FFCP PHASE1:Hg19::chr7:106809432..106809455,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26959 | |EntrezGene=26959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23200 | |HGNC=23200 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQU7,C9JAW1 | |UniProt=C9JQU7,C9JAW1 | ||
|association_with_transcript=0bp_to_ENST00000464009,ENST00000478930_5end | |association_with_transcript=0bp_to_ENST00000464009,ENST00000478930_5end | ||
|cluster_id=chr7:106809432..106809455,+ | |||
|coexpression_cluster_id=C509 | |||
|description=CAGE_peak_1_at_HBP1_5end | |description=CAGE_peak_1_at_HBP1_5end | ||
|id=chr7:106809432..106809455,+ | |id=chr7:106809432..106809455,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.03e-24!42;CL:0000766!3.22e-23!76;CL:0000738!3.48e-23!140;CL:0000860!7.31e-21!45;CL:0000839!5.23e-20!70;CL:0002031!9.38e-19!124;CL:0000557!1.10e-18!71;CL:0002009!1.70e-17!65;CL:0002194!8.96e-17!63;CL:0000576!8.96e-17!63;CL:0000040!8.96e-17!63;CL:0000559!8.96e-17!63;CL:0002087!7.64e-16!119;CL:0000037!2.46e-13!172;CL:0000566!2.46e-13!172;CL:0002032!1.70e-12!165;CL:0000837!1.70e-12!165;CL:0000763!5.91e-12!112;CL:0000049!5.91e-12!112;CL:0000988!1.17e-10!182;CL:0002320!3.99e-07!365;CL:0000134!6.89e-07!358 | |ontology_enrichment_celltype=CL:0002057!2.03e-24!42;CL:0000766!3.22e-23!76;CL:0000738!3.48e-23!140;CL:0000860!7.31e-21!45;CL:0000839!5.23e-20!70;CL:0002031!9.38e-19!124;CL:0000557!1.10e-18!71;CL:0002009!1.70e-17!65;CL:0002194!8.96e-17!63;CL:0000576!8.96e-17!63;CL:0000040!8.96e-17!63;CL:0000559!8.96e-17!63;CL:0002087!7.64e-16!119;CL:0000037!2.46e-13!172;CL:0000566!2.46e-13!172;CL:0002032!1.70e-12!165;CL:0000837!1.70e-12!165;CL:0000763!5.91e-12!112;CL:0000049!5.91e-12!112;CL:0000988!1.17e-10!182;CL:0002320!3.99e-07!365;CL:0000134!6.89e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-18;33!CL:0002057;1.05e-18;33!CL:0000473;2.24e-15;39!CL:0000234;2.24e-15;39!CL:0000576;6.22e-14;48!CL:0000766;3.42e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.80e-26,72;CL:0000738,2.50e-25,136;CL:0000860,2.03e-24,42;CL:0002057,2.03e-24,42;CL:0000473,4.82e-24,48;CL:0000234,4.82e-24,48;CL:0000839,4.09e-23,66;CL:0000557,1.29e-21,67;CL:0002031,9.08e-21,120;CL:0002009,1.78e-20,61;CL:0002194,9.87e-20,59;CL:0000576,9.87e-20,59;CL:0000040,9.87e-20,59;CL:0000559,9.87e-20,59;CL:0002087,1.08e-17,115;CL:0000037,1.16e-14,168;CL:0002032,8.52e-14,161;CL:0000837,8.52e-14,161;CL:0000763,1.51e-13,108;CL:0000049,1.51e-13,108;CL:0000988,3.37e-12,177;CL:0002320,6.63e-08,361;CL:0000134,1.18e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;8.19e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.71e-21!102;UBERON:0003061!4.71e-21!102;UBERON:0002193!2.34e-20!112;UBERON:0002371!1.49e-16!80;UBERON:0007023!2.17e-14!115;UBERON:0001474!6.09e-14!86;UBERON:0002405!6.05e-13!115;UBERON:0004765!8.55e-13!101;UBERON:0001434!8.55e-13!101;UBERON:0003081!2.29e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!4.71e-21!102;UBERON:0003061!4.71e-21!102;UBERON:0002193!2.34e-20!112;UBERON:0002371!1.49e-16!80;UBERON:0007023!2.17e-14!115;UBERON:0001474!6.09e-14!86;UBERON:0002405!6.05e-13!115;UBERON:0004765!8.55e-13!101;UBERON:0001434!8.55e-13!101;UBERON:0003081!2.29e-08!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.58e-23,98;UBERON:0003061,1.58e-23,98;UBERON:0002193,1.25e-22,108;UBERON:0002371,4.98e-19,76;UBERON:0002405,1.67e-18,93;UBERON:0004765,5.49e-17,90;UBERON:0001474,4.89e-16,82;UBERON:0001434,6.12e-15,100;UBERON:0007023,2.72e-14,114;UBERON:0003081,1.63e-11,203;UBERON:0002204,1.14e-07,167;UBERON:0002384,1.88e-07,371 | |||
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| ||
|short_description=p1@HBP1 | |short_description=p1@HBP1 | ||
}} | }} |
Latest revision as of 01:11, 25 September 2015
Short description: | p1@HBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HBP1_5end |
Coexpression cluster: | C509_Neutrophils_Eosinophils_CD14_Whole_CD34_CD19_Peripheral |
Association with transcript: | 0bp_to_ENST00000464009, ENST00000478930_5end |
EntrezGene: | HBP1 |
HGNC: | 23200 |
UniProt: | C9JQU7C9JAW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.80e-26 | 72 |
leukocyte | 2.50e-25 | 136 |
classical monocyte | 2.03e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-24 | 42 |
defensive cell | 4.82e-24 | 48 |
phagocyte | 4.82e-24 | 48 |
myeloid lineage restricted progenitor cell | 4.09e-23 | 66 |
granulocyte monocyte progenitor cell | 1.29e-21 | 67 |
hematopoietic lineage restricted progenitor cell | 9.08e-21 | 120 |
macrophage dendritic cell progenitor | 1.78e-20 | 61 |
monopoietic cell | 9.87e-20 | 59 |
monocyte | 9.87e-20 | 59 |
monoblast | 9.87e-20 | 59 |
promonocyte | 9.87e-20 | 59 |
nongranular leukocyte | 1.08e-17 | 115 |
hematopoietic stem cell | 1.16e-14 | 168 |
hematopoietic oligopotent progenitor cell | 8.52e-14 | 161 |
hematopoietic multipotent progenitor cell | 8.52e-14 | 161 |
myeloid cell | 1.51e-13 | 108 |
common myeloid progenitor | 1.51e-13 | 108 |
hematopoietic cell | 3.37e-12 | 177 |
connective tissue cell | 6.63e-08 | 361 |
mesenchymal cell | 1.18e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.58e-23 | 98 |
blood island | 1.58e-23 | 98 |
hemolymphoid system | 1.25e-22 | 108 |
bone marrow | 4.98e-19 | 76 |
immune system | 1.67e-18 | 93 |
skeletal element | 5.49e-17 | 90 |
bone element | 4.89e-16 | 82 |
skeletal system | 6.12e-15 | 100 |
adult organism | 2.72e-14 | 114 |
lateral plate mesoderm | 1.63e-11 | 203 |
musculoskeletal system | 1.14e-07 | 167 |
connective tissue | 1.88e-07 | 371 |