UBERON:0006915;6.78e-08;3!UBERON:0007616;6.78e-08;3!UBERON:0002217;6.78e-08;3!UBERON:0002018;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.23e-11,2;UBERON:0003497,2.23e-11,2;UBERON:0003909,2.23e-11,2;UBERON:0003835,2.23e-11,2;UBERON:0000486,1.68e-08,83;UBERON:0001280,5.18e-08,3;UBERON:0004647,5.18e-08,3;UBERON:0005171,5.18e-08,3;UBERON:0006915,5.93e-08,3;UBERON:0007616,5.93e-08,3;UBERON:0002217,5.93e-08,3;UBERON:0002018,5.93e-08,3;UBERON:0002329,4.55e-07,71;UBERON:0003059,4.55e-07,71;UBERON:0007282,4.55e-07,71;UBERON:0004290,4.55e-07,71;UBERON:0009618,4.55e-07,71;UBERON:0003077,5.70e-07,72;UBERON:0007285,5.70e-07,72;UBERON:0007524,7.10e-07,73 | |||
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| ||
|short_description=p@chr6:39787581..39787589,- | |short_description=p@chr6:39787581..39787589,- | ||
}} | }} |
Latest revision as of 01:26, 31 July 2015
Short description: | p@chr6:39787581..39787589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:39787581..39787589, - |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.23e-11 | 2 |
endothelial cell of hepatic sinusoid | 2.23e-11 | 2 |
cell of skeletal muscle | 1.20e-09 | 9 |
smooth muscle cell of the brain vasculature | 4.84e-08 | 3 |
synovial cell | 5.93e-08 | 3 |
adult endothelial progenitor cell | 6.34e-08 | 3 |
mesodermal cell | 8.73e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.23e-11 | 2 |
abdomen blood vessel | 2.23e-11 | 2 |
sinusoid | 2.23e-11 | 2 |
abdominal segment blood vessel | 2.23e-11 | 2 |
multilaminar epithelium | 1.68e-08 | 83 |
liver parenchyma | 5.18e-08 | 3 |
liver lobule | 5.18e-08 | 3 |
hepatic duct | 5.18e-08 | 3 |
stratified squamous epithelium | 5.93e-08 | 3 |
layer of synovial tissue | 5.93e-08 | 3 |
synovial joint | 5.93e-08 | 3 |
synovial membrane of synovial joint | 5.93e-08 | 3 |
somite | 4.55e-07 | 71 |
presomitic mesoderm | 4.55e-07 | 71 |
presumptive segmental plate | 4.55e-07 | 71 |
dermomyotome | 4.55e-07 | 71 |
trunk paraxial mesoderm | 4.55e-07 | 71 |
paraxial mesoderm | 5.70e-07 | 72 |
presumptive paraxial mesoderm | 5.70e-07 | 72 |
dense mesenchyme tissue | 7.10e-07 | 73 |