FFCP PHASE1:Hg19::chr17:37309243..37309269,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:37309243..37309269,-
|short_description=p3@PLXDC1
|description=CAGE_peak_3_at_PLXDC1_5end
|association_with_transcript=215bp_to_ENST00000461225,ENST000005...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57125 | |EntrezGene=57125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20945 | |HGNC=20945 | ||
|TSSclassifier=strong | |||
|UniProt=B3KSI0 | |UniProt=B3KSI0 | ||
|association_with_transcript=215bp_to_ENST00000461225,ENST00000539608,uc002hrj.1,uc002hrk.1_5end | |||
|cluster_id=chr17:37309243..37309269,- | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_3_at_PLXDC1_5end | |||
|id=chr17:37309243..37309269,- | |||
|ontology_enrichment_celltype=CL:0000791!9.12e-19!18;CL:0000789!9.12e-19!18;CL:0002420!9.12e-19!18;CL:0002419!9.12e-19!18;CL:0000790!9.12e-19!18;CL:0000625!1.07e-15!11;CL:0000084!1.44e-13!25;CL:0000827!1.44e-13!25;CL:0000838!5.93e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.64e-42;18!CL:0000789;1.64e-42;18!CL:0002419;1.64e-42;18!CL:0000625;3.35e-40;11!CL:0000084;6.03e-30;25!CL:0000784;2.59e-17;3!CL:0000623;2.59e-17;3!CL:0000542;9.76e-12;53!CL:0000624;7.91e-09;6!CL:0000226;2.33e-08;3!CL:0000842;2.33e-08;3!CL:0000222;9.77e-07;1!CL:0000895;9.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.83e-43,18;CL:0000789,5.83e-43,18;CL:0002420,5.83e-43,18;CL:0002419,5.83e-43,18;CL:0000790,5.83e-43,18;CL:0000625,1.04e-40,11;CL:0000084,2.89e-30,25;CL:0000827,2.89e-30,25;CL:0000838,3.40e-21,52;CL:0000542,9.81e-21,53;CL:0000051,9.81e-21,53;CL:0000623,2.83e-17,3;CL:0000825,2.83e-17,3;CL:0000784,2.99e-17,3;CL:0000738,1.81e-13,136;CL:0002087,2.28e-13,115;CL:0000037,4.46e-10,168;CL:0002031,8.48e-10,120;CL:0000988,2.41e-09,177;CL:0000624,7.40e-09,6;CL:0000226,2.33e-08,3;CL:0000842,2.33e-08,3;CL:0000810,8.98e-07,1;CL:0000895,8.98e-07,1;CL:0002436,8.98e-07,1;CL:0002427,8.98e-07,1;CL:0002428,8.98e-07,1;CL:0002429,8.98e-07,1;CL:0002433,8.98e-07,1;CL:0002431,8.98e-07,1;CL:0002432,8.98e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.64e-42;18!CL:0000051;9.76e-12;53!CL:0002427;9.77e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.42e-32!115;UBERON:0001049!1.77e-15!57;UBERON:0005068!1.77e-15!57;UBERON:0006241!1.77e-15!57;UBERON:0007135!1.77e-15!57;UBERON:0002346!1.36e-13!90;UBERON:0002616!1.60e-13!59;UBERON:0002780!2.43e-12!41;UBERON:0001890!2.43e-12!41;UBERON:0006240!2.43e-12!41;UBERON:0000955!2.52e-12!69;UBERON:0006238!2.52e-12!69;UBERON:0003075!2.65e-12!86;UBERON:0007284!2.65e-12!86;UBERON:0001017!6.78e-12!82;UBERON:0003080!7.09e-12!42;UBERON:0005743!9.08e-12!86;UBERON:0000073!1.01e-11!94;UBERON:0001016!1.01e-11!94;UBERON:0001893!2.37e-10!34;UBERON:0002020!2.63e-10!34;UBERON:0003528!2.63e-10!34;UBERON:0002791!1.32e-09!33;UBERON:0002619!1.37e-09!22;UBERON:0001869!3.90e-09!32;UBERON:0003056!2.63e-08!61;UBERON:0001950!4.40e-08!20;UBERON:0000956!5.45e-08!25;UBERON:0000203!5.45e-08!25;UBERON:0000153!3.22e-07!129;UBERON:0007811!3.22e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.14e-13;2!UBERON:0005058;4.14e-13;2!UBERON:0009113;4.14e-13;2!UBERON:0001905;2.04e-12;2!UBERON:0002757;2.04e-12;2!UBERON:0010134;2.04e-12;2!UBERON:0005408;2.04e-12;2!UBERON:0001899;2.04e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.37e-14,4;UBERON:0005058,9.37e-14,4;UBERON:0009113,9.37e-14,4;UBERON:0003295,9.37e-14,4;UBERON:0005562,9.37e-14,4;UBERON:0001905,1.67e-12,2;UBERON:0002757,1.67e-12,2;UBERON:0010134,1.67e-12,2;UBERON:0005408,1.67e-12,2;UBERON:0001899,1.67e-12,2;UBERON:0003351,2.52e-09,6;UBERON:0004177,4.71e-08,7;UBERON:0005057,4.71e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0,1.30206522429511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,2.75393678159366,0.786021525498329,1.43921049299656,0,0.977766799900771,0.946895611469467,0,0,0,0,0,0,0,0,0,0.289803085735052,3.26230438956533,4.28065324943541,2.09071047609954,0.113309342697566,1.53288197440768,0.34362744548263,2.53019692019503,3.50421955756506,0.651083453856419,3.8018081777935,1.95747654801105,0.639933055772092,3.74792179657038,2.8413270245282,1.64225599384209,1.81446068902259,2.40696176205157,3.91025890483557,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,3.81584998888547,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,1.97030760201927,1.07813787429759,3.20857590699371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.431428401637234,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,0,0.714695326373367,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0,0,0.497992903438899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.442317039724898,0.591095237907095,0.438770794307945,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0,0,0,0,0.189559738885464,0.300646838828985,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0.0882561266915003,0.677942222341597,0,0,0.316553979779393,0,0,0.213452994739353,0,0.864542502924636,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0.77380195455795,0.303747783290123,0,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.747511887973863,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,1.001527445652,0,0.221858103073705,0.620964029413834,0,0,0,0.285465333544967,0.470531639396343,0,0,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0.127894371303652,0.215649622793364,0.314531883711793,0,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.478901577171454,0.205116364240755,0,0.414943514785307,0.322951291263702,0,0.196295437002051,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.380494861163441,0,0,0,0,0,1.60710550763486,5.71682327772001,0,0,0,0,0,0.747667062745149,0.328863867814245,0,0,0.313972371402056,0,0,0,0,0,1.28657779517981,0.47404083519818,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.596852325484105,0.713520544665411,0,0.219881033490858,0,0.385870790539723,0,0,0,0,0.392616934229891,0,0,0,0,0.45120521581504,0,0,0,0.160482733378337,0,0,0.286679166302903,0,0.407948941145488,0,0.5290268405154,0,0.924351257262837,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.413731983447581,0,0.23806443146374,6.45889098360061,14.8979314310059,0,0.12729431655633,0.202117188958219,0.653150243690884,0,0.875576689189638,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,3.22038069745642,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0,1.30206522429511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,2.75393678159366,0.786021525498329,1.43921049299656,0,0.977766799900771,0.946895611469467,0,0,0,0,0,0,0,0,0,0.289803085735052,3.26230438956533,4.28065324943541,2.09071047609954,0.113309342697566,1.53288197440768,0.34362744548263,2.53019692019503,3.50421955756506,0.651083453856419,3.8018081777935,1.95747654801105,0.639933055772092,3.74792179657038,2.8413270245282,1.64225599384209,1.81446068902259,2.40696176205157,3.91025890483557,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,3.81584998888547,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,1.97030760201927,1.07813787429759,3.20857590699371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.431428401637234,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,0,0.714695326373367,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0,0,0.497992903438899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.442317039724898,0.591095237907095,0.438770794307945,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0,0,0,0,0.189559738885464,0.300646838828985,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0.0882561266915003,0.677942222341597,0,0,0.316553979779393,0,0,0.213452994739353,0,0.864542502924636,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0.77380195455795,0.303747783290123,0,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.747511887973863,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,1.001527445652,0,0.221858103073705,0.620964029413834,0,0,0,0.285465333544967,0.470531639396343,0,0,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0.127894371303652,0.215649622793364,0.314531883711793,0,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.478901577171454,0.205116364240755,0,0.414943514785307,0.322951291263702,0,0.196295437002051,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.380494861163441,0,0,0,0,0,1.60710550763486,5.71682327772001,0,0,0,0,0,0.747667062745149,0.328863867814245,0,0,0.313972371402056,0,0,0,0,0,1.28657779517981,0.47404083519818,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.596852325484105,0.713520544665411,0,0.219881033490858,0,0.385870790539723,0,0,0,0,0.392616934229891,0,0,0,0,0.45120521581504,0,0,0,0.160482733378337,0,0,0.286679166302903,0,0.407948941145488,0,0.5290268405154,0,0.924351257262837,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.413731983447581,0,0.23806443146374,6.45889098360061,14.8979314310059,0,0.12729431655633,0.202117188958219,0.653150243690884,0,0.875576689189638,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,3.22038069745642,0 | ||
|short_description=p3@PLXDC1 | |||
}} | }} |
Latest revision as of 21:13, 19 September 2015
Short description: | p3@PLXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLXDC1_5end |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | 215bp_to_ENST00000461225, ENST00000539608, uc002hrj.1, uc002hrk.1_5end |
EntrezGene: | PLXDC1 |
HGNC: | 20945 |
UniProt: | B3KSI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 9.37e-14 | 4 |
hemolymphoid system gland | 9.37e-14 | 4 |
thymic region | 9.37e-14 | 4 |
pharyngeal gland | 9.37e-14 | 4 |
thymus primordium | 9.37e-14 | 4 |
pineal body | 1.67e-12 | 2 |
regional part of epithalamus | 1.67e-12 | 2 |
secretory circumventricular organ | 1.67e-12 | 2 |
circumventricular organ | 1.67e-12 | 2 |
epithalamus | 1.67e-12 | 2 |
pharyngeal epithelium | 2.52e-09 | 6 |
hemopoietic organ | 4.71e-08 | 7 |
immune organ | 4.71e-08 | 7 |