FFCP PHASE1:Hg19::chr15:93447783..93447818,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:93447783..93447818,+
|short_description=p3@CHD2
|description=CAGE_peak_3_at_CHD2_5end
|association_with_transcript=80bp_to_ENST00000536619,uc010urb.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1106 | |EntrezGene=1106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1917 | |HGNC=1917 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z3I4 | |UniProt=B7Z3I4 | ||
|association_with_transcript=80bp_to_ENST00000536619,uc010urb.1_5end | |||
|cluster_id=chr15:93447783..93447818,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_CHD2_5end | |||
|id=chr15:93447783..93447818,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.29e-31!140;CL:0002057!5.14e-26!42;CL:0000037!7.17e-24!172;CL:0000566!7.17e-24!172;CL:0000860!1.33e-23!45;CL:0000988!2.56e-23!182;CL:0002031!2.75e-22!124;CL:0002032!1.74e-21!165;CL:0000837!1.74e-21!165;CL:0002087!3.43e-21!119;CL:0000766!3.81e-21!76;CL:0000557!1.20e-16!71;CL:0000839!1.92e-15!70;CL:0002009!2.86e-15!65;CL:0000763!5.44e-15!112;CL:0000049!5.44e-15!112;CL:0002194!3.09e-14!63;CL:0000576!3.09e-14!63;CL:0000040!3.09e-14!63;CL:0000559!3.09e-14!63;CL:0000134!3.48e-09!358;CL:0002320!1.05e-08!365;CL:0000219!2.54e-07!390;CL:0000094!7.42e-07!8;CL:0000048!9.47e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.16e-23;33!CL:0002057;9.16e-23;33!CL:0000576;6.75e-18;48!CL:0000473;3.64e-15;39!CL:0000234;3.64e-15;39!CL:0000766;1.30e-14;69!CL:0002087;3.76e-10;104!CL:0000738;4.84e-09;136!CL:0000094;5.24e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.19e-38,136;CL:0000860,4.93e-31,42;CL:0002057,4.93e-31,42;CL:0000037,2.55e-29,168;CL:0000766,1.03e-28,72;CL:0002031,7.20e-28,120;CL:0000988,8.64e-28,177;CL:0002032,2.00e-26,161;CL:0000837,2.00e-26,161;CL:0002087,2.93e-26,115;CL:0000473,1.17e-25,48;CL:0000234,1.17e-25,48;CL:0000557,2.56e-23,67;CL:0000839,2.98e-21,66;CL:0002009,3.17e-21,61;CL:0000763,5.69e-20,108;CL:0000049,5.69e-20,108;CL:0002194,6.83e-20,59;CL:0000576,6.83e-20,59;CL:0000040,6.83e-20,59;CL:0000559,6.83e-20,59;CL:0000134,6.38e-12,354;CL:0002320,1.09e-10,361;CL:0000048,1.17e-08,427;CL:0000219,2.37e-08,386;CL:0000094,6.06e-08,8;CL:0000034,6.63e-08,441;CL:0000723,7.85e-08,433;CL:0002393,1.07e-07,9;CL:0002397,1.07e-07,9;CL:0000838,6.89e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.63e-20!102;UBERON:0003061!1.63e-20!102;UBERON:0002193!3.13e-19!112;UBERON:0002371!1.40e-16!80;UBERON:0001474!9.42e-15!86;UBERON:0002405!5.82e-11!115;UBERON:0003081!2.76e-10!216;UBERON:0004765!8.89e-10!101;UBERON:0001434!8.89e-10!101;UBERON:0002384!4.58e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.91e-08;15!UBERON:0000179;8.91e-08;15!UBERON:0000463;8.91e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.40e-27,98;UBERON:0003061,1.40e-27,98;UBERON:0002193,4.71e-25,108;UBERON:0002371,3.88e-23,76;UBERON:0001474,8.83e-21,82;UBERON:0002405,7.72e-19,93;UBERON:0003081,3.90e-18,203;UBERON:0004765,1.69e-16,90;UBERON:0001434,6.93e-13,100;UBERON:0002384,1.24e-09,371;UBERON:0000178,1.11e-07,15;UBERON:0000179,1.11e-07,15;UBERON:0000463,1.11e-07,15 | |||
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| ||
|short_description=p3@CHD2 | |||
}} | }} |
Latest revision as of 23:26, 19 September 2015
Short description: | p3@CHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 80bp_to_ENST00000536619, uc010urb.1_5end |
EntrezGene: | CHD2 |
HGNC: | 1917 |
UniProt: | B7Z3I4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.40e-27 | 98 |
blood island | 1.40e-27 | 98 |
hemolymphoid system | 4.71e-25 | 108 |
bone marrow | 3.88e-23 | 76 |
bone element | 8.83e-21 | 82 |
immune system | 7.72e-19 | 93 |
lateral plate mesoderm | 3.90e-18 | 203 |
skeletal element | 1.69e-16 | 90 |
skeletal system | 6.93e-13 | 100 |
connective tissue | 1.24e-09 | 371 |
blood | 1.11e-07 | 15 |
haemolymphatic fluid | 1.11e-07 | 15 |
organism substance | 1.11e-07 | 15 |