FFCP PHASE1:Hg19::chr17:38476670..38476683,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:38476670..38476683,+
|short_description=p@chr17:38476670..38476683,+
|description=CAGE_peak_at_chr17:38476670..38476683,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38476670..38476683,+ | |||
|coexpression_cluster_id=C325 | |||
|description=CAGE_peak_at_chr17:38476670..38476683,+ | |||
|id=chr17:38476670..38476683,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.90e-69!76;CL:0002057!8.13e-66!42;CL:0000738!1.27e-61!140;CL:0000860!6.88e-61!45;CL:0000839!1.83e-50!70;CL:0000557!1.23e-49!71;CL:0000037!5.17e-48!172;CL:0000566!5.17e-48!172;CL:0000988!9.82e-45!182;CL:0002032!2.71e-44!165;CL:0000837!2.71e-44!165;CL:0002031!3.02e-44!124;CL:0000763!5.65e-44!112;CL:0000049!5.65e-44!112;CL:0002087!1.11e-43!119;CL:0002194!2.55e-43!63;CL:0000576!2.55e-43!63;CL:0000040!2.55e-43!63;CL:0000559!2.55e-43!63;CL:0002009!9.33e-42!65;CL:0000094!2.67e-21!8;CL:0000134!7.15e-17!358;CL:0002320!2.57e-16!365;CL:0000081!3.48e-15!11;CL:0000219!2.34e-14!390;CL:0000048!8.81e-13!430;CL:0000723!1.95e-12!436;CL:0000034!5.44e-12!444;CL:0002274!1.02e-11!5;CL:0000457!1.02e-11!5;CL:0002191!1.02e-11!5;CL:0000097!1.02e-11!5;CL:0000831!1.02e-11!5;CL:0002028!1.02e-11!5;CL:0000767!1.29e-11!3;CL:0000842!2.72e-10!3;CL:0000623!3.42e-10!3;CL:0000825!3.42e-10!3;CL:0000771!2.25e-08!2;CL:0000224!7.96e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.58e-25;33!CL:0002057;1.58e-25;33!CL:0000771;4.24e-21;2!CL:0000094;1.55e-20;8!CL:0000766;1.85e-20;69!CL:0000097;3.89e-19;5!CL:0000473;1.08e-17;39!CL:0000234;1.08e-17;39!CL:0000576;5.35e-17;48!CL:0000081;5.19e-15;11!CL:0000767;1.23e-14;3!CL:0000763;3.03e-12;100!CL:0000163;6.91e-11;9!CL:0002393;1.38e-07;6!CL:0002397;1.38e-07;6!CL:0000738;4.11e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.08e-46,72;CL:0000860,5.12e-32,42;CL:0002057,5.12e-32,42;CL:0000839,3.84e-31,66;CL:0000557,1.19e-30,67;CL:0000763,1.81e-30,108;CL:0000049,1.81e-30,108;CL:0000473,8.40e-28,48;CL:0000234,8.40e-28,48;CL:0000738,1.66e-26,136;CL:0002032,5.08e-22,161;CL:0000837,5.08e-22,161;CL:0002194,6.78e-22,59;CL:0000576,6.78e-22,59;CL:0000040,6.78e-22,59;CL:0000559,6.78e-22,59;CL:0002009,3.93e-21,61;CL:0000771,5.20e-21,2;CL:0000037,5.31e-21,168;CL:0000094,1.99e-20,8;CL:0000988,8.29e-20,177;CL:0000097,3.67e-19,5;CL:0002028,3.67e-19,5;CL:0002031,1.19e-18,120;CL:0000081,6.22e-15,11;CL:0000767,1.51e-14,3;CL:0002087,2.18e-12,115;CL:0000163,6.69e-11,9;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.61e-21;42!CL:0000049;8.82e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.22e-43!80;UBERON:0002390!8.53e-41!102;UBERON:0003061!8.53e-41!102;UBERON:0001474!1.69e-39!86;UBERON:0002193!2.61e-36!112;UBERON:0004765!2.37e-32!101;UBERON:0001434!2.37e-32!101;UBERON:0002405!2.35e-27!115;UBERON:0002204!2.66e-17!167;UBERON:0002384!1.47e-15!375;UBERON:0003081!2.86e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.17e-27,76;UBERON:0001474,1.02e-24,82;UBERON:0004765,2.39e-22,90;UBERON:0002405,1.45e-21,93;UBERON:0002390,2.32e-20,98;UBERON:0003061,2.32e-20,98;UBERON:0001434,6.50e-20,100;UBERON:0002193,2.76e-18,108;UBERON:0002204,4.77e-11,167;UBERON:0003081,1.12e-08,203;UBERON:0002384,4.95e-08,371 | |||
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| ||
|short_description=p@chr17:38476670..38476683,+ | |||
}} | }} |
Latest revision as of 16:22, 25 July 2015
Short description: | p@chr17:38476670..38476683, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38476670..38476683, + |
Coexpression cluster: | C325_Mast_Eosinophils_CD14_immature_Basophils_granulocyte_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.08e-46 | 72 |
classical monocyte | 5.12e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.12e-32 | 42 |
myeloid lineage restricted progenitor cell | 3.84e-31 | 66 |
granulocyte monocyte progenitor cell | 1.19e-30 | 67 |
myeloid cell | 1.81e-30 | 108 |
common myeloid progenitor | 1.81e-30 | 108 |
defensive cell | 8.40e-28 | 48 |
phagocyte | 8.40e-28 | 48 |
leukocyte | 1.66e-26 | 136 |
hematopoietic oligopotent progenitor cell | 5.08e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-22 | 161 |
monopoietic cell | 6.78e-22 | 59 |
monocyte | 6.78e-22 | 59 |
monoblast | 6.78e-22 | 59 |
promonocyte | 6.78e-22 | 59 |
macrophage dendritic cell progenitor | 3.93e-21 | 61 |
eosinophil | 5.20e-21 | 2 |
hematopoietic stem cell | 5.31e-21 | 168 |
granulocyte | 1.99e-20 | 8 |
hematopoietic cell | 8.29e-20 | 177 |
mast cell | 3.67e-19 | 5 |
basophil mast progenitor cell | 3.67e-19 | 5 |
hematopoietic lineage restricted progenitor cell | 1.19e-18 | 120 |
blood cell | 6.22e-15 | 11 |
basophil | 1.51e-14 | 3 |
nongranular leukocyte | 2.18e-12 | 115 |
endocrine cell | 6.69e-11 | 9 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.17e-27 | 76 |
bone element | 1.02e-24 | 82 |
skeletal element | 2.39e-22 | 90 |
immune system | 1.45e-21 | 93 |
hematopoietic system | 2.32e-20 | 98 |
blood island | 2.32e-20 | 98 |
skeletal system | 6.50e-20 | 100 |
hemolymphoid system | 2.76e-18 | 108 |
musculoskeletal system | 4.77e-11 | 167 |
lateral plate mesoderm | 1.12e-08 | 203 |
connective tissue | 4.95e-08 | 371 |