FFCP PHASE1:Hg19::chr17:1496576..1496598,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:1496576..1496598,-
|short_description=p5@SLC43A2
|description=CAGE_peak_5_at_SLC43A2_5end
|association_with_transcript=-82bp_to_AK075196_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124935 | |EntrezGene=124935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23087 | |HGNC=23087 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBW0 | |UniProt=Q8NBW0 | ||
|association_with_transcript=-82bp_to_AK075196_5end | |||
|cluster_id=chr17:1496576..1496598,- | |||
|description=CAGE_peak_5_at_SLC43A2_5end | |||
|id=chr17:1496576..1496598,- | |||
|ontology_enrichment_celltype=CL:0002057!1.64e-65!42;CL:0000860!2.05e-60!45;CL:0002087!4.27e-49!119;CL:0000738!3.73e-45!140;CL:0002031!1.05e-42!124;CL:0002194!9.48e-42!63;CL:0000576!9.48e-42!63;CL:0000040!9.48e-42!63;CL:0000559!9.48e-42!63;CL:0002009!3.74e-40!65;CL:0000037!2.62e-38!172;CL:0000566!2.62e-38!172;CL:0000766!2.97e-37!76;CL:0000839!1.47e-36!70;CL:0000557!6.69e-36!71;CL:0002032!9.19e-36!165;CL:0000837!9.19e-36!165;CL:0000988!2.53e-35!182;CL:0000763!4.41e-26!112;CL:0000049!4.41e-26!112;CL:0002393!1.91e-16!9;CL:0002397!1.91e-16!9;CL:0000134!6.85e-13!358;CL:0002320!2.44e-12!365;CL:0000219!2.09e-10!390;CL:0000945!3.28e-10!24;CL:0000826!3.28e-10!24;CL:0000838!3.66e-09!52;CL:0000542!6.52e-09!53;CL:0000051!6.52e-09!53;CL:0000048!1.13e-08!430;CL:0000034!1.79e-08!444;CL:0000723!2.42e-08!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.24e-56;33!CL:0002057;3.24e-56;33!CL:0000473;2.36e-39;39!CL:0000234;2.36e-39;39!CL:0000576;4.78e-28;48!CL:0000766;1.46e-15;69!CL:0002087;5.62e-14;104!CL:0000945;1.89e-09;24!CL:0000738;3.05e-09;136!CL:0000763;2.59e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.57e-52,42;CL:0002057,1.57e-52,42;CL:0000473,1.17e-45,48;CL:0000234,1.17e-45,48;CL:0002194,4.92e-36,59;CL:0000576,4.92e-36,59;CL:0000040,4.92e-36,59;CL:0000559,4.92e-36,59;CL:0002009,8.61e-35,61;CL:0000839,5.23e-32,66;CL:0002087,1.57e-31,115;CL:0000557,1.68e-31,67;CL:0002031,4.16e-30,120;CL:0000766,3.60e-29,72;CL:0000738,5.04e-29,136;CL:0000037,5.84e-23,168;CL:0002032,9.91e-22,161;CL:0000837,9.91e-22,161;CL:0000988,1.21e-21,177;CL:0000763,1.10e-18,108;CL:0000049,1.10e-18,108;CL:0000945,1.87e-09,24;CL:0000826,1.87e-09,24;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.37e-37;42!CL:0000049;2.61e-07;108 | |||
|ontology_enrichment_disease=DOID:0060058!3.65e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:630;3.15e-10;1!DOID:0050177;3.15e-10;1!DOID:0050427;3.15e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.33e-10,1;DOID:0050177,4.33e-10,1;DOID:0050427,4.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.99e-31!102;UBERON:0003061!2.99e-31!102;UBERON:0002371!1.03e-30!80;UBERON:0002193!5.68e-29!112;UBERON:0001474!7.32e-28!86;UBERON:0002405!9.06e-28!115;UBERON:0004765!3.19e-22!101;UBERON:0001434!3.19e-22!101;UBERON:0002384!3.19e-12!375;UBERON:0002204!2.22e-10!167;UBERON:0003081!1.48e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.60e-27,76;UBERON:0001474,2.39e-25,82;UBERON:0004765,6.79e-23,90;UBERON:0002405,4.42e-22,93;UBERON:0002390,7.78e-21,98;UBERON:0003061,7.78e-21,98;UBERON:0001434,2.27e-20,100;UBERON:0002193,1.10e-18,108;UBERON:0002204,3.44e-11,167;UBERON:0003081,9.76e-09,203;UBERON:0002384,1.10e-08,371 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,4.92603536699674,3.69940672174292,0.393364276848904,0,0.619264493264304,0,0,0,0.154934401160603,0.142169232487422,0,1.10799081706375,0.601633342410425,0.651032612147555,0,0,0,1.59938062657521,1.88937971844405,3.15359279544161,3.48643555358527,1.6446715520873,2.16794459626573,0.575384784644301,0,0.709446689665756,0.689491361473237,1.93645405075148,4.06279459783025,3.01187743268168,2.45615535052061,2.69668181334102,2.44867113896722,1.60464513538047,3.19668562899521,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0,1.86846674698672,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0.855038231223746,0,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.368965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.284567373393656,0.478278818186467,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.576169937778896,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | ||
|short_description=p5@SLC43A2 | |||
}} | }} |
Latest revision as of 18:01, 18 September 2015
Short description: | p5@SLC43A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC43A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_AK075196_5end |
EntrezGene: | SLC43A2 |
HGNC: | 23087 |
UniProt: | Q8NBW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.57e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.57e-52 | 42 |
defensive cell | 1.17e-45 | 48 |
phagocyte | 1.17e-45 | 48 |
monopoietic cell | 4.92e-36 | 59 |
monocyte | 4.92e-36 | 59 |
monoblast | 4.92e-36 | 59 |
promonocyte | 4.92e-36 | 59 |
macrophage dendritic cell progenitor | 8.61e-35 | 61 |
myeloid lineage restricted progenitor cell | 5.23e-32 | 66 |
nongranular leukocyte | 1.57e-31 | 115 |
granulocyte monocyte progenitor cell | 1.68e-31 | 67 |
hematopoietic lineage restricted progenitor cell | 4.16e-30 | 120 |
myeloid leukocyte | 3.60e-29 | 72 |
leukocyte | 5.04e-29 | 136 |
hematopoietic stem cell | 5.84e-23 | 168 |
hematopoietic oligopotent progenitor cell | 9.91e-22 | 161 |
hematopoietic multipotent progenitor cell | 9.91e-22 | 161 |
hematopoietic cell | 1.21e-21 | 177 |
myeloid cell | 1.10e-18 | 108 |
common myeloid progenitor | 1.10e-18 | 108 |
lymphocyte of B lineage | 1.87e-09 | 24 |
pro-B cell | 1.87e-09 | 24 |
mesenchymal cell | 2.93e-09 | 354 |
connective tissue cell | 5.13e-09 | 361 |
motile cell | 3.71e-08 | 386 |
multi fate stem cell | 4.21e-07 | 427 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.60e-27 | 76 |
bone element | 2.39e-25 | 82 |
skeletal element | 6.79e-23 | 90 |
immune system | 4.42e-22 | 93 |
hematopoietic system | 7.78e-21 | 98 |
blood island | 7.78e-21 | 98 |
skeletal system | 2.27e-20 | 100 |
hemolymphoid system | 1.10e-18 | 108 |
musculoskeletal system | 3.44e-11 | 167 |
lateral plate mesoderm | 9.76e-09 | 203 |
connective tissue | 1.10e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.33e-10 | 1 |
monogenic disease | 4.33e-10 | 1 |
xeroderma pigmentosum | 4.33e-10 | 1 |