FFCP PHASE1:Hg19::chr16:54963799..54963834,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:54963799..54963834,+
|short_description=p@chr16:54963799..54963834,+
|description=CAGE_peak_at_chr16:54963799..54963834,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:54963799..54963834,+ | |||
|description=CAGE_peak_at_chr16:54963799..54963834,+ | |||
|id=chr16:54963799..54963834,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.91e-16!42;CL:0000860!2.21e-14!45;CL:0000557!6.33e-09!71;CL:0002009!1.93e-08!65;CL:0000766!2.26e-08!76;CL:0000839!2.31e-08!70;CL:0002194!3.90e-08!63;CL:0000576!3.90e-08!63;CL:0000040!3.90e-08!63;CL:0000559!3.90e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.32e-35;33!CL:0002057;8.32e-35;33!CL:0000473;1.16e-22;39!CL:0000234;1.16e-22;39!CL:0000576;1.97e-19;48!CL:0000766;5.88e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.18e-31,42;CL:0002057,1.18e-31,42;CL:0000473,2.84e-27,48;CL:0000234,2.84e-27,48;CL:0002194,3.85e-21,59;CL:0000576,3.85e-21,59;CL:0000040,3.85e-21,59;CL:0000559,3.85e-21,59;CL:0002009,2.38e-20,61;CL:0000839,1.41e-18,66;CL:0000557,2.96e-18,67;CL:0000766,8.97e-17,72;CL:0000763,1.29e-11,108;CL:0000049,1.29e-11,108;CL:0002087,2.52e-09,115;CL:0002031,8.33e-09,120;CL:0000738,2.10e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-24;42!UBERON:0008425;1.50e-07;1!UBERON:0003099;2.67e-07;1!UBERON:0003852;2.67e-07;1!UBERON:0006242;6.12e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;6.27e-25;4!DOID:1612;6.27e-25;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.31e-25,4;DOID:1612,6.31e-25,4 | |||
|ontology_enrichment_uberon=UBERON:0001474!1.47e-09!86;UBERON:0002371!5.26e-09!80;UBERON:0004765!1.80e-07!101;UBERON:0001434!1.80e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;4.82e-10;10!UBERON:0001443;3.90e-09;11!UBERON:0002171;2.67e-07;1!UBERON:0005705;2.67e-07;1!UBERON:0008193;2.67e-07;1!UBERON:0010912;2.67e-07;1!UBERON:0006518;2.67e-07;1!UBERON:0008949;2.67e-07;1!UBERON:0002514;2.67e-07;1!UBERON:0003457;2.67e-07;1!UBERON:0008907;2.67e-07;1!UBERON:0008001;2.67e-07;1!UBERON:0007213;2.67e-07;1!UBERON:0009891;2.67e-07;1!UBERON:0007914;2.67e-07;1!UBERON:0007375;2.67e-07;1!UBERON:0003323;2.67e-07;1!UBERON:0010258;2.67e-07;1!UBERON:0000101;2.67e-07;1!UBERON:0005253;2.67e-07;1!UBERON:0007842;2.67e-07;1!UBERON:0002167;2.67e-07;1!UBERON:0002397;2.67e-07;1!UBERON:0003113;2.67e-07;1!UBERON:0003277;2.67e-07;1!UBERON:0001709;2.67e-07;1!UBERON:0002244;2.67e-07;1!UBERON:0005620;2.67e-07;1!UBERON:0010364;2.67e-07;1!UBERON:0004288;2.67e-07;1!UBERON:0007195;6.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.48e-18,82;UBERON:0002371,6.85e-18,76;UBERON:0004765,1.38e-16,90;UBERON:0001434,1.44e-14,100;UBERON:0002405,5.26e-14,93;UBERON:0002390,4.06e-13,98;UBERON:0003061,4.06e-13,98;UBERON:0002193,1.37e-11,108;UBERON:0000310,4.83e-10,10;UBERON:0001443,3.91e-09,11;UBERON:0002171,2.67e-07,1;UBERON:0006518,2.67e-07,1;UBERON:0008949,2.67e-07,1;UBERON:0000101,2.67e-07,1;UBERON:0002167,2.67e-07,1;UBERON:0002204,2.84e-07,167;UBERON:0005705,3.01e-07,1;UBERON:0008193,3.01e-07,1;UBERON:0010912,3.01e-07,1;UBERON:0002514,3.01e-07,1;UBERON:0003457,3.01e-07,1;UBERON:0008907,3.01e-07,1;UBERON:0008001,3.01e-07,1;UBERON:0007213,3.01e-07,1;UBERON:0009891,3.01e-07,1;UBERON:0007914,3.01e-07,1;UBERON:0009292,3.01e-07,1;UBERON:0003099,3.01e-07,1;UBERON:0007375,3.01e-07,1;UBERON:0003323,3.01e-07,1;UBERON:0010258,3.01e-07,1;UBERON:0007842,3.01e-07,1;UBERON:0009494,3.01e-07,1;UBERON:0010042,3.01e-07,1;UBERON:0010045,3.01e-07,1;UBERON:0010259,3.01e-07,1;UBERON:0010359,3.01e-07,1;UBERON:0009526,3.01e-07,1;UBERON:0002397,3.01e-07,1;UBERON:0003113,3.01e-07,1;UBERON:0003277,3.01e-07,1;UBERON:0001709,3.01e-07,1;UBERON:0004066,3.01e-07,1;UBERON:0002244,3.01e-07,1;UBERON:0005620,3.01e-07,1;UBERON:0004362,3.01e-07,1;UBERON:0010364,3.01e-07,1;UBERON:0010046,3.01e-07,1;UBERON:0005868,3.01e-07,1;UBERON:0007238,3.01e-07,1;UBERON:0004288,3.01e-07,1;UBERON:0004068,3.01e-07,1;UBERON:0010334,3.01e-07,1;UBERON:0003852,3.01e-07,1;UBERON:0010253,3.01e-07,1;UBERON:0007195,8.18e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0.30120591877825,1.10926203050036,0,0,0,1.10799081706375,0.401088894940283,0.434021741431704,0,0,0,0,0.755751887377619,0,0.697287110717054,2.05583944010913,1.23882548358041,2.8769239232215,3.58624989140741,2.12834006899727,1.37898272294647,0,1.35426486594342,0,1.09162460023138,0.224723484445085,0.918251677112708,1.28371610830437,2.55734850319616,0.329851300186716,1.79517291859469,0.426224750532694,0,0,0.622822248995575,2.51248665256743,5.21482918420201,1.3031330682307,1.81619850790011,0.368277635987565,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.110293972732394,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53143078571493,5.15091697256924,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0,0.126995788584338,0.381988425558278,0,1.71072446022705,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.644566922551274,0,0,0,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.576570202095319,1.02090169995667,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0.321176150207399,0,0,0,0,0,0.333698283423817,0,0,0,0,0,1.4098700508785,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0.398495976502139,0,0,0.102268682502155,0,0.622079175323615,0,0.179021174675609,0.511572370226872,0,0,1.11136990144637,0,0,0,8.33368835472746,8.1337799996462,0.724999575434793,0.227586896570999,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0.364909578431332,0.782658475728359,0,0,0,0,0.063186579628488,0.751617097072463,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0.277349346026277,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,1.06726497369676,0.19980960958213,0.72045208577053,0,0.343189995723929,0,0.124252535565433,0.471388069233591,0,0,0.305994652908965,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0.335434687599266,0,0.104909176269996,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0.171086837884329,0,0.320362237703084,0.157204305099666,2.48543433208317,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.705797459094515,0,0,0.149254802886874,0,0,0.947015026375446,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0.429642228169954,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0.279759015438889,0.622077260032973,0,0.107824811396682,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,1.7071847709395,0,0.860454717640555,0,0,0,0,1.86123831398592,0,0,0.098150233615243,0.975343399858155,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0,0,0,0.707029641304878,0,0,0.4226557275834,0,0,0,0,0.892769693028288,0,0.240724100067505,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0.202056159043763,0.573777643141411,1.3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| ||
|short_description=p@chr16:54963799..54963834,+ | |||
}} | }} |
Latest revision as of 09:49, 25 July 2015
Short description: | p@chr16:54963799..54963834, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:54963799..54963834, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.18e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-31 | 42 |
defensive cell | 2.84e-27 | 48 |
phagocyte | 2.84e-27 | 48 |
monopoietic cell | 3.85e-21 | 59 |
monocyte | 3.85e-21 | 59 |
monoblast | 3.85e-21 | 59 |
promonocyte | 3.85e-21 | 59 |
macrophage dendritic cell progenitor | 2.38e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.41e-18 | 66 |
granulocyte monocyte progenitor cell | 2.96e-18 | 67 |
myeloid leukocyte | 8.97e-17 | 72 |
myeloid cell | 1.29e-11 | 108 |
common myeloid progenitor | 1.29e-11 | 108 |
nongranular leukocyte | 2.52e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.33e-09 | 120 |
leukocyte | 2.10e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.31e-25 | 4 |
breast cancer | 6.31e-25 | 4 |