FFCP PHASE1:Hg19::chr8:59572469..59572484,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8439 | |EntrezGene=8439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |HGNC=8017 | ||
|TSSclassifier=strong | |||
|UniProt=Q92636 | |UniProt=Q92636 | ||
|association_with_transcript=-65bp_to_NM_003580,uc003xtt.2,uc003xtu.2_5end | |association_with_transcript=-65bp_to_NM_003580,uc003xtt.2,uc003xtu.2_5end | ||
|cluster_id=chr8:59572469..59572484,- | |||
|description=CAGE_peak_16_at_NSMAF_5end | |description=CAGE_peak_16_at_NSMAF_5end | ||
|id=chr8:59572469..59572484,- | |id=chr8:59572469..59572484,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.17e-15;7!CL:0000586;1.17e-15;7!CL:0002032;3.79e-08;1!CL:0000557;3.79e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.11e-15,7;CL:0000586,1.11e-15,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.31e-11;10!UBERON:0005564;5.31e-11;10!UBERON:0010227;9.69e-08;1 | |||
|ontology_enrichment_disease=DOID:162!2.60e-11!235;DOID:14566!6.22e-11!239;DOID:8692!1.35e-09!31;DOID:1240!1.92e-09!39;DOID:2531!2.52e-09!51;DOID:0060083!2.52e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.44e-10;22!DOID:2994;2.44e-10;22!DOID:8692;4.68e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.60e-10,22;DOID:2994,2.60e-10,22;DOID:8692,6.17e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.02e-13;8!UBERON:0003135;5.20e-10;11!UBERON:0000922;9.42e-08;49!UBERON:0002079;9.69e-08;1!UBERON:0002135;9.69e-08;1!UBERON:0002426;9.69e-08;1!UBERON:0003831;9.69e-08;1!UBERON:0003898;9.69e-08;1!UBERON:0004830;9.69e-08;1!UBERON:0003830;9.69e-08;1!UBERON:0005175;9.69e-08;1!UBERON:0001774;9.69e-08;1!UBERON:0001103;9.69e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.71e-14,8;UBERON:0003135,5.04e-10,11;UBERON:0002426,6.52e-08,1;UBERON:0003831,6.52e-08,1;UBERON:0003898,6.52e-08,1;UBERON:0004830,6.52e-08,1;UBERON:0003830,6.52e-08,1;UBERON:0005175,6.52e-08,1;UBERON:0001774,6.52e-08,1;UBERON:0001103,6.52e-08,1;UBERON:0010084,6.52e-08,1;UBERON:0002079,7.45e-08,1;UBERON:0002135,1.64e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,2.00146596706261,0,0,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.85870796139317,0.136874425072884,0.627713197974014,0,0.246301768349837,0,0,0.767658796194425,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0.426507697462265,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0.449446968890169,0.306083892370903,0,0,0.989553900560148,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.318565414324097,0.651083453856419,0.950452044448374,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.283604451492204,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0.516628905878827,0,0.989067717114227,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0,0,0.423863802319124,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0.609868530647977,0.530119073285941,0.464775771478074,0.621966330092223,0.756962552626885,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.55146986366197,0,0.237270619111097,0,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0.531876233169741,0,0,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0.560425719967636,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0.206768026122887,0,0.320182673410333,0,0,0,0.496215615637554,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0.325378394664303,0,0.27470839445503,0.165018999841176,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0.322260734604821,0.145016693914229,0.426133137080504,0.267096106940212,0.165284915360978,0.192190067365106,0.127612712494584,0.30347334256665,0.464845549297286,0.31481234683064,0,0,0,1.73986598415015,0,0,0,0,0.38126038784765,0,1.71175595213568,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.711418433484141,0.637705090915289,0.997896857164083,0.191505370132367,0.211673582723883,0.973865820823666,0,1.14117339516596,0.156679895773023,0,0.169291777801603,0.1605880751037,0.80719882876419,0.425846237690326,0,1.22896305723383,1.78940886313933,1.00109485027145,0.976940477010201,0.278406173895242,3.69262196843137,0.540911356951966,0.99921590399346,0,0.561421621224659,0.293016358543788,1.09224469574562,0,0,0,0,0,0,0,0,0.329607748453519,0.422250816255987,0,0.276283915531148,0.251932747854276,0.511343412510774,0.123084805461069,0.311039587661807,0.179736702294654,0.179021174675609,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0.291604613383254,0.520874984799877,0,0.241192877250816,0,0.552896299656123,0.886642856860642,0.219385397153973,0.32681539055697,0.41827123283581,0.230850775511391,0.341826167541004,0.46112780877612,0.269272933229316,0.325942115766024,0,0,0.533034776018635,0,0.941881538370149,0.664846727600626,0.451191321234361,1.17637520590644,0.503464760927528,0.37950746544837,0.635746315921515,0,0,0.424059214301822,0.216388639742091,0,0.265372693510018,0,0.296521128680622,0.370691816839509,0.208843899010911,0.269604531922708,1.60515529459758,0.234264445725339,0.364909578431332,0.586993856796269,0.485560759068186,0,0,0.61214552326098,0.126373159256976,0.150323419414493,0,0.664653872707185,0,0.313932918407225,1.19472429772959,0,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| ||
|short_description=p16@NSMAF | |short_description=p16@NSMAF | ||
}} | }} |
Latest revision as of 15:49, 18 September 2015
Short description: | p16@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NSMAF_5end |
Coexpression cluster: | NA |
Association with transcript: | -65bp_to_NM_003580, uc003xtt.2, uc003xtu.2_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | Q92636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.11e-15 | 7 |
germ cell | 1.11e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 9.71e-14 | 8 |
male reproductive organ | 5.04e-10 | 11 |
chest muscle | 6.52e-08 | 1 |
respiratory system muscle | 6.52e-08 | 1 |
skeletal muscle of trunk | 6.52e-08 | 1 |
respiratory system skeletal muscle | 6.52e-08 | 1 |
thoracic segment muscle | 6.52e-08 | 1 |
chest organ | 6.52e-08 | 1 |
muscle of trunk | 6.52e-08 | 1 |
diaphragm | 6.52e-08 | 1 |
future diaphragm | 6.52e-08 | 1 |
left cardiac atrium | 7.45e-08 | 1 |
mitral valve | 1.64e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.60e-10 | 22 |
germ cell cancer | 2.60e-10 | 22 |
myeloid leukemia | 6.17e-07 | 31 |