FFCP PHASE1:Hg19::chr6:108145786..108145811,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256380 | |EntrezGene=256380 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21397 | |HGNC=21397 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N228 | |UniProt=Q8N228 | ||
|association_with_transcript=-265bp_to_ENST00000369022,NM_198081,uc003prz.3,uc010kdf.2,uc011eam.1_5end | |association_with_transcript=-265bp_to_ENST00000369022,NM_198081,uc003prz.3,uc010kdf.2,uc011eam.1_5end | ||
|cluster_id=chr6:108145786..108145811,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_2_at_SCML4_5end | |description=CAGE_peak_2_at_SCML4_5end | ||
|id=chr6:108145786..108145811,- | |id=chr6:108145786..108145811,- | ||
|ontology_enrichment_celltype=CL:0000738!7.61e-21!140;CL:0002087!1.29e-16!119;CL:0000037!3.36e-16!172;CL:0000566!3.36e-16!172;CL:0000791!8.55e-15!18;CL:0000789!8.55e-15!18;CL:0002420!8.55e-15!18;CL:0002419!8.55e-15!18;CL:0000790!8.55e-15!18;CL:0000988!1.49e-14!182;CL:0002032!1.06e-13!165;CL:0000837!1.06e-13!165;CL:0002031!2.62e-13!124;CL:0000624!6.10e-13!6;CL:0000094!1.08e-12!8;CL:0000838!1.59e-12!52;CL:0000542!3.56e-12!53;CL:0000051!3.56e-12!53;CL:0000084!9.34e-10!25;CL:0000827!9.34e-10!25;CL:0002393!1.23e-09!9;CL:0002397!1.23e-09!9;CL:0000081!7.45e-09!11;CL:0000766!8.42e-09!76;CL:0002057!1.96e-08!42;CL:0000623!6.85e-08!3;CL:0000825!6.85e-08!3;CL:0000860!1.32e-07!45;CL:0000767!2.88e-07!3;CL:0000842!5.09e-07!3;CL:0000898!7.01e-07!3 | |ontology_enrichment_celltype=CL:0000738!7.61e-21!140;CL:0002087!1.29e-16!119;CL:0000037!3.36e-16!172;CL:0000566!3.36e-16!172;CL:0000791!8.55e-15!18;CL:0000789!8.55e-15!18;CL:0002420!8.55e-15!18;CL:0002419!8.55e-15!18;CL:0000790!8.55e-15!18;CL:0000988!1.49e-14!182;CL:0002032!1.06e-13!165;CL:0000837!1.06e-13!165;CL:0002031!2.62e-13!124;CL:0000624!6.10e-13!6;CL:0000094!1.08e-12!8;CL:0000838!1.59e-12!52;CL:0000542!3.56e-12!53;CL:0000051!3.56e-12!53;CL:0000084!9.34e-10!25;CL:0000827!9.34e-10!25;CL:0002393!1.23e-09!9;CL:0002397!1.23e-09!9;CL:0000081!7.45e-09!11;CL:0000766!8.42e-09!76;CL:0002057!1.96e-08!42;CL:0000623!6.85e-08!3;CL:0000825!6.85e-08!3;CL:0000860!1.32e-07!45;CL:0000767!2.88e-07!3;CL:0000842!5.09e-07!3;CL:0000898!7.01e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;3.70e-27;8!CL:0000791;5.18e-20;18!CL:0000789;5.18e-20;18!CL:0002419;5.18e-20;18!CL:0000624;6.26e-20;6!CL:0000081;1.65e-19;11!CL:0000623;8.94e-16;3!CL:0000767;2.16e-14;3!CL:0000084;6.01e-14;25!CL:0000542;6.40e-11;53!CL:0000771;2.60e-10;2!CL:0002393;1.74e-07;6!CL:0002397;1.74e-07;6!CL:0000898;3.89e-07;3!CL:0000625;4.12e-07;11!CL:0000226;5.61e-07;3!CL:0000842;5.61e-07;3!CL:0000775;6.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.01e-27,8;CL:0000791,5.24e-20,18;CL:0000789,5.24e-20,18;CL:0002420,5.24e-20,18;CL:0002419,5.24e-20,18;CL:0000790,5.24e-20,18;CL:0000624,6.03e-20,6;CL:0000081,1.75e-19,11;CL:0000738,1.04e-18,136;CL:0000838,2.52e-17,52;CL:0000542,6.22e-17,53;CL:0000051,6.22e-17,53;CL:0000623,8.94e-16,3;CL:0000825,8.94e-16,3;CL:0000767,2.21e-14,3;CL:0000037,5.41e-14,168;CL:0000084,6.06e-14,25;CL:0000827,6.06e-14,25;CL:0000988,5.64e-13,177;CL:0002032,2.57e-12,161;CL:0000837,2.57e-12,161;CL:0002087,1.27e-11,115;CL:0000771,2.66e-10,2;CL:0002031,1.41e-08,120;CL:0000898,3.77e-07,3;CL:0000625,4.22e-07,11;CL:0000226,5.96e-07,3;CL:0000842,5.96e-07,3;CL:0000775,6.72e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.18e-20;18!CL:0000051;6.40e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.79e-09!15;UBERON:0000179!2.79e-09!15;UBERON:0000463!2.79e-09!15;UBERON:0002390!2.48e-08!102;UBERON:0003061!2.48e-08!102;UBERON:0002193!5.69e-07!112 | |ontology_enrichment_uberon=UBERON:0000178!2.79e-09!15;UBERON:0000179!2.79e-09!15;UBERON:0000463!2.79e-09!15;UBERON:0002390!2.48e-08!102;UBERON:0003061!2.48e-08!102;UBERON:0002193!5.69e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SCML4 | |short_description=p2@SCML4 | ||
}} | }} |
Latest revision as of 16:55, 19 September 2015
Short description: | p2@SCML4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCML4_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -265bp_to_ENST00000369022, NM_198081, uc003prz.3, uc010kdf.2, uc011eam.1_5end |
EntrezGene: | SCML4 |
HGNC: | 21397 |
UniProt: | Q8N228 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.01e-27 | 8 |
mature alpha-beta T cell | 5.24e-20 | 18 |
alpha-beta T cell | 5.24e-20 | 18 |
immature T cell | 5.24e-20 | 18 |
mature T cell | 5.24e-20 | 18 |
immature alpha-beta T cell | 5.24e-20 | 18 |
CD4-positive, alpha-beta T cell | 6.03e-20 | 6 |
blood cell | 1.75e-19 | 11 |
leukocyte | 1.04e-18 | 136 |
lymphoid lineage restricted progenitor cell | 2.52e-17 | 52 |
lymphocyte | 6.22e-17 | 53 |
common lymphoid progenitor | 6.22e-17 | 53 |
natural killer cell | 8.94e-16 | 3 |
pro-NK cell | 8.94e-16 | 3 |
basophil | 2.21e-14 | 3 |
hematopoietic stem cell | 5.41e-14 | 168 |
T cell | 6.06e-14 | 25 |
pro-T cell | 6.06e-14 | 25 |
hematopoietic cell | 5.64e-13 | 177 |
hematopoietic oligopotent progenitor cell | 2.57e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-12 | 161 |
nongranular leukocyte | 1.27e-11 | 115 |
eosinophil | 2.66e-10 | 2 |
hematopoietic lineage restricted progenitor cell | 1.41e-08 | 120 |
naive T cell | 3.77e-07 | 3 |
CD8-positive, alpha-beta T cell | 4.22e-07 | 11 |
single nucleate cell | 5.96e-07 | 3 |
mononuclear cell | 5.96e-07 | 3 |
neutrophil | 6.72e-07 | 3 |