FFCP PHASE1:Hg19::chr16:80838479..80838508,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:80838479..80838508,-
|short_description=p1@CDYL2
|description=CAGE_peak_1_at_CDYL2_5end
|association_with_transcript=-304bp_to_ENST00000299564,NM_152342,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124359 | |EntrezGene=124359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23030 | |HGNC=23030 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N8U2 | |UniProt=Q8N8U2 | ||
|association_with_transcript=-304bp_to_ENST00000299564,NM_152342,uc002ffs.2_5end | |||
|cluster_id=chr16:80838479..80838508,- | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_1_at_CDYL2_5end | |||
|id=chr16:80838479..80838508,- | |||
|ontology_enrichment_celltype=CL:0000115!8.11e-15!35;CL:0002139!1.30e-13!24;CL:0002078!2.11e-12!44;CL:0000071!1.87e-11!18;CL:0002546!1.87e-11!18;CL:0000213!4.90e-10!57;CL:0000215!4.90e-10!57;CL:0000222!6.83e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.37e-14;24!CL:0000115;1.24e-13;36!CL:0000071;8.69e-12;18!CL:0002078;1.80e-08;45!CL:0000213;6.22e-07;58!CL:0000215;6.22e-07;58!CL:1000413;8.97e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.35e-15,36;CL:0002139,7.62e-14,24;CL:0002078,4.89e-13,45;CL:0000071,1.21e-11,18;CL:0002546,1.21e-11,18;CL:0000213,1.20e-10,58;CL:0000215,1.20e-10,58;CL:0000222,1.59e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;8.69e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!6.51e-12!286;UBERON:0001986!1.87e-11!18;UBERON:0004638!1.87e-11!18;UBERON:0004852!1.87e-11!18;UBERON:0000025!4.95e-11!194;UBERON:0000055!1.87e-10!69;UBERON:0002049!4.53e-10!79;UBERON:0007798!4.53e-10!79;UBERON:0004111!8.67e-10!241;UBERON:0004535!1.87e-09!110;UBERON:0001981!2.02e-09!60;UBERON:0007500!2.02e-09!60;UBERON:0004537!2.02e-09!60;UBERON:0006965!2.02e-09!60;UBERON:0000487!3.17e-09!22;UBERON:0001009!6.52e-09!113;UBERON:0003081!2.04e-08!216;UBERON:0001049!2.41e-08!57;UBERON:0005068!2.41e-08!57;UBERON:0006241!2.41e-08!57;UBERON:0007135!2.41e-08!57;UBERON:0000467!3.37e-08!625;UBERON:0007023!3.59e-08!115;UBERON:0000480!5.47e-08!626;UBERON:0000468!1.93e-07!659;UBERON:0002616!2.22e-07!59;UBERON:0006914!3.31e-07!25;UBERON:0004872!5.75e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.69e-12;18!UBERON:0001986;8.69e-12;18!UBERON:0004852;8.69e-12;18!UBERON:0000487;1.06e-09;22!UBERON:0006914;1.14e-07;25!UBERON:0000490;2.49e-07;33!UBERON:0003915;8.97e-07;9!UBERON:0004700;8.97e-07;9!UBERON:0001917;8.97e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.21e-11,18;UBERON:0001986,1.21e-11,18;UBERON:0004852,1.21e-11,18;UBERON:0000025,2.64e-11,192;UBERON:0004111,1.24e-09,240;UBERON:0000055,1.38e-09,68;UBERON:0000487,1.57e-09,22;UBERON:0002049,4.38e-09,78;UBERON:0007798,4.38e-09,78;UBERON:0007500,1.56e-08,59;UBERON:0001981,1.56e-08,59;UBERON:0004537,1.56e-08,59;UBERON:0006965,1.56e-08,59;UBERON:0004535,1.70e-08,109;UBERON:0001049,6.08e-08,56;UBERON:0005068,6.08e-08,56;UBERON:0006241,6.08e-08,56;UBERON:0007135,6.08e-08,56;UBERON:0001009,6.62e-08,112;UBERON:0006914,1.42e-07,25;UBERON:0007023,1.67e-07,114;UBERON:0000073,4.56e-07,53;UBERON:0002616,4.56e-07,53;UBERON:0003081,6.93e-07,203 | |||
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| ||
|short_description=p1@CDYL2 | |||
}} | }} |
Latest revision as of 00:21, 18 September 2015
Short description: | p1@CDYL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDYL2_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | -304bp_to_ENST00000299564, NM_152342, uc002ffs.2_5end |
EntrezGene: | CDYL2 |
HGNC: | 23030 |
UniProt: | Q8N8U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.35e-15 | 36 |
endothelial cell of vascular tree | 7.62e-14 | 24 |
meso-epithelial cell | 4.89e-13 | 45 |
blood vessel endothelial cell | 1.21e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.21e-11 | 18 |
lining cell | 1.20e-10 | 58 |
barrier cell | 1.20e-10 | 58 |
mesodermal cell | 1.59e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.21e-11 | 18 |
endothelium | 1.21e-11 | 18 |
cardiovascular system endothelium | 1.21e-11 | 18 |
tube | 2.64e-11 | 192 |
anatomical conduit | 1.24e-09 | 240 |
vessel | 1.38e-09 | 68 |
simple squamous epithelium | 1.57e-09 | 22 |
vasculature | 4.38e-09 | 78 |
vascular system | 4.38e-09 | 78 |
epithelial tube open at both ends | 1.56e-08 | 59 |
blood vessel | 1.56e-08 | 59 |
blood vasculature | 1.56e-08 | 59 |
vascular cord | 1.56e-08 | 59 |
cardiovascular system | 1.70e-08 | 109 |
neural tube | 6.08e-08 | 56 |
neural rod | 6.08e-08 | 56 |
future spinal cord | 6.08e-08 | 56 |
neural keel | 6.08e-08 | 56 |
circulatory system | 6.62e-08 | 112 |
squamous epithelium | 1.42e-07 | 25 |
adult organism | 1.67e-07 | 114 |
regional part of nervous system | 4.56e-07 | 53 |
regional part of brain | 4.56e-07 | 53 |
lateral plate mesoderm | 6.93e-07 | 203 |