FFCP PHASE1:Hg19::chr8:101725067..101725135,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26986 | |EntrezGene=26986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8554 | |HGNC=8554 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-78bp_to_ENST00000517403_5end | |association_with_transcript=-78bp_to_ENST00000517403_5end | ||
|cluster_id=chr8:101725067..101725135,- | |||
|coexpression_cluster_id=C237 | |||
|description=CAGE_peak_18_at_PABPC1_5end | |description=CAGE_peak_18_at_PABPC1_5end | ||
|id=chr8:101725067..101725135,- | |id=chr8:101725067..101725135,- | ||
|ontology_enrichment_celltype=CL:0000037!3.59e-29!172;CL:0000566!3.59e-29!172;CL:0000988!1.54e-26!182;CL:0002032!8.02e-26!165;CL:0000837!8.02e-26!165;CL:0000738!1.47e-24!140;CL:0002087!1.35e-23!119;CL:0002031!7.59e-20!124;CL:0002057!2.42e-15!42;CL:0000763!2.55e-15!112;CL:0000049!2.55e-15!112;CL:0000860!9.44e-15!45;CL:0000766!2.06e-12!76;CL:0002009!2.42e-12!65;CL:0002194!4.79e-12!63;CL:0000576!4.79e-12!63;CL:0000040!4.79e-12!63;CL:0000559!4.79e-12!63;CL:0000557!7.33e-12!71;CL:0000839!2.79e-10!70;CL:0000542!3.27e-10!53;CL:0000051!3.27e-10!53;CL:0000838!8.97e-10!52 | |ontology_enrichment_celltype=CL:0000037!3.59e-29!172;CL:0000566!3.59e-29!172;CL:0000988!1.54e-26!182;CL:0002032!8.02e-26!165;CL:0000837!8.02e-26!165;CL:0000738!1.47e-24!140;CL:0002087!1.35e-23!119;CL:0002031!7.59e-20!124;CL:0002057!2.42e-15!42;CL:0000763!2.55e-15!112;CL:0000049!2.55e-15!112;CL:0000860!9.44e-15!45;CL:0000766!2.06e-12!76;CL:0002009!2.42e-12!65;CL:0002194!4.79e-12!63;CL:0000576!4.79e-12!63;CL:0000040!4.79e-12!63;CL:0000559!4.79e-12!63;CL:0000557!7.33e-12!71;CL:0000839!2.79e-10!70;CL:0000542!3.27e-10!53;CL:0000051!3.27e-10!53;CL:0000838!8.97e-10!52 | ||
|ontology_enrichment_celltype_v019=CL:0000084;9.48e-08;25!CL:0002087;6.66e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.13e-20,168;CL:0000988,2.61e-18,177;CL:0002032,1.14e-17,161;CL:0000837,1.14e-17,161;CL:0002087,1.28e-17,115;CL:0000738,1.70e-16,136;CL:0002031,3.32e-13,120;CL:0000542,2.91e-11,53;CL:0000051,2.91e-11,53;CL:0000838,1.72e-10,52;CL:0000860,1.21e-08,42;CL:0002057,1.21e-08,42;CL:0000763,7.57e-08,108;CL:0000049,7.57e-08,108;CL:0000084,1.03e-07,25;CL:0000827,1.03e-07,25;CL:0000473,5.65e-07,48;CL:0000234,5.65e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.06e-27!235;DOID:14566!9.78e-27!239;DOID:0050687!1.86e-19!143;DOID:0050686!6.17e-18!137;DOID:305!2.59e-12!106;DOID:2531!6.47e-10!51;DOID:0060083!6.47e-10!51;DOID:1240!8.98e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.75e-13,235;DOID:14566,1.63e-12,239;DOID:0050686,1.07e-09,137;DOID:1240,3.25e-08,39;DOID:0050687,5.21e-08,143;DOID:2531,4.48e-07,51;DOID:0060083,4.48e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.43e-09!80;UBERON:0001474!4.39e-09!86;UBERON:0002390!1.85e-08!102;UBERON:0003061!1.85e-08!102 | |ontology_enrichment_uberon=UBERON:0002371!2.43e-09!80;UBERON:0001474!4.39e-09!86;UBERON:0002390!1.85e-08!102;UBERON:0003061!1.85e-08!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0.157421562627358,0.786728553697808,2.68680578668049,0.77408061658038,0,0.30120591877825,0,0.852139206383318,2.41687695228617,0.880801318004542,12.1878989877013,7.82123345133553,14.9737500793938,0.223915474239924,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0.464858073811369,1.6446715520873,2.16794459626573,1.1507695692886,0.512321413058201,0.47296445977717,0.689491361473237,0.645484683583826,1.35426486594342,0.376484679085209,0.545812300115692,0.449446968890169,1.53041946185451,1.60464513538047,1.27867425159808,0.659702600373432,1.79517291859469,1.27867425159808,1.16083695451434,0.56738522469114,1.86846674698672,3.01498398308092,2.60741459210101,0.217188844705117,2.42159801053347,0.736555271975129,0.949387162322653,0.211255286311942,0.425208599930087,1.88692780957538,0.673971786878971,1.05123824989054,0.803627933485401,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0.954053754535364,5.12291672198504,7.04684627245127,6.49864487812889,0,0,0.263384084775077,6.49142241375649,7.07419372948497,18.7097364089553,0,0.651844533267181,0.946895611469467,0,0,2.65145316727353,0.221533894583621,0.812411591295047,0.512365278902701,0.130059347559878,0.328875809207352,0.276350017785848,0,1.92772532110679,1.60524496853828,2.09071047609954,0.226618685395132,0.383220493601921,0.68725489096526,1.77113784413652,0.318565414324097,0,0,0,0,0,0.473554504088034,0,4.43534835094411,5.34880391567015,10.1377082717959,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.26591592103773,4.5313218618015,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,5.29755719297581,0.122988438543114,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0.621984346622316,1.00883967391873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0,0.410952645100767,0,3.6988097517864,3.15249216323084,4.9594342217689,7.57223914050515,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,2.48121631347465,4.74571241800957,4.69601254335155,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,1.92495971052672,0.980160863924127,1.67222857613147,1.15415370381156,1.77854608371035,1.11598390910176,0.997896857164083,0,1.90506224451495,1.29848776109822,0.280797178113459,5.02116293873023,0,75.1903431270201,1.35433422241283,0.481764225311099,0.201799707191048,2.98092366383228,1.03051603426729,0,0.223676107892416,0.333698283423817,0.390776190804081,0.278406173895242,1.23087398947712,0.540911356951966,0,0,0.748562161632879,0.146508179271894,0,0.445773537109913,0.284136146806413,0.23874448473769,0,0.921482106297696,0,0,0.445234820091624,0.329607748453519,17.1011580583675,0.398495976502139,0.828851746593443,1.25966373927138,0.306806047506464,0.369254416383208,0,0.539210106883961,1.61119057208048,0.511572370226872,0.295930216910801,0,0,0.969332746095218,0,0,1.82299432759663,0.349839999984783,0,0.1137934482855,0.508507300585533,0.236387681767936,2.06846023944879,3.2076507472158,0,0,0.241192877250816,1.52581736317083,0.221158519862449,0,0.658156191461918,0,1.11538995422883,0.230850775511391,0.113942055847001,1.1528195219403,0.179515288819544,0.108647371922008,1.27600463892768,0,0,3.06579894587209,1.09886179476517,0.831058409500782,0,0.392125068635479,0,1.70778359451767,0.794682894901893,0.421996129056054,1.30586246527318,0.282706142867882,0,0,0.353830258013357,1.22206028986725,0.296521128680622,0.370691816839509,0.104421949505455,0.067401132980677,0.802577647298789,0,0.364909578431332,0.5869938567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| ||
|short_description=p18@PABPC1 | |short_description=p18@PABPC1 | ||
}} | }} |
Latest revision as of 20:08, 24 September 2015
Short description: | p18@PABPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PABPC1_5end |
Coexpression cluster: | C237_acute_breast_testicular_hepatoblastoma_chronic_argyrophil_Bronchial |
Association with transcript: | -78bp_to_ENST00000517403_5end |
EntrezGene: | PABPC1 |
HGNC: | 8554 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.13e-20 | 168 |
hematopoietic cell | 2.61e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.14e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-17 | 161 |
nongranular leukocyte | 1.28e-17 | 115 |
leukocyte | 1.70e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 3.32e-13 | 120 |
lymphocyte | 2.91e-11 | 53 |
common lymphoid progenitor | 2.91e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.72e-10 | 52 |
classical monocyte | 1.21e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-08 | 42 |
myeloid cell | 7.57e-08 | 108 |
common myeloid progenitor | 7.57e-08 | 108 |
T cell | 1.03e-07 | 25 |
pro-T cell | 1.03e-07 | 25 |
defensive cell | 5.65e-07 | 48 |
phagocyte | 5.65e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.75e-13 | 235 |
disease of cellular proliferation | 1.63e-12 | 239 |
organ system cancer | 1.07e-09 | 137 |
leukemia | 3.25e-08 | 39 |
cell type cancer | 5.21e-08 | 143 |
hematologic cancer | 4.48e-07 | 51 |
immune system cancer | 4.48e-07 | 51 |