FFCP PHASE1:Hg19::chr1:32042764..32042776,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64129 | |EntrezGene=64129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19168 | |HGNC=19168 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=129bp_to_ENST00000481165_5end | |association_with_transcript=129bp_to_ENST00000481165_5end | ||
|cluster_id=chr1:32042764..32042776,+ | |||
|description=CAGE_peak_6_at_TINAGL1_5end | |description=CAGE_peak_6_at_TINAGL1_5end | ||
|id=chr1:32042764..32042776,+ | |id=chr1:32042764..32042776,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.23e-24!254;CL:0000213!4.52e-18!57;CL:0000215!4.52e-18!57;CL:0000076!6.15e-18!62;CL:0000115!3.64e-14!35;CL:0002139!5.91e-14!24;CL:0002078!7.32e-13!44;CL:1000497!6.58e-12!18;CL:0002518!6.58e-12!18;CL:0000071!1.59e-11!18;CL:0002546!1.59e-11!18;CL:0000220!3.21e-11!246;CL:0002321!6.25e-11!248;CL:1000449!4.84e-10!16;CL:1000612!4.21e-09!7;CL:1000746!4.21e-09!7;CL:0002076!1.45e-08!43;CL:0000222!3.83e-08!119;CL:1000413!7.64e-08!9;CL:0002681!9.41e-08!13;CL:0002584!9.41e-08!13;CL:0000223!2.41e-07!59;CL:0000077!5.49e-07!19 | |ontology_enrichment_celltype=CL:0000066!1.23e-24!254;CL:0000213!4.52e-18!57;CL:0000215!4.52e-18!57;CL:0000076!6.15e-18!62;CL:0000115!3.64e-14!35;CL:0002139!5.91e-14!24;CL:0002078!7.32e-13!44;CL:1000497!6.58e-12!18;CL:0002518!6.58e-12!18;CL:0000071!1.59e-11!18;CL:0002546!1.59e-11!18;CL:0000220!3.21e-11!246;CL:0002321!6.25e-11!248;CL:1000449!4.84e-10!16;CL:1000612!4.21e-09!7;CL:1000746!4.21e-09!7;CL:0002076!1.45e-08!43;CL:0000222!3.83e-08!119;CL:1000413!7.64e-08!9;CL:0002681!9.41e-08!13;CL:0002584!9.41e-08!13;CL:0000223!2.41e-07!59;CL:0000077!5.49e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:1000746;4.00e-32;7!CL:1000612;4.00e-32;7!CL:1000449;1.12e-25;15!CL:1000497;1.58e-22;17!CL:0002518;1.58e-22;17!CL:0002188;6.95e-21;5!CL:0002681;1.50e-18;12!CL:0002584;1.50e-18;12!CL:0000650;2.70e-13;2!CL:1000500;2.70e-13;2!CL:1000618;2.70e-13;2!CL:1001318;2.70e-13;2!CL:0002173;2.70e-13;2!CL:0000115;5.09e-11;36!CL:1000507;4.80e-10;10!CL:1000494;4.80e-10;10!CL:0002541;8.73e-10;3!CL:0000313;1.74e-07;1!CL:0000669;4.47e-07;4!CL:0002078;5.11e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,5.58e-32,7;CL:1000612,5.58e-32,7;CL:1000449,1.24e-25,15;CL:1000497,1.73e-22,17;CL:0002518,1.73e-22,17;CL:0002188,5.99e-21,5;CL:0002681,1.82e-18,12;CL:0002584,1.82e-18,12;CL:0000650,4.75e-13,2;CL:1000500,4.75e-13,2;CL:1000618,4.75e-13,2;CL:1001318,4.75e-13,2;CL:0002173,4.75e-13,2;CL:0000115,4.87e-13,36;CL:0002078,3.90e-10,45;CL:1000507,5.56e-10,10;CL:1000494,5.56e-10,10;CL:0002541,8.75e-10,3;CL:0000213,2.36e-09,58;CL:0000215,2.36e-09,58;CL:0000313,2.80e-07,1;CL:0000669,5.90e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.56e-08;1!UBERON:0008801;1.74e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001008!6.90e-12!45;UBERON:0003887!1.02e-11!21;UBERON:0001986!1.59e-11!18;UBERON:0004638!1.59e-11!18;UBERON:0004852!1.59e-11!18;UBERON:0003103!1.76e-11!69;UBERON:0003914!2.09e-11!118;UBERON:0000080!2.19e-11!18;UBERON:0002120!2.19e-11!18;UBERON:0004875!2.19e-11!18;UBERON:0005721!2.19e-11!18;UBERON:0005754!2.19e-11!18;UBERON:0007297!2.19e-11!18;UBERON:0006554!3.34e-11!44;UBERON:0000477!6.63e-11!286;UBERON:0000489!9.76e-11!32;UBERON:0006555!1.11e-10!17;UBERON:0005103!1.11e-10!17;UBERON:0000083!1.11e-10!17;UBERON:0009201!1.11e-10!17;UBERON:0004819!1.11e-10!17;UBERON:0006553!1.11e-10!17;UBERON:0003074!1.11e-10!17;UBERON:0003060!1.11e-10!17;UBERON:0003064!2.46e-10!37;UBERON:0002113!3.07e-10!27;UBERON:0003918!3.07e-10!27;UBERON:0005095!3.07e-10!27;UBERON:0007687!3.07e-10!27;UBERON:0004211!4.84e-10!16;UBERON:0001285!4.84e-10!16;UBERON:0007684!4.84e-10!16;UBERON:0003220!4.84e-10!16;UBERON:0004208!4.84e-10!16;UBERON:0004876!9.64e-10!20;UBERON:0004111!1.25e-09!241;UBERON:0002049!1.64e-09!79;UBERON:0007798!1.64e-09!79;UBERON:0000074!4.21e-09!7;UBERON:0001229!4.21e-09!7;UBERON:0001230!4.21e-09!7;UBERON:0005749!4.21e-09!7;UBERON:0004199!4.21e-09!7;UBERON:0004209!4.21e-09!7;UBERON:0004198!4.21e-09!7;UBERON:0005177!5.27e-09!107;UBERON:0009569!8.61e-09!113;UBERON:0000487!1.60e-08!22;UBERON:0000464!1.94e-08!104;UBERON:0000058!2.85e-08!26;UBERON:0000055!3.23e-08!69;UBERON:0000466!6.03e-08!126;UBERON:0005172!6.48e-08!55;UBERON:0005173!6.48e-08!55;UBERON:0003915!7.64e-08!9;UBERON:0004700!7.64e-08!9;UBERON:0001917!7.64e-08!9;UBERON:0001225!9.41e-08!13;UBERON:0008987!9.41e-08!13;UBERON:0000467!2.46e-07!625;UBERON:0000480!2.96e-07!626;UBERON:0001009!3.80e-07!113;UBERON:0001981!4.19e-07!60;UBERON:0007500!4.19e-07!60;UBERON:0004537!4.19e-07!60;UBERON:0006965!4.19e-07!60;UBERON:0001851!4.56e-07!16;UBERON:0006914!6.10e-07!25;UBERON:0002553!6.59e-07!70;UBERON:0002417!6.97e-07!61;UBERON:0000916!6.97e-07!61;UBERON:0004119!9.43e-07!169;UBERON:0000925!9.43e-07!169;UBERON:0006595!9.43e-07!169 | |ontology_enrichment_uberon=UBERON:0001008!6.90e-12!45;UBERON:0003887!1.02e-11!21;UBERON:0001986!1.59e-11!18;UBERON:0004638!1.59e-11!18;UBERON:0004852!1.59e-11!18;UBERON:0003103!1.76e-11!69;UBERON:0003914!2.09e-11!118;UBERON:0000080!2.19e-11!18;UBERON:0002120!2.19e-11!18;UBERON:0004875!2.19e-11!18;UBERON:0005721!2.19e-11!18;UBERON:0005754!2.19e-11!18;UBERON:0007297!2.19e-11!18;UBERON:0006554!3.34e-11!44;UBERON:0000477!6.63e-11!286;UBERON:0000489!9.76e-11!32;UBERON:0006555!1.11e-10!17;UBERON:0005103!1.11e-10!17;UBERON:0000083!1.11e-10!17;UBERON:0009201!1.11e-10!17;UBERON:0004819!1.11e-10!17;UBERON:0006553!1.11e-10!17;UBERON:0003074!1.11e-10!17;UBERON:0003060!1.11e-10!17;UBERON:0003064!2.46e-10!37;UBERON:0002113!3.07e-10!27;UBERON:0003918!3.07e-10!27;UBERON:0005095!3.07e-10!27;UBERON:0007687!3.07e-10!27;UBERON:0004211!4.84e-10!16;UBERON:0001285!4.84e-10!16;UBERON:0007684!4.84e-10!16;UBERON:0003220!4.84e-10!16;UBERON:0004208!4.84e-10!16;UBERON:0004876!9.64e-10!20;UBERON:0004111!1.25e-09!241;UBERON:0002049!1.64e-09!79;UBERON:0007798!1.64e-09!79;UBERON:0000074!4.21e-09!7;UBERON:0001229!4.21e-09!7;UBERON:0001230!4.21e-09!7;UBERON:0005749!4.21e-09!7;UBERON:0004199!4.21e-09!7;UBERON:0004209!4.21e-09!7;UBERON:0004198!4.21e-09!7;UBERON:0005177!5.27e-09!107;UBERON:0009569!8.61e-09!113;UBERON:0000487!1.60e-08!22;UBERON:0000464!1.94e-08!104;UBERON:0000058!2.85e-08!26;UBERON:0000055!3.23e-08!69;UBERON:0000466!6.03e-08!126;UBERON:0005172!6.48e-08!55;UBERON:0005173!6.48e-08!55;UBERON:0003915!7.64e-08!9;UBERON:0004700!7.64e-08!9;UBERON:0001917!7.64e-08!9;UBERON:0001225!9.41e-08!13;UBERON:0008987!9.41e-08!13;UBERON:0000467!2.46e-07!625;UBERON:0000480!2.96e-07!626;UBERON:0001009!3.80e-07!113;UBERON:0001981!4.19e-07!60;UBERON:0007500!4.19e-07!60;UBERON:0004537!4.19e-07!60;UBERON:0006965!4.19e-07!60;UBERON:0001851!4.56e-07!16;UBERON:0006914!6.10e-07!25;UBERON:0002553!6.59e-07!70;UBERON:0002417!6.97e-07!61;UBERON:0000916!6.97e-07!61;UBERON:0004119!9.43e-07!169;UBERON:0000925!9.43e-07!169;UBERON:0006595!9.43e-07!169 | ||
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| ||
|short_description=p6@TINAGL1 | |short_description=p6@TINAGL1 | ||
}} | }} |
Latest revision as of 13:35, 17 September 2015
Short description: | p6@TINAGL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TINAGL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 129bp_to_ENST00000481165_5end |
EntrezGene: | TINAGL1 |
HGNC: | 19168 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 5.58e-32 | 7 |
kidney corpuscule cell | 5.58e-32 | 7 |
epithelial cell of nephron | 1.24e-25 | 15 |
kidney cell | 1.73e-22 | 17 |
kidney epithelial cell | 1.73e-22 | 17 |
glomerular endothelial cell | 5.99e-21 | 5 |
kidney cortical cell | 1.82e-18 | 12 |
renal cortical epithelial cell | 1.82e-18 | 12 |
mesangial cell | 4.75e-13 | 2 |
kidney interstitial cell | 4.75e-13 | 2 |
juxtaglomerular complex cell | 4.75e-13 | 2 |
renal interstitial pericyte | 4.75e-13 | 2 |
extraglomerular mesangial cell | 4.75e-13 | 2 |
endothelial cell | 4.87e-13 | 36 |
meso-epithelial cell | 3.90e-10 | 45 |
kidney tubule cell | 5.56e-10 | 10 |
nephron tubule epithelial cell | 5.56e-10 | 10 |
chorionic membrane mesenchymal stem cell | 8.75e-10 | 3 |
lining cell | 2.36e-09 | 58 |
barrier cell | 2.36e-09 | 58 |
serous secreting cell | 2.80e-07 | 1 |
pericyte cell | 5.90e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.80e-07 | 1 |