FFCP PHASE1:Hg19::chr3:5884302..5884308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:5884302..5884308,+ | |||
|description=CAGE_peak_at_chr3:5884302..5884308,+ | |description=CAGE_peak_at_chr3:5884302..5884308,+ | ||
|id=chr3:5884302..5884308,+ | |id=chr3:5884302..5884308,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;3.96e-66;3!CL:0002251;5.85e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.35e-66,3;CL:0002251,5.70e-11,20 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.12e-50;1!UBERON:0003056;1.03e-17;3 | |||
|ontology_enrichment_disease=DOID:3493!1.23e-07!2 | |ontology_enrichment_disease=DOID:3493!1.23e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.21e-98;2!DOID:299;1.05e-18;25!DOID:3119;3.53e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.38e-99,2;DOID:299,1.02e-18,25;DOID:3119,3.41e-15,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.12e-50;1!UBERON:0001785;5.12e-50;1!UBERON:0002464;5.12e-50;1!UBERON:0004904;5.12e-50;1!UBERON:0001021;5.12e-50;1!UBERON:0000945;3.00e-40;5!UBERON:0010039;3.00e-40;5!UBERON:0003714;8.10e-26;2!UBERON:0005162;8.10e-26;2!UBERON:0000122;8.10e-26;2!UBERON:0001041;3.53e-15;14!UBERON:0005409;1.14e-09;22!UBERON:0000010;8.61e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.58e-50,1;UBERON:0001785,6.58e-50,1;UBERON:0002464,6.58e-50,1;UBERON:0004904,6.58e-50,1;UBERON:0001021,6.58e-50,1;UBERON:0003902,6.58e-50,1;UBERON:0005425,6.58e-50,1;UBERON:0003714,9.18e-26,2;UBERON:0005162,9.18e-26,2;UBERON:0000122,9.18e-26,2;UBERON:0000945,1.11e-25,8;UBERON:0010039,1.11e-25,8;UBERON:0001781,1.29e-13,4;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6;UBERON:0005409,1.11e-08,25;UBERON:0000010,8.85e-07,8 | |||
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| ||
|short_description=p@chr3:5884302..5884308,+ | |short_description=p@chr3:5884302..5884308,+ | ||
}} | }} |
Latest revision as of 23:00, 29 July 2015
Short description: | p@chr3:5884302..5884308, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:5884302..5884308, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.35e-66 | 3 |
epithelial cell of alimentary canal | 5.70e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.58e-50 | 1 |
cranial nerve | 6.58e-50 | 1 |
nerve trunk | 6.58e-50 | 1 |
nerve connecting eye with brain | 6.58e-50 | 1 |
nerve | 6.58e-50 | 1 |
retinal neural layer | 6.58e-50 | 1 |
presumptive neural retina | 6.58e-50 | 1 |
neural tissue | 9.18e-26 | 2 |
multi cell component structure | 9.18e-26 | 2 |
neuron projection bundle | 9.18e-26 | 2 |
stomach | 1.11e-25 | 8 |
food storage organ | 1.11e-25 | 8 |
layer of retina | 1.29e-13 | 4 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
gastrointestinal system | 1.11e-08 | 25 |
peripheral nervous system | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.38e-99 | 2 |
adenocarcinoma | 1.02e-18 | 25 |
gastrointestinal system cancer | 3.41e-15 | 14 |