FFCP PHASE1:Hg19::chr17:30814595..30814632,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:30814595..30814632,+
|short_description=p6@CDK5R1
|description=CAGE_peak_6_at_CDK5R1_5end
|association_with_transcript=-5bp_to_uc010wca.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8851 | |EntrezGene=8851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1775 | |HGNC=1775 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_uc010wca.1_5end | |||
|cluster_id=chr17:30814595..30814632,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_6_at_CDK5R1_5end | |||
|id=chr17:30814595..30814632,+ | |||
|ontology_enrichment_celltype=CL:0000148!3.07e-09!10;CL:0000541!3.07e-09!10;CL:0000540!2.38e-07!6;CL:0000031!2.38e-07!6;CL:0000404!2.38e-07!6;CL:0000147!3.43e-07!14;CL:0000047!8.21e-07!8;CL:0000133!8.80e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.65e-12;82!UBERON:0006215;2.78e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.56e-46!82;UBERON:0005743!1.12e-45!86;UBERON:0000073!3.49e-43!94;UBERON:0001016!3.49e-43!94;UBERON:0001049!1.13e-40!57;UBERON:0005068!1.13e-40!57;UBERON:0006241!1.13e-40!57;UBERON:0007135!1.13e-40!57;UBERON:0000955!2.43e-37!69;UBERON:0006238!2.43e-37!69;UBERON:0002616!1.03e-34!59;UBERON:0002780!4.77e-33!41;UBERON:0001890!4.77e-33!41;UBERON:0006240!4.77e-33!41;UBERON:0003080!6.14e-32!42;UBERON:0001869!1.43e-28!32;UBERON:0001893!3.38e-28!34;UBERON:0002020!3.42e-28!34;UBERON:0003528!3.42e-28!34;UBERON:0002791!4.61e-27!33;UBERON:0002619!3.10e-26!22;UBERON:0002346!1.03e-25!90;UBERON:0003075!2.29e-25!86;UBERON:0007284!2.29e-25!86;UBERON:0000956!4.44e-24!25;UBERON:0000203!4.44e-24!25;UBERON:0001950!6.34e-24!20;UBERON:0000924!1.67e-23!173;UBERON:0006601!1.67e-23!173;UBERON:0004121!6.01e-23!169;UBERON:0003056!5.26e-20!61;UBERON:0000033!1.84e-18!123;UBERON:0007023!1.09e-17!115;UBERON:0000153!2.29e-17!129;UBERON:0007811!2.29e-17!129;UBERON:0003076!9.33e-10!15;UBERON:0003057!9.33e-10!15;UBERON:0000200!9.33e-09!6;UBERON:0004733!1.05e-08!12;UBERON:0002028!1.05e-08!12;UBERON:0007277!1.05e-08!12;UBERON:0001871!1.33e-08!7;UBERON:0004732!8.06e-08!13;UBERON:0001872!1.33e-07!5;UBERON:0000349!1.70e-07!5;UBERON:0002021!1.74e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.69e-70;22!UBERON:0001950;4.61e-64;20!UBERON:0000956;1.16e-61;25!UBERON:0000203;1.16e-61;25!UBERON:0001869;2.52e-54;32!UBERON:0002791;2.73e-50;32!UBERON:0003528;4.37e-50;34!UBERON:0002020;4.37e-50;34!UBERON:0001893;7.93e-50;34!UBERON:0002780;4.91e-40;41!UBERON:0001890;4.91e-40;41!UBERON:0000073;5.06e-35;53!UBERON:0002616;5.06e-35;53!UBERON:0000955;4.02e-27;68!UBERON:0001017;6.24e-26;75!UBERON:0000200;2.12e-21;6!UBERON:0001016;2.68e-21;83!UBERON:0001871;1.37e-18;6!UBERON:0001872;4.23e-18;5!UBERON:0000349;7.65e-18;5!UBERON:0002021;1.10e-17;5!UBERON:0001870;2.19e-11;3!UBERON:0011216;2.32e-09;132!UBERON:0007023;3.45e-09;114!UBERON:0002680;1.09e-08;9!UBERON:0001895;1.09e-08;9!UBERON:0002771;2.12e-08;2!UBERON:0001876;2.20e-08;2!UBERON:0002702;2.28e-08;2!UBERON:0001954;5.50e-08;2!UBERON:0003022;5.50e-08;2!UBERON:0002421;5.50e-08;2!UBERON:0002600;5.50e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.18e-70,22;UBERON:0001017,4.71e-68,81;UBERON:0001049,2.14e-66,56;UBERON:0005068,2.14e-66,56;UBERON:0006241,2.14e-66,56;UBERON:0007135,2.14e-66,56;UBERON:0001950,3.12e-64,20;UBERON:0000073,1.97e-62,53;UBERON:0002616,1.97e-62,53;UBERON:0000956,8.50e-62,25;UBERON:0000203,8.50e-62,25;UBERON:0001869,1.19e-61,32;UBERON:0001016,2.30e-60,89;UBERON:0000955,1.32e-59,68;UBERON:0006238,1.32e-59,68;UBERON:0002780,2.14e-59,41;UBERON:0001890,2.14e-59,41;UBERON:0003080,2.14e-59,41;UBERON:0006240,2.14e-59,41;UBERON:0001893,9.82e-58,34;UBERON:0003528,1.87e-57,34;UBERON:0002020,1.87e-57,34;UBERON:0002791,1.27e-56,32;UBERON:0003075,9.65e-43,82;UBERON:0007284,9.65e-43,82;UBERON:0002346,2.33e-40,86;UBERON:0003056,8.77e-38,61;UBERON:0010371,6.85e-32,104;UBERON:0004121,5.85e-27,171;UBERON:0000924,5.85e-27,171;UBERON:0006601,5.85e-27,171;UBERON:0007023,1.02e-26,114;UBERON:0010314,5.01e-25,132;UBERON:0011216,5.80e-22,223;UBERON:0000200,2.72e-21,6;UBERON:0001871,1.42e-18,6;UBERON:0001872,3.96e-18,5;UBERON:0000349,7.68e-18,5;UBERON:0002021,8.23e-18,5;UBERON:0000025,1.90e-15,192;UBERON:0001870,1.98e-11,3;UBERON:0004111,1.33e-10,240;UBERON:0003076,1.28e-09,15;UBERON:0003057,1.28e-09,15;UBERON:0002680,1.05e-08,9;UBERON:0001895,1.05e-08,9;UBERON:0010092,1.05e-08,9;UBERON:0001876,2.05e-08,2;UBERON:0002771,2.36e-08,2;UBERON:0002702,2.54e-08,2;UBERON:0001954,5.70e-08,2;UBERON:0003022,5.70e-08,2;UBERON:0002421,5.70e-08,2;UBERON:0002600,5.70e-08,2;UBERON:0000483,4.23e-07,306;UBERON:0000119,5.98e-07,309 | |||
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|short_description=p6@CDK5R1 | |||
}} | }} |
Latest revision as of 12:34, 19 September 2015
Short description: | p6@CDK5R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDK5R1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -5bp_to_uc010wca.1_5end |
EntrezGene: | CDK5R1 |
HGNC: | 1775 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data