FFCP PHASE1:Hg19::chr8:144660485..144660521,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93100 | |EntrezGene=93100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30450 | |HGNC=30450 | ||
|TSSclassifier=strong | |||
|UniProt=C9JC60,G5E977,C9J8U2,Q6XQN6 | |UniProt=C9JC60,G5E977,C9J8U2,Q6XQN6 | ||
|association_with_transcript=0bp_to_ENST00000276844,ENST00000340490,ENST00000426292,ENST00000435154,ENST00000462059,NM_145201,uc003yym.3,uc003yyn.3,uc003yyo.3,uc011lkh.1_5end | |association_with_transcript=0bp_to_ENST00000276844,ENST00000340490,ENST00000426292,ENST00000435154,ENST00000462059,NM_145201,uc003yym.3,uc003yyn.3,uc003yyo.3,uc011lkh.1_5end | ||
|cluster_id=chr8:144660485..144660521,- | |||
|description=CAGE_peak_1_at_NAPRT1_5end | |description=CAGE_peak_1_at_NAPRT1_5end | ||
|id=chr8:144660485..144660521,- | |id=chr8:144660485..144660521,- | ||
|ontology_enrichment_celltype=CL:0000763!3.12e-15!112;CL:0000049!3.12e-15!112;CL:0000766!2.10e-12!76;CL:0000839!8.10e-11!70;CL:0000557!3.72e-10!71;CL:0000037!7.23e-10!172;CL:0000566!7.23e-10!172;CL:0002194!9.25e-10!63;CL:0000576!9.25e-10!63;CL:0000040!9.25e-10!63;CL:0000559!9.25e-10!63;CL:0000988!1.08e-09!182;CL:0002009!2.16e-09!65;CL:0002032!3.39e-08!165;CL:0000837!3.39e-08!165;CL:0000860!3.74e-08!45;CL:0002057!1.39e-07!42 | |ontology_enrichment_celltype=CL:0000763!3.12e-15!112;CL:0000049!3.12e-15!112;CL:0000766!2.10e-12!76;CL:0000839!8.10e-11!70;CL:0000557!3.72e-10!71;CL:0000037!7.23e-10!172;CL:0000566!7.23e-10!172;CL:0002194!9.25e-10!63;CL:0000576!9.25e-10!63;CL:0000040!9.25e-10!63;CL:0000559!9.25e-10!63;CL:0000988!1.08e-09!182;CL:0002009!2.16e-09!65;CL:0002032!3.39e-08!165;CL:0000837!3.39e-08!165;CL:0000860!3.74e-08!45;CL:0002057!1.39e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.58e-15,108;CL:0000049,7.58e-15,108;CL:0000766,5.32e-12,72;CL:0000839,2.05e-10,66;CL:0000557,9.48e-10,67;CL:0000037,1.77e-09,168;CL:0002194,2.39e-09,59;CL:0000576,2.39e-09,59;CL:0000040,2.39e-09,59;CL:0000559,2.39e-09,59;CL:0000988,2.95e-09,177;CL:0002009,5.63e-09,61;CL:0000473,2.26e-08,48;CL:0000234,2.26e-08,48;CL:0002032,7.84e-08,161;CL:0000837,7.84e-08,161;CL:0000860,1.37e-07,42;CL:0002057,1.37e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.93e-09!102;UBERON:0003061!2.93e-09!102;UBERON:0002193!4.67e-09!112;UBERON:0002371!6.37e-09!80;UBERON:0001474!3.32e-08!86;UBERON:0002405!3.94e-07!115;UBERON:0004119!4.71e-07!169;UBERON:0000925!4.71e-07!169;UBERON:0006595!4.71e-07!169 | |ontology_enrichment_uberon=UBERON:0002390!2.93e-09!102;UBERON:0003061!2.93e-09!102;UBERON:0002193!4.67e-09!112;UBERON:0002371!6.37e-09!80;UBERON:0001474!3.32e-08!86;UBERON:0002405!3.94e-07!115;UBERON:0004119!4.71e-07!169;UBERON:0000925!4.71e-07!169;UBERON:0006595!4.71e-07!169 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.25e-09,98;UBERON:0003061,7.25e-09,98;UBERON:0002193,1.15e-08,108;UBERON:0002371,1.60e-08,76;UBERON:0001474,8.88e-08,82;UBERON:0002405,2.61e-07,93;UBERON:0004119,7.16e-07,160;UBERON:0000925,7.16e-07,160;UBERON:0006595,7.16e-07,160 | |||
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| ||
|short_description=p1@NAPRT1 | |short_description=p1@NAPRT1 | ||
}} | }} |
Latest revision as of 22:36, 16 September 2015
Short description: | p1@NAPRT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAPRT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000276844, ENST00000340490, ENST00000426292, ENST00000435154, ENST00000462059, NM_145201, uc003yym.3, uc003yyn.3, uc003yyo.3, uc011lkh.1_5end |
EntrezGene: | NAPRT1 |
HGNC: | 30450 |
UniProt: | C9JC60G5E977C9J8U2Q6XQN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.58e-15 | 108 |
common myeloid progenitor | 7.58e-15 | 108 |
myeloid leukocyte | 5.32e-12 | 72 |
myeloid lineage restricted progenitor cell | 2.05e-10 | 66 |
granulocyte monocyte progenitor cell | 9.48e-10 | 67 |
hematopoietic stem cell | 1.77e-09 | 168 |
monopoietic cell | 2.39e-09 | 59 |
monocyte | 2.39e-09 | 59 |
monoblast | 2.39e-09 | 59 |
promonocyte | 2.39e-09 | 59 |
hematopoietic cell | 2.95e-09 | 177 |
macrophage dendritic cell progenitor | 5.63e-09 | 61 |
defensive cell | 2.26e-08 | 48 |
phagocyte | 2.26e-08 | 48 |
hematopoietic oligopotent progenitor cell | 7.84e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.84e-08 | 161 |
classical monocyte | 1.37e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.25e-09 | 98 |
blood island | 7.25e-09 | 98 |
hemolymphoid system | 1.15e-08 | 108 |
bone marrow | 1.60e-08 | 76 |
bone element | 8.88e-08 | 82 |
immune system | 2.61e-07 | 93 |
endoderm-derived structure | 7.16e-07 | 160 |
endoderm | 7.16e-07 | 160 |
presumptive endoderm | 7.16e-07 | 160 |