FFCP PHASE1:Hg19::chr10:59999608..59999621,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:59999608..59999621,- | |||
|coexpression_cluster_id=C784 | |||
|description=CAGE_peak_at_chr10:59999608..59999621,- | |description=CAGE_peak_at_chr10:59999608..59999621,- | ||
|id=chr10:59999608..59999621,- | |id=chr10:59999608..59999621,- | ||
|ontology_enrichment_celltype=CL:0002139!1.26e-78!24;CL:0000115!2.76e-70!35;CL:0000071!1.17e-59!18;CL:0002546!1.17e-59!18;CL:0002078!8.39e-55!44;CL:0000213!4.56e-41!57;CL:0000215!4.56e-41!57;CL:1000413!2.84e-26!9;CL:0002543!2.47e-21!6;CL:0000222!2.29e-20!119;CL:0005020!3.21e-20!6;CL:0002138!3.21e-20!6;CL:0005022!3.21e-20!6;CL:0000076!4.94e-17!62;CL:0002618!2.20e-16!3;CL:0002144!7.69e-16!3;CL:0002544!8.77e-14!6;CL:0000220!2.80e-12!246;CL:0002321!3.97e-12!248;CL:0000666!5.50e-12!4;CL:0002188!5.50e-12!4;CL:0000066!8.37e-12!254;CL:1000612!1.27e-11!7;CL:1000746!1.27e-11!7 | |ontology_enrichment_celltype=CL:0002139!1.26e-78!24;CL:0000115!2.76e-70!35;CL:0000071!1.17e-59!18;CL:0002546!1.17e-59!18;CL:0002078!8.39e-55!44;CL:0000213!4.56e-41!57;CL:0000215!4.56e-41!57;CL:1000413!2.84e-26!9;CL:0002543!2.47e-21!6;CL:0000222!2.29e-20!119;CL:0005020!3.21e-20!6;CL:0002138!3.21e-20!6;CL:0005022!3.21e-20!6;CL:0000076!4.94e-17!62;CL:0002618!2.20e-16!3;CL:0002144!7.69e-16!3;CL:0002544!8.77e-14!6;CL:0000220!2.80e-12!246;CL:0002321!3.97e-12!248;CL:0000666!5.50e-12!4;CL:0002188!5.50e-12!4;CL:0000066!8.37e-12!254;CL:1000612!1.27e-11!7;CL:1000746!1.27e-11!7 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.52e-60;24!CL:0002618;4.57e-55;3!CL:0000115;2.50e-49;36!CL:0000071;1.09e-48;18!CL:0002078;2.23e-29;45!CL:0002543;5.65e-28;6!CL:0002544;1.61e-27;6!CL:0000213;5.26e-27;58!CL:0000215;5.26e-27;58!CL:1000413;1.32e-18;9!CL:0002188;3.12e-15;5!CL:0002138;5.10e-13;6!CL:1000746;3.66e-11;7!CL:1000612;3.66e-11;7!CL:0000076;7.02e-11;63!CL:0002545;2.99e-10;2!CL:0002144;2.40e-07;3!CL:0002681;6.94e-07;12!CL:0002584;6.94e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.85e-60,24;CL:0000115,1.45e-59,36;CL:0002618,3.47e-55,3;CL:0000071,1.02e-48,18;CL:0002546,1.02e-48,18;CL:0002078,1.38e-47,45;CL:0000213,7.82e-37,58;CL:0000215,7.82e-37,58;CL:0002543,4.92e-28,6;CL:0002544,1.61e-27,6;CL:1000413,1.32e-18,9;CL:0000222,2.20e-17,121;CL:0002188,2.90e-15,5;CL:0000076,8.67e-14,63;CL:0005020,5.76e-13,6;CL:0002138,5.76e-13,6;CL:0005022,5.76e-13,6;CL:1000746,3.48e-11,7;CL:1000612,3.48e-11,7;CL:0002545,2.72e-10,2;CL:0002321,5.72e-08,250;CL:0000066,6.20e-08,253;CL:0002144,2.47e-07,3;CL:0002681,6.74e-07,12;CL:0002584,6.74e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;1.09e-48;18!CL:0005022;5.10e-13;6!CL:0000222;7.27e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.17e-59!18;UBERON:0004638!1.17e-59!18;UBERON:0004852!1.17e-59!18;UBERON:0000487!3.49e-48!22;UBERON:0006914!5.50e-42!25;UBERON:0000055!1.46e-32!69;UBERON:0002049!9.29e-28!79;UBERON:0007798!9.29e-28!79;UBERON:0003915!2.84e-26!9;UBERON:0004700!2.84e-26!9;UBERON:0001917!2.84e-26!9;UBERON:0001981!1.27e-22!60;UBERON:0007500!1.27e-22!60;UBERON:0004537!1.27e-22!60;UBERON:0006965!1.27e-22!60;UBERON:0004535!3.09e-20!110;UBERON:0001009!1.49e-19!113;UBERON:0003914!7.89e-17!118;UBERON:0004872!8.45e-17!84;UBERON:0001915!7.69e-16!3;UBERON:0001982!7.69e-16!3;UBERON:0001473!4.12e-15!8;UBERON:0004536!4.12e-15!8;UBERON:0006558!4.12e-15!8;UBERON:0001638!3.92e-14!9;UBERON:0003920!3.92e-14!9;UBERON:0004582!3.92e-14!9;UBERON:0004111!1.01e-12!241;UBERON:0002465!4.86e-12!10;UBERON:0000074!1.27e-11!7;UBERON:0001229!1.27e-11!7;UBERON:0001230!1.27e-11!7;UBERON:0005749!1.27e-11!7;UBERON:0004199!1.27e-11!7;UBERON:0004209!1.27e-11!7;UBERON:0004198!1.27e-11!7;UBERON:0000477!1.72e-11!286;UBERON:0002066!5.21e-10!5;UBERON:0001637!1.02e-09!42;UBERON:0003509!1.02e-09!42;UBERON:0004572!1.02e-09!42;UBERON:0000490!1.23e-09!138;UBERON:0000025!3.80e-08!194;UBERON:0003081!1.27e-07!216 | |ontology_enrichment_uberon=UBERON:0001986!1.17e-59!18;UBERON:0004638!1.17e-59!18;UBERON:0004852!1.17e-59!18;UBERON:0000487!3.49e-48!22;UBERON:0006914!5.50e-42!25;UBERON:0000055!1.46e-32!69;UBERON:0002049!9.29e-28!79;UBERON:0007798!9.29e-28!79;UBERON:0003915!2.84e-26!9;UBERON:0004700!2.84e-26!9;UBERON:0001917!2.84e-26!9;UBERON:0001981!1.27e-22!60;UBERON:0007500!1.27e-22!60;UBERON:0004537!1.27e-22!60;UBERON:0006965!1.27e-22!60;UBERON:0004535!3.09e-20!110;UBERON:0001009!1.49e-19!113;UBERON:0003914!7.89e-17!118;UBERON:0004872!8.45e-17!84;UBERON:0001915!7.69e-16!3;UBERON:0001982!7.69e-16!3;UBERON:0001473!4.12e-15!8;UBERON:0004536!4.12e-15!8;UBERON:0006558!4.12e-15!8;UBERON:0001638!3.92e-14!9;UBERON:0003920!3.92e-14!9;UBERON:0004582!3.92e-14!9;UBERON:0004111!1.01e-12!241;UBERON:0002465!4.86e-12!10;UBERON:0000074!1.27e-11!7;UBERON:0001229!1.27e-11!7;UBERON:0001230!1.27e-11!7;UBERON:0005749!1.27e-11!7;UBERON:0004199!1.27e-11!7;UBERON:0004209!1.27e-11!7;UBERON:0004198!1.27e-11!7;UBERON:0000477!1.72e-11!286;UBERON:0002066!5.21e-10!5;UBERON:0001637!1.02e-09!42;UBERON:0003509!1.02e-09!42;UBERON:0004572!1.02e-09!42;UBERON:0000490!1.23e-09!138;UBERON:0000025!3.80e-08!194;UBERON:0003081!1.27e-07!216 | ||
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|short_description=p@chr10:59999608..59999621,- | |short_description=p@chr10:59999608..59999621,- | ||
}} | }} |
Latest revision as of 14:16, 23 July 2015
Short description: | p@chr10:59999608..59999621, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:59999608..59999621, - |
Coexpression cluster: | C784_Endothelial_Lymphatic_Renal_placenta_Hepatic_chronic_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.85e-60 | 24 |
endothelial cell | 1.45e-59 | 36 |
endothelial cell of umbilical vein | 3.47e-55 | 3 |
blood vessel endothelial cell | 1.02e-48 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.02e-48 | 18 |
meso-epithelial cell | 1.38e-47 | 45 |
lining cell | 7.82e-37 | 58 |
barrier cell | 7.82e-37 | 58 |
vein endothelial cell | 4.92e-28 | 6 |
aortic endothelial cell | 1.61e-27 | 6 |
endothelial cell of artery | 1.32e-18 | 9 |
mesodermal cell | 2.20e-17 | 121 |
glomerular endothelial cell | 2.90e-15 | 5 |
squamous epithelial cell | 8.67e-14 | 63 |
lymphangioblast | 5.76e-13 | 6 |
endothelial cell of lymphatic vessel | 5.76e-13 | 6 |
vascular lymphangioblast | 5.76e-13 | 6 |
glomerular cell | 3.48e-11 | 7 |
kidney corpuscule cell | 3.48e-11 | 7 |
thoracic aorta endothelial cell | 2.72e-10 | 2 |
embryonic cell | 5.72e-08 | 250 |
epithelial cell | 6.20e-08 | 253 |
capillary endothelial cell | 2.47e-07 | 3 |
kidney cortical cell | 6.74e-07 | 12 |
renal cortical epithelial cell | 6.74e-07 | 12 |