FFCP PHASE1:Hg19::chr7:18535614..18535625,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9734 | |EntrezGene=9734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |HGNC=14065 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCF1 | |UniProt=B5MCF1 | ||
|association_with_transcript=-164bp_to_ENST00000406072_5end | |association_with_transcript=-164bp_to_ENST00000406072_5end | ||
|cluster_id=chr7:18535614..18535625,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_24_at_HDAC9_5end | |description=CAGE_peak_24_at_HDAC9_5end | ||
|id=chr7:18535614..18535625,+ | |id=chr7:18535614..18535625,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:5409;1.21e-13;4!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6!DOID:1325;2.26e-08;7!DOID:3904;2.26e-08;7!DOID:3905;8.61e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:5409,1.13e-13,4;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6;DOID:1325,2.18e-08,7;DOID:3904,2.18e-08,7;DOID:3905,8.37e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.06e-15!94;UBERON:0001016!3.06e-15!94;UBERON:0001017!8.51e-15!82;UBERON:0005743!8.42e-14!86;UBERON:0000924!2.35e-13!173;UBERON:0006601!2.35e-13!173;UBERON:0002346!6.31e-13!90;UBERON:0001049!3.10e-12!57;UBERON:0005068!3.10e-12!57;UBERON:0006241!3.10e-12!57;UBERON:0007135!3.10e-12!57;UBERON:0004121!5.28e-12!169;UBERON:0003075!2.36e-11!86;UBERON:0007284!2.36e-11!86;UBERON:0000955!2.53e-11!69;UBERON:0006238!2.53e-11!69;UBERON:0002616!2.50e-10!59;UBERON:0002780!3.96e-10!41;UBERON:0001890!3.96e-10!41;UBERON:0006240!3.96e-10!41;UBERON:0003080!8.25e-10!42;UBERON:0007023!1.31e-09!115;UBERON:0001893!2.79e-09!34;UBERON:0001869!1.46e-08!32;UBERON:0001950!1.99e-08!20;UBERON:0002791!3.15e-08!33;UBERON:0000956!4.62e-08!25;UBERON:0000203!4.62e-08!25;UBERON:0002020!5.59e-08!34;UBERON:0003528!5.59e-08!34;UBERON:0003056!1.33e-07!61;UBERON:0000033!1.43e-07!123;UBERON:0002619!1.53e-07!22;UBERON:0000153!6.05e-07!129;UBERON:0007811!6.05e-07!129 | |ontology_enrichment_uberon=UBERON:0000073!3.06e-15!94;UBERON:0001016!3.06e-15!94;UBERON:0001017!8.51e-15!82;UBERON:0005743!8.42e-14!86;UBERON:0000924!2.35e-13!173;UBERON:0006601!2.35e-13!173;UBERON:0002346!6.31e-13!90;UBERON:0001049!3.10e-12!57;UBERON:0005068!3.10e-12!57;UBERON:0006241!3.10e-12!57;UBERON:0007135!3.10e-12!57;UBERON:0004121!5.28e-12!169;UBERON:0003075!2.36e-11!86;UBERON:0007284!2.36e-11!86;UBERON:0000955!2.53e-11!69;UBERON:0006238!2.53e-11!69;UBERON:0002616!2.50e-10!59;UBERON:0002780!3.96e-10!41;UBERON:0001890!3.96e-10!41;UBERON:0006240!3.96e-10!41;UBERON:0003080!8.25e-10!42;UBERON:0007023!1.31e-09!115;UBERON:0001893!2.79e-09!34;UBERON:0001869!1.46e-08!32;UBERON:0001950!1.99e-08!20;UBERON:0002791!3.15e-08!33;UBERON:0000956!4.62e-08!25;UBERON:0000203!4.62e-08!25;UBERON:0002020!5.59e-08!34;UBERON:0003528!5.59e-08!34;UBERON:0003056!1.33e-07!61;UBERON:0000033!1.43e-07!123;UBERON:0002619!1.53e-07!22;UBERON:0000153!6.05e-07!129;UBERON:0007811!6.05e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0.331737779793674,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0.995261931078505,0,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0,0,0,9.09038104922453,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0,0.468334905806882,0.434763085832475,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0.247871528518004,0,0,0.315446980005013,0,0,0,0.192687675289379,0,0,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0.546974809018219,0.548257766857182,0,0.351742488719241,0.383287282918786,0,0.336283722218824,0.606965604236632,0,0,0,0,0,0.263091094251396,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0.467878926924211,2.58636007709779,0,0,0,1.35866559210006,0,0,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p24@HDAC9 | |short_description=p24@HDAC9 | ||
}} | }} |
Latest revision as of 14:15, 17 September 2015
Short description: | p24@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_HDAC9_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -164bp_to_ENST00000406072_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | B5MCF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
lung small cell carcinoma | 1.13e-13 | 4 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |
bronchus cancer | 2.18e-08 | 7 |
bronchogenic carcinoma | 2.18e-08 | 7 |
lung carcinoma | 8.37e-07 | 9 |