FFCP PHASE1:Hg19::chr7:29233570..29233581,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt=P52757 | |UniProt=P52757 | ||
|association_with_transcript=-446bp_to_ENST00000222792_5end | |association_with_transcript=-446bp_to_ENST00000222792_5end | ||
|cluster_id=chr7:29233570..29233581,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_26_at_CHN2_5end | |description=CAGE_peak_26_at_CHN2_5end | ||
|id=chr7:29233570..29233581,+ | |id=chr7:29233570..29233581,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.85e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;3.49e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.49e-09,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;9.01e-60;6!UBERON:0002680;3.11e-40;9!UBERON:0001895;3.11e-40;9!UBERON:0004733;1.91e-30;12!UBERON:0002028;1.91e-30;12!UBERON:0004732;3.48e-28;13!UBERON:0000002;7.25e-08;6!UBERON:0001560;7.25e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.15e-60,6;UBERON:0006215,8.15e-60,6;UBERON:0002680,2.91e-40,9;UBERON:0001895,2.91e-40,9;UBERON:0010092,2.91e-40,9;UBERON:0004733,1.81e-30,12;UBERON:0002028,1.81e-30,12;UBERON:0007277,1.81e-30,12;UBERON:0004732,3.33e-28,13;UBERON:0003076,1.40e-24,15;UBERON:0003057,1.40e-24,15;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6;UBERON:0000073,1.99e-07,53;UBERON:0002616,1.99e-07,53;UBERON:0001049,4.48e-07,56;UBERON:0005068,4.48e-07,56;UBERON:0006241,4.48e-07,56;UBERON:0007135,4.48e-07,56 | |||
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| ||
|short_description=p26@CHN2 | |short_description=p26@CHN2 | ||
}} | }} |
Latest revision as of 03:56, 18 September 2015
Short description: | p26@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_CHN2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -446bp_to_ENST00000222792_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | P52757 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.15e-60 | 6 |
rhombic lip | 8.15e-60 | 6 |
regional part of metencephalon | 2.91e-40 | 9 |
metencephalon | 2.91e-40 | 9 |
future metencephalon | 2.91e-40 | 9 |
segmental subdivision of hindbrain | 1.81e-30 | 12 |
hindbrain | 1.81e-30 | 12 |
presumptive hindbrain | 1.81e-30 | 12 |
segmental subdivision of nervous system | 3.33e-28 | 13 |
posterior neural tube | 1.40e-24 | 15 |
chordal neural plate | 1.40e-24 | 15 |
uterine cervix | 7.25e-08 | 6 |
neck of organ | 7.25e-08 | 6 |
regional part of nervous system | 1.99e-07 | 53 |
regional part of brain | 1.99e-07 | 53 |
neural tube | 4.48e-07 | 56 |
neural rod | 4.48e-07 | 56 |
future spinal cord | 4.48e-07 | 56 |
neural keel | 4.48e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.49e-09 | 5 |