FFCP PHASE1:Hg19::chr7:67899920..67899958,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:67899920..67899958,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_at_chr7:67899920..67899958,- | |description=CAGE_peak_at_chr7:67899920..67899958,- | ||
|id=chr7:67899920..67899958,- | |id=chr7:67899920..67899958,- | ||
|ontology_enrichment_celltype=CL:0000746!1.89e-12!3;CL:0000513!1.89e-12!3;CL:0000737!1.46e-09!4 | |ontology_enrichment_celltype=CL:0000746!1.89e-12!3;CL:0000513!1.89e-12!3;CL:0000737!1.46e-09!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;7.82e-45;2!UBERON:0006222;2.10e-23;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;8.37e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002308!1.20e-61!9;UBERON:0000125!1.20e-61!9;UBERON:0009663!1.19e-45!7;UBERON:0000369!3.37e-36!4;UBERON:0002435!3.37e-36!4;UBERON:0000204!3.37e-36!4;UBERON:0010082!3.37e-36!4;UBERON:0002420!1.92e-35!9;UBERON:0007245!1.92e-35!9;UBERON:0010009!1.92e-35!9;UBERON:0010011!1.92e-35!9;UBERON:0000454!1.92e-35!9;UBERON:0005383!1.12e-27!3;UBERON:0005382!1.12e-27!3;UBERON:0001049!2.14e-23!57;UBERON:0005068!2.14e-23!57;UBERON:0006241!2.14e-23!57;UBERON:0007135!2.14e-23!57;UBERON:0002616!1.52e-22!59;UBERON:0002020!3.85e-19!34;UBERON:0003528!3.85e-19!34;UBERON:0001873!4.91e-19!2;UBERON:0010122!4.91e-19!2;UBERON:0001875!6.43e-19!2;UBERON:0006514!6.43e-19!2;UBERON:0000955!1.03e-18!69;UBERON:0006238!1.03e-18!69;UBERON:0002148!6.35e-18!2;UBERON:0009662!6.35e-18!2;UBERON:0003075!2.32e-17!86;UBERON:0007284!2.32e-17!86;UBERON:0002298!2.96e-17!8;UBERON:0005743!3.89e-17!86;UBERON:0007023!1.03e-16!115;UBERON:0002346!1.71e-16!90;UBERON:0002780!6.16e-16!41;UBERON:0001890!6.16e-16!41;UBERON:0006240!6.16e-16!41;UBERON:0003080!1.55e-15!42;UBERON:0001017!1.77e-15!82;UBERON:0000073!2.52e-15!94;UBERON:0001016!2.52e-15!94;UBERON:0000153!2.23e-14!129;UBERON:0007811!2.23e-14!129;UBERON:0003056!8.62e-13!61;UBERON:0001869!1.53e-12!32;UBERON:0001896!2.25e-12!3;UBERON:0005290!2.25e-12!3;UBERON:0010096!2.25e-12!3;UBERON:0000988!2.83e-12!3;UBERON:0006331!2.83e-12!3;UBERON:0002791!3.76e-12!33;UBERON:0001893!8.79e-12!34;UBERON:0004733!1.39e-11!12;UBERON:0002028!1.39e-11!12;UBERON:0007277!1.39e-11!12;UBERON:0000033!2.37e-11!123;UBERON:0004732!1.05e-10!13;UBERON:0001874!1.98e-10!1;UBERON:0001882!2.59e-10!1;UBERON:0005403!2.59e-10!1;UBERON:0002022!4.06e-10!1;UBERON:0002370!1.28e-09!4;UBERON:0005058!1.28e-09!4;UBERON:0009113!1.28e-09!4;UBERON:0003295!1.28e-09!4;UBERON:0005562!1.28e-09!4;UBERON:0003076!2.65e-09!15;UBERON:0003057!2.65e-09!15;UBERON:0000025!9.01e-09!194;UBERON:0004121!1.38e-07!169;UBERON:0000924!2.33e-07!173;UBERON:0006601!2.33e-07!173;UBERON:0000483!5.00e-07!309;UBERON:0000119!6.29e-07!312;UBERON:0000477!7.62e-07!286 | |ontology_enrichment_uberon=UBERON:0002308!1.20e-61!9;UBERON:0000125!1.20e-61!9;UBERON:0009663!1.19e-45!7;UBERON:0000369!3.37e-36!4;UBERON:0002435!3.37e-36!4;UBERON:0000204!3.37e-36!4;UBERON:0010082!3.37e-36!4;UBERON:0002420!1.92e-35!9;UBERON:0007245!1.92e-35!9;UBERON:0010009!1.92e-35!9;UBERON:0010011!1.92e-35!9;UBERON:0000454!1.92e-35!9;UBERON:0005383!1.12e-27!3;UBERON:0005382!1.12e-27!3;UBERON:0001049!2.14e-23!57;UBERON:0005068!2.14e-23!57;UBERON:0006241!2.14e-23!57;UBERON:0007135!2.14e-23!57;UBERON:0002616!1.52e-22!59;UBERON:0002020!3.85e-19!34;UBERON:0003528!3.85e-19!34;UBERON:0001873!4.91e-19!2;UBERON:0010122!4.91e-19!2;UBERON:0001875!6.43e-19!2;UBERON:0006514!6.43e-19!2;UBERON:0000955!1.03e-18!69;UBERON:0006238!1.03e-18!69;UBERON:0002148!6.35e-18!2;UBERON:0009662!6.35e-18!2;UBERON:0003075!2.32e-17!86;UBERON:0007284!2.32e-17!86;UBERON:0002298!2.96e-17!8;UBERON:0005743!3.89e-17!86;UBERON:0007023!1.03e-16!115;UBERON:0002346!1.71e-16!90;UBERON:0002780!6.16e-16!41;UBERON:0001890!6.16e-16!41;UBERON:0006240!6.16e-16!41;UBERON:0003080!1.55e-15!42;UBERON:0001017!1.77e-15!82;UBERON:0000073!2.52e-15!94;UBERON:0001016!2.52e-15!94;UBERON:0000153!2.23e-14!129;UBERON:0007811!2.23e-14!129;UBERON:0003056!8.62e-13!61;UBERON:0001869!1.53e-12!32;UBERON:0001896!2.25e-12!3;UBERON:0005290!2.25e-12!3;UBERON:0010096!2.25e-12!3;UBERON:0000988!2.83e-12!3;UBERON:0006331!2.83e-12!3;UBERON:0002791!3.76e-12!33;UBERON:0001893!8.79e-12!34;UBERON:0004733!1.39e-11!12;UBERON:0002028!1.39e-11!12;UBERON:0007277!1.39e-11!12;UBERON:0000033!2.37e-11!123;UBERON:0004732!1.05e-10!13;UBERON:0001874!1.98e-10!1;UBERON:0001882!2.59e-10!1;UBERON:0005403!2.59e-10!1;UBERON:0002022!4.06e-10!1;UBERON:0002370!1.28e-09!4;UBERON:0005058!1.28e-09!4;UBERON:0009113!1.28e-09!4;UBERON:0003295!1.28e-09!4;UBERON:0005562!1.28e-09!4;UBERON:0003076!2.65e-09!15;UBERON:0003057!2.65e-09!15;UBERON:0000025!9.01e-09!194;UBERON:0004121!1.38e-07!169;UBERON:0000924!2.33e-07!173;UBERON:0006601!2.33e-07!173;UBERON:0000483!5.00e-07!309;UBERON:0000119!6.29e-07!312;UBERON:0000477!7.62e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0009663;3.34e-112;7!UBERON:0000369;7.85e-88;4!UBERON:0002435;7.85e-88;4!UBERON:0000204;7.85e-88;4!UBERON:0002420;2.24e-87;9!UBERON:0000125;2.24e-87;9!UBERON:0007245;2.24e-87;9!UBERON:0002308;2.24e-87;9!UBERON:0010009;2.24e-87;9!UBERON:0010011;2.24e-87;9!UBERON:0000454;2.24e-87;9!UBERON:0005383;1.92e-66;3!UBERON:0005382;1.92e-66;3!UBERON:0001873;7.82e-45;2!UBERON:0001875;9.78e-45;2!UBERON:0006514;9.78e-45;2!UBERON:0002780;4.39e-27;41!UBERON:0001890;4.39e-27;41!UBERON:0002791;4.54e-24;32!UBERON:0001874;1.67e-23;1!UBERON:0001882;2.93e-23;1!UBERON:0005403;2.93e-23;1!UBERON:0001869;1.21e-22;32!UBERON:0003528;4.36e-21;34!UBERON:0002020;4.36e-21;34!UBERON:0001893;2.76e-20;34!UBERON:0000073;1.31e-15;53!UBERON:0002616;1.31e-15;53!UBERON:0000955;9.61e-14;68!UBERON:0001894;1.58e-13;7!UBERON:0001017;6.82e-13;75!UBERON:0001897;3.24e-12;2!UBERON:0010225;3.24e-12;2!UBERON:0001016;6.76e-10;83!UBERON:0002784;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,3.67e-112,7;UBERON:0000369,7.02e-88,4;UBERON:0002435,7.02e-88,4;UBERON:0000204,7.02e-88,4;UBERON:0010082,7.02e-88,4;UBERON:0002420,2.42e-87,9;UBERON:0000125,2.42e-87,9;UBERON:0007245,2.42e-87,9;UBERON:0002308,2.42e-87,9;UBERON:0010009,2.42e-87,9;UBERON:0010011,2.42e-87,9;UBERON:0000454,2.42e-87,9;UBERON:0005383,1.54e-66,3;UBERON:0005382,1.54e-66,3;UBERON:0001873,6.26e-45,2;UBERON:0010122,6.26e-45,2;UBERON:0001875,1.22e-44,2;UBERON:0006514,1.22e-44,2;UBERON:0002780,3.13e-33,41;UBERON:0001890,3.13e-33,41;UBERON:0003080,3.13e-33,41;UBERON:0006240,3.13e-33,41;UBERON:0000073,7.58e-26,53;UBERON:0002616,7.58e-26,53;UBERON:0001049,1.74e-24,56;UBERON:0005068,1.74e-24,56;UBERON:0006241,1.74e-24,56;UBERON:0007135,1.74e-24,56;UBERON:0002791,5.04e-24,32;UBERON:0001869,5.04e-24,32;UBERON:0001874,1.67e-23,1;UBERON:0001882,3.28e-23,1;UBERON:0005403,3.28e-23,1;UBERON:0003528,1.16e-22,34;UBERON:0002020,1.16e-22,34;UBERON:0001893,1.16e-22,34;UBERON:0003056,1.66e-22,61;UBERON:0000955,6.33e-20,68;UBERON:0006238,6.33e-20,68;UBERON:0001017,8.70e-17,81;UBERON:0003075,8.70e-17,82;UBERON:0007284,8.70e-17,82;UBERON:0002346,5.22e-16,86;UBERON:0001016,3.95e-15,89;UBERON:0001894,1.58e-13,7;UBERON:0006222,1.58e-13,7;UBERON:0010371,3.10e-13,104;UBERON:0001897,3.24e-12,2;UBERON:0010225,3.24e-12,2;UBERON:0007023,3.57e-12,114;UBERON:0010314,2.12e-10,132;UBERON:0000025,5.27e-09,192;UBERON:0004121,7.05e-08,171;UBERON:0000924,7.05e-08,171;UBERON:0006601,7.05e-08,171;UBERON:0011216,1.33e-07,223;UBERON:0004111,3.89e-07,240;UBERON:0002784,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4003794013937,1.32656082487949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74823113160543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,7.80546375322726,1.23214841002794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56916900385838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91308595630408,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71733118420012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,1.24119595034274,0,0,0.322944549180031,0.372448285775147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4003794013937,1.32656082487949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74823113160543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,7.80546375322726,1.23214841002794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56916900385838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91308595630408,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71733118420012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,1.24119595034274,0,0,0.322944549180031,0.372448285775147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:67899920..67899958,- | |short_description=p@chr7:67899920..67899958,- | ||
}} | }} |
Latest revision as of 11:16, 31 July 2015
Short description: | p@chr7:67899920..67899958, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:67899920..67899958, - |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.14e-07 | 4 |